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The map label for this gene is 209548472

Identifier: 209548472

GI number: 209548472

Start: 888262

End: 888963

Strand: Direct

Name: 209548472

Synonym: Rleg2_0869

Alternate gene names: NA

Gene position: 888262-888963 (Clockwise)

Preceding gene: 209548471

Following gene: 209548473

Centisome position: 19.57

GC content: 65.24

Gene sequence:

>702_bases
ATGGCAAAGCACGGATCGTCGCTCGGTCTCCTTGCCCTCGTCCTTCTGGCATTTCCGCCGGTCGCCGCCCGGGCCGCCGA
TTGCGGCAGCCTGGCCTCGCCGAAGCTCGACTGGCAGGAATGCACCAAGAAGAACCTGATGCTGCAGGGTAGTGATCTCG
AAGGCGCTAACCTCGTCGGCACGGATTTCTCGCTGACCGATCTCGCCGGCGCCAACGTCAAATCCGCCAATCTCGAGAAG
GCGACCCTGGTGCGCGCCTCGCTCGAGGGCGCACATGCCGAAGGCGCCAGCTTCGCCAAGATCGAAGCCTATCGCGCCAG
CTTCGCCAATATCATCGCCGAAGGCGCTTCCTTCGCCGGCGCCGAGCTGCAGCGGGCCAATTTCGCCGGCGCCAGGCTTG
CCGGCGCGAGCTTCGAAAAAGCCGAACTCGGCCGCGCCGATTTCGACAAGGCGGTGCTGACCGGCACGAAATTCTCTTTC
GCCAATCTCTCCCGTGCCGATCTCTCCGGCGCAAGTTTCGAAGGCCCGGCGGTCTTCGAGCGCGCCTTCATGTTCCTGAC
CCGCATCGAAGGCCTCGACCTCTCGGCCGCATCCGGCCTCGAACAGACCCAGATCGACCTTGCCTGCGGCGACACCTCGA
CCAAACTCCCGGCCGGCCTCTCGGCGCCGACAACCTGGCCATGCCCTGCCGAGCATGAGTGA

Upstream 100 bases:

>100_bases
CGGCGCTCTCCATCTTTTTATTGTAGTCTGAGCTGTGTAAGAAAGTCGAGGCGGCCTGCTTCGCGGGTGGCTTCAGAATG
GTATGGAGGTGAACAGTTCA

Downstream 100 bases:

>100_bases
TCGGGTGGGGTTTGGCCGCATCGTCGAGTTGGGCACCGTTTCCTGGGATTCTGTAGATTTCCCCACTCTCCGTCATCCTC
GGGCTTGACCCACGGCTGTC

Product: pentapeptide repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 232

Protein sequence:

>233_residues
MAKHGSSLGLLALVLLAFPPVAARAADCGSLASPKLDWQECTKKNLMLQGSDLEGANLVGTDFSLTDLAGANVKSANLEK
ATLVRASLEGAHAEGASFAKIEAYRASFANIIAEGASFAGAELQRANFAGARLAGASFEKAELGRADFDKAVLTGTKFSF
ANLSRADLSGASFEGPAVFERAFMFLTRIEGLDLSAASGLEQTQIDLACGDTSTKLPAGLSAPTTWPCPAEHE

Sequences:

>Translated_233_residues
MAKHGSSLGLLALVLLAFPPVAARAADCGSLASPKLDWQECTKKNLMLQGSDLEGANLVGTDFSLTDLAGANVKSANLEK
ATLVRASLEGAHAEGASFAKIEAYRASFANIIAEGASