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The map label for this gene is 209548473

Identifier: 209548473

GI number: 209548473

Start: 889158

End: 890303

Strand: Direct

Name: 209548473

Synonym: Rleg2_0870

Alternate gene names: NA

Gene position: 889158-890303 (Clockwise)

Preceding gene: 209548472

Following gene: 209548476

Centisome position: 19.59

GC content: 63.26

Gene sequence:

>1146_bases
GTGCGGCATGACAATAGCGTCTTTCATGATCTGTTGAAGCGGATTCCGTGGACGGCTTTTGAAAGACTTGTGGAGGAGCA
TCAGGCCGATAAGCATGTGCGGCGGCTGTCGACCAAGAGCCAGTTGATCGCCCTGCTTTATGGCCAGCTTGCCGGTGCCA
CCAGCCTGCGTGAGATCGTTGGCTCCCTGCAGAGCCACGGCACCCGCCTTTACCATCTCGGCGCTCGTCCGGTGTCACGC
TCGACATTCGCCGATGCCAATGGCCTGCGTCCGAGCGCCGTTTTTGCCGAGTTGTTCGCGCAGATGGTGGCCCGCGCCGG
GCGCGGGCTCAAGCGGGCCGTCGGCGAGGCGGTCTATCTAATCGACGGCAGCAGTCTGAGCCTTGCCGGGGCGGGATCGC
AGTGGGCCCGCTTTTCCGATCAGGCCTGCGGCGCCAAGATGCACGTCGTCTACGATGCCAACGCCGAACGTCCGATCTAT
GCGGCCGTCACCCCGGCCAATGTCAATGACATCACCGCGGCCAAGGAGATGCCGATCGAGGCAGGCGCCACCTATGTCTT
CGATCTCGGCTACTACGACTTCGGCTGGTGGGCGAAGCTCAATGCCGCCGGCTGCCGCATCGTCACCCGCCTCAAATCCC
ACACGAGACTGACGGTGAGCGCCGAGCAGGCGGTGAACGAGGATGCCGGCATCCTGTTCGACCGTATCGGCCTGCTGCCG
CAGCGCCAGGCCAAGAGTCGCCGCAACCCAATGAACCGGCCGGTGCGCGAGATCGGCGTGCGGATCGAAACCGGCAAGGT
GTTGCGCATCTTCTCCAACGATCTTACCGCCCCGGCCGAGGAGATCGCCGCGCTTTACAAGCGTCGCTGGGCGATCGAAC
TGTTCTTCCGCTGGGTCAAGCAGACGCTGAAGATCCGCCATTTCCTCGGCAACAACGAAAATGCCGTGCGCATCCAGGTC
GCCGTCGCCCTGATTGCCTATCTGCTGCTGCAGATGGCAAAGGCCGACCAGACCAGCGTCACAAGCCCGCTGGCATTCGC
CCGCCTGGTGCGCGCCAACCTCATGCACCGCAAAAGGATCGACCGCCTGCTGAAACCAAGCCACAGCCCTCCCATCAGTC
CCGCCCAGATGAGCCTCCAATGGTGA

Upstream 100 bases:

>100_bases
GCTGTCCGGTTTAAAAATGGTGGACAGGGCGCACGGTGTTGATTCTACTCATGTTCGAGCGTTTGGCGACGTTCCCGGAC
ATGAAAAGAGGAGCAACACC

Downstream 100 bases:

>100_bases
CAAAATTTAAACCGGACAGCAGTGGGCTTGACCCGAGGATCCACGCGACAAGCACTGCAGGAAAGATGATGGCATCCGGT
GAGGCTGAATATCGCCCCAA

Product: transposase IS4 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MRHDNSVFHDLLKRIPWTAFERLVEEHQADKHVRRLSTKSQLIALLYGQLAGATSLREIVGSLQSHGTRLYHLGARPVSR
STFADANGLRPSAVFAELFAQMVARAGRGLKRAVGEAVYLIDGSSLSLAGAGSQWARFSDQACGAKMHVVYDANAERPIY
AAVTPANVNDITAAKEMPIEAGATYVFDLGYYDFGWWAKLNAAGCRIVTRLKSHTRLTVSAEQAVNEDAGILFDRIGLLP
QRQAKSRRNPMNRPVREIGVRIETGKVLRIFSNDLTAPAEEIAALYKRRWAIELFFRWVKQTLKIRHFLGNNENAVRIQV
AVALIAYLLLQMAKADQTSVTSPLAFARLVRANLMHRKRIDRLLKPSHSPPISPAQMSLQW

Sequences:

