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The map label for this gene is recO [H]

Identifier: 209548606

GI number: 209548606

Start: 1025037

End: 1025807

Strand: Direct

Name: recO [H]

Synonym: Rleg2_1003

Alternate gene names: 209548606

Gene position: 1025037-1025807 (Clockwise)

Preceding gene: 209548605

Following gene: 209548607

Centisome position: 22.59

GC content: 66.41

Gene sequence:

>771_bases
ATGCAGTGGCAGGATCATGCGATCATCCTGGGCGTCAAGCGCCACGGCGAGACGAGTGTCATCGCCGAGGTGATGACGCG
CGATCGCGGCCGCCATCTCGGCCTGGTGCGCTCCGGCCGGTCCCGCGCCATGCAGCCGGTGCTGCAGGCCGGCAATGCCG
TGGAGGTCATCTGGCGCGCCAGGTTGGACGAACATCTCGGCGAATTCCGCGTCGAACCGGTGACATTGCGCGCCGCGCGC
CTGATGGAAACGGCGACCGCCGTCTACGGCGTTCAGGCGATGGGCGCGTTGCTGCGGCTGCTGCCGGAGCGTGACCCGCA
TCCGCACCTCTTCGATGCGCTGGAGGTCATCCTCGATCACCTGCACAACCCGGCCGATGCCGGCGAACTCTTCGTGCGTT
TCGAGCTTGCGGTGCTGAACGATCTCGGCTTCGGTCTCGATCTCGCCGAATGCGCCGCGACTGGCGCCCGTTCCGATCTC
GCCTATGTCTCGCCGAAATCCGGCCGCGCCGTCAGCCGCAGCGCCGGTGCCCCCTGGGCGGACAAGATGCTGCTCCTGCC
GCCGTTTCTCGGTATCGAAGGCAATCATGCCGCCGACTTCGACAGTCTCTCGGCGGCATTCCGCCTGACGGGGTTCTTTC
TGCATCGCCATGTCTATGAACCGCGCGGCATCGAAGCCGCGGCAGCCCGCGACGGCTTCGTTCAGGCGGCACTCAAGGCG
CTCAATCCAGCCTTGCGGACGCTTTCCGGTCCGAATGACATTTCCGCCTGA

Upstream 100 bases:

>100_bases
CGGCCGGTCGACCATCCGACTCCGTTTGAGCCAACAGAATGCTTCAATCTAACCAGGAAAGGCTCTAGGATGGATTCGTC
AGCCGCAAGGACTTCTTTCG

Downstream 100 bases:

>100_bases
GCTCGGTTTTTTACCGGTGCAAAACATCCTCCGGATTTGGCGGTTTACCCGCATGGGAGCCCTTCCTATGTCTTGGAAGA
CTGCCAGCCAAGGAGGATCC

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O [H]

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MQWQDHAIILGVKRHGETSVIAEVMTRDRGRHLGLVRSGRSRAMQPVLQAGNAVEVIWRARLDEHLGEFRVEPVTLRAAR
LMETATAVYGVQAMGALLRLLPERDPHPHLFDALEVILDHLHNPADAGELFVRFELAVLNDLGFGLDLAECAATGARSDL
AYVSPKSGRAVSRSAGAPWADKMLLLPPFLGIEGNHAADFDSLSAAFRLTGFFLHRHVYEPRGIEAAAARDGFVQAALKA
LNPALRTLSGPNDISA

Sequences:

>Translated_256_residues
MQWQDHAIILGVKRHGETSVIAEVMTRDRGRHLGLVRSGRSRAMQPVLQAGNAVEVIWRARLDEHLGEFRVEPVTLRAAR
LMETATAVYGVQAMGALLRLLPERDPHPHLFDALEVILDHLHNPADAGELFVRFELAVLNDLGFGLDLAECAATGARSDL
AYVSPKSGRAVSRSAGAPWADKMLLLPPFLGIEGNHAADFDSLSAAFRLTGFFLHRHVYEPRGIEAAAARDGFVQAALKA
LNPALRTLSGPNDISA
>Mature_256_residues
MQWQDHAIILGVKRHGETSVIAEVMTRDRGRHLGLVRSGRSRAMQPVLQAGNAVEVIWRARLDEHLGEFRVEPVTLRAAR
LMETATAVYGVQAMGALLRLLPERDPHPHLFDALEVILDHLHNPADAGELFVRFELAVLNDLGFGLDLAECAATGARSDL
AYVSPKSGRAVSRSAGAPWADKMLLLPPFLGIEGNHAADFDSLSAAFRLTGFFLHRHVYEPRGIEAAAARDGFVQAALKA
LNPALRTLSGPNDISA

Specific function: Involved in DNA repair and recF pathway recombination [H]

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717 [H]

Pfam domain/function: PF02565 RecO; PF11967 RecO_N [H]

EC number: NA

Molecular weight: Translated: 27858; Mature: 27858

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQWQDHAIILGVKRHGETSVIAEVMTRDRGRHLGLVRSGRSRAMQPVLQAGNAVEVIWRA
CCCCCCEEEEEECCCCCHHHHHHHHHHCCCCEECHHHCCHHHHHHHHHHCCCHHHHHHHH
RLDEHLGEFRVEPVTLRAARLMETATAVYGVQAMGALLRLLPERDPHPHLFDALEVILDH
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
LHNPADAGELFVRFELAVLNDLGFGLDLAECAATGARSDLAYVSPKSGRAVSRSAGAPWA
CCCCCCCCCEEHHHHHHHHHHCCCCCCHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCC
DKMLLLPPFLGIEGNHAADFDSLSAAFRLTGFFLHRHVYEPRGIEAAAARDGFVQAALKA
CCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
LNPALRTLSGPNDISA
HHHHHHHCCCCCCCCC
>Mature Secondary Structure
MQWQDHAIILGVKRHGETSVIAEVMTRDRGRHLGLVRSGRSRAMQPVLQAGNAVEVIWRA
CCCCCCEEEEEECCCCCHHHHHHHHHHCCCCEECHHHCCHHHHHHHHHHCCCHHHHHHHH
RLDEHLGEFRVEPVTLRAARLMETATAVYGVQAMGALLRLLPERDPHPHLFDALEVILDH
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
LHNPADAGELFVRFELAVLNDLGFGLDLAECAATGARSDLAYVSPKSGRAVSRSAGAPWA
CCCCCCCCCEEHHHHHHHHHHCCCCCCHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCC
DKMLLLPPFLGIEGNHAADFDSLSAAFRLTGFFLHRHVYEPRGIEAAAARDGFVQAALKA
CCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
LNPALRTLSGPNDISA
HHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA