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The map label for this gene is yfdR [C]

Identifier: 209548615

GI number: 209548615

Start: 1033699

End: 1034307

Strand: Reverse

Name: yfdR [C]

Synonym: Rleg2_1012

Alternate gene names: 209548615

Gene position: 1034307-1033699 (Counterclockwise)

Preceding gene: 209548616

Following gene: 209548614

Centisome position: 22.79

GC content: 64.53

Gene sequence:

>609_bases
GTGACAACGGCGAAAGCTCCCCGCGCCTGGCAACGCATGCTGTCCGGGCGCAGGCTCGACCTGCTCGACCCCTCGCCGCT
CGATGTGGAACTGATCGACATTGCTCATGGGCTGGCGCGTGTTGCCCGCTGGAACGGCCAGACGTCAGGCGATCATGCGT
TTTCGGTGGCGCAGCACAGCCTCGTCGTCGAAGACATTTTCCGCCGCGTCAATGATGCCTCCCCGCAGGAGTGCCTGATG
GCGCTGCTGCATGACGCACCCGAATATGTGATTGGCGATATGATCTCGCCGTTCAAATCGGTGGTCGGCGGCGGCTACAA
GACGGTGGAAAAGCGGCTGGAGGCCGCCGTGCACCTGCGCTTCGGCCTGCCGCCGCATCCCTCGCGCGACCTCAAGGACC
GAATCAAGAAGGCCGATACGATCGCCGCCTATTTCGAGGCGACGGTGCTCGCCGGCTTTACACCGGCCGAGGCACAGAAG
TTCTTCGGCCAGCCGCGCGGCGTCAGCAGGGAGATGCTGATGATCGAACCGCTGCCGGCAATCGAAGCCCAGAGGCTGTT
CTGCGAGCGCTTCGCGGCGATCGAGACCGCGCGGGAGATGGTCTCGTGA

Upstream 100 bases:

>100_bases
CCGCCGGCACGCCGCTGCTCGCCGGCGAGACACCCGTTTCCCTCGTCCTGCCGCAATGGTCCGGCCTTGTCTTTCCCACC
AGCGCCGACGAGGCCAGCGC

Downstream 100 bases:

>100_bases
GTTTCATCGTCGTCTCGCCGCTATCGCGCATCGCAGAGATGGCCGTGCGCCACAAGGCGCGTGAGATGATCAGCCTGATC
GCCAAGGAGCAGGCCTTTCA

Product: hydrolase protein

Products: NA

Alternate protein names: ORF5 [H]

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MTTAKAPRAWQRMLSGRRLDLLDPSPLDVELIDIAHGLARVARWNGQTSGDHAFSVAQHSLVVEDIFRRVNDASPQECLM
ALLHDAPEYVIGDMISPFKSVVGGGYKTVEKRLEAAVHLRFGLPPHPSRDLKDRIKKADTIAAYFEATVLAGFTPAEAQK
FFGQPRGVSREMLMIEPLPAIEAQRLFCERFAAIETAREMVS

Sequences:

>Translated_202_residues
MTTAKAPRAWQRMLSGRRLDLLDPSPLDVELIDIAHGLARVARWNGQTSGDHAFSVAQHSLVVEDIFRRVNDASPQECLM
ALLHDAPEYVIGDMISPFKSVVGGGYKTVEKRLEAAVHLRFGLPPHPSRDLKDRIKKADTIAAYFEATVLAGFTPAEAQK
FFGQPRGVSREMLMIEPLPAIEAQRLFCERFAAIETAREMVS
>Mature_201_residues
TTAKAPRAWQRMLSGRRLDLLDPSPLDVELIDIAHGLARVARWNGQTSGDHAFSVAQHSLVVEDIFRRVNDASPQECLMA
LLHDAPEYVIGDMISPFKSVVGGGYKTVEKRLEAAVHLRFGLPPHPSRDLKDRIKKADTIAAYFEATVLAGFTPAEAQKF
FGQPRGVSREMLMIEPLPAIEAQRLFCERFAAIETAREMVS

Specific function: Unknown

COG id: COG1896

COG function: function code R; Predicted hydrolases of HD superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082090, Length=193, Percent_Identity=27.979274611399, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003607 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22454; Mature: 22323

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTAKAPRAWQRMLSGRRLDLLDPSPLDVELIDIAHGLARVARWNGQTSGDHAFSVAQHS
CCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
LVVEDIFRRVNDASPQECLMALLHDAPEYVIGDMISPFKSVVGGGYKTVEKRLEAAVHLR
HHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
FGLPPHPSRDLKDRIKKADTIAAYFEATVLAGFTPAEAQKFFGQPRGVSREMLMIEPLPA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCEEEECCCCH
IEAQRLFCERFAAIETAREMVS
HHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
TTAKAPRAWQRMLSGRRLDLLDPSPLDVELIDIAHGLARVARWNGQTSGDHAFSVAQHS
CCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
LVVEDIFRRVNDASPQECLMALLHDAPEYVIGDMISPFKSVVGGGYKTVEKRLEAAVHLR
HHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
FGLPPHPSRDLKDRIKKADTIAAYFEATVLAGFTPAEAQKFFGQPRGVSREMLMIEPLPA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCEEEECCCCH
IEAQRLFCERFAAIETAREMVS
HHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8282711 [H]