>Translated_381_residues
MRHDNSVFHDLLKRIPWTAFERLVEEHQADKHVRRLSTKSQLIALLYGQLAGATSLREIVGSLQSHGTRLYHLGARPVSR
STFADANGLRPSAVFAELFAQMVARAGRGLKRAVGEAVYLIDGSSLSLAGAGSQWARFSDQACGAKMHVVYDANAERPIY
AAVTPANVNDITAAKEMPIEAGATYVFDLGYYDFGWWAKLNAAGCRIVTRLKSHTRLTVSAEQAVNEDAGILFDRIGLLP
QRQAKSRRNPMNRPVREIGVRIETGKVLRIFSNDLTAPAEEIAALYKRRWAIELFFRWVKQTLKIRHFLGNNENAVRIQV
AVALIAYLLLQMAKADQTSVTSPLAFARLVRANLMHRKRIDRLLKPSHSPPISPAQMSLQW
>Mature_381_residues
MRHDNSVFHDLLKRIPWTAFERLVEEHQADKHVRRLSTKSQLIALLYGQLAGATSLREIVGSLQSHGTRLYHLGARPVSR
STFADANGLRPSAVFAELFAQMVARAGRGLKRAVGEAVYLIDGSSLSLAGAGSQWARFSDQACGAKMHVVYDANAERPIY
AAVTPANVNDITAAKEMPIEAGATYVFDLGYYDFGWWAKLNAAGCRIVTRLKSHTRLTVSAEQAVNEDAGILFDRIGLLP
QRQAKSRRNPMNRPVREIGVRIETGKVLRIFSNDLTAPAEEIAALYKRRWAIELFFRWVKQTLKIRHFLGNNENAVRIQV
AVALIAYLLLQMAKADQTSVTSPLAFARLVRANLMHRKRIDRLLKPSHSPPISPAQMSLQW

Specific function: Unknown

COG id: COG3385

COG function: function code L; FOG: Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 11 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012337
- InterPro:   IPR002559
- InterPro:   IPR014736 [H]

Pfam domain/function: PF01609 Transposase_11 [H]

EC number: NA

Molecular weight: Translated: 42546; Mature: 42546

Theoretical pI: Translated: 10.80; Mature: 10.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHDNSVFHDLLKRIPWTAFERLVEEHQADKHVRRLSTKSQLIALLYGQLAGATSLREIV
CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
GSLQSHGTRLYHLGARPVSRSTFADANGLRPSAVFAELFAQMVARAGRGLKRAVGEAVYL
HHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCEEEE
IDGSSLSLAGAGSQWARFSDQACGAKMHVVYDANAERPIYAAVTPANVNDITAAKEMPIE
EECCCEEEECCCCHHHHHCCCCCCCEEEEEEECCCCCCEEEEECCCCCCHHHHHHHCCCC
AGATYVFDLGYYDFGWWAKLNAAGCRIVTRLKSHTRLTVSAEQAVNEDAGILFDRIGLLP
CCCEEEEECCCCCCCHHEEECCCHHHHHHHHHHCCEEEEEHHHHCCCCHHHHHHHHCCCC
QRQAKSRRNPMNRPVREIGVRIETGKVLRIFSNDLTAPAEEIAALYKRRWAIELFFRWVK
CHHHHHHCCCCCCCHHHHCCEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
QTLKIRHFLGNNENAVRIQVAVALIAYLLLQMAKADQTSVTSPLAFARLVRANLMHRKRI
HHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
DRLLKPSHSPPISPAQMSLQW
HHHHCCCCCCCCCHHHCCCCC
>Mature Secondary Structure
MRHDNSVFHDLLKRIPWTAFERLVEEHQADKHVRRLSTKSQLIALLYGQLAGATSLREIV
CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
GSLQSHGTRLYHLGARPVSRSTFADANGLRPSAVFAELFAQMVARAGRGLKRAVGEAVYL
HHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCEEEE
IDGSSLSLAGAGSQWARFSDQACGAKMHVVYDANAERPIYAAVTPANVNDITAAKEMPIE
EECCCEEEECCCCHHHHHCCCCCCCEEEEEEECCCCCCEEEEECCCCCCHHHHHHHCCCC
AGATYVFDLGYYDFGWWAKLNAAGCRIVTRLKSHTRLTVSAEQAVNEDAGILFDRIGLLP
CCCEEEEECCCCCCCHHEEECCCHHHHHHHHHHCCEEEEEHHHHCCCCHHHHHHHHCCCC
QRQAKSRRNPMNRPVREIGVRIETGKVLRIFSNDLTAPAEEIAALYKRRWAIELFFRWVK
CHHHHHHCCCCCCCHHHHCCEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
QTLKIRHFLGNNENAVRIQVAVALIAYLLLQMAKADQTSVTSPLAFARLVRANLMHRKRI
HHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
DRLLKPSHSPPISPAQMSLQW
HHHHCCCCCCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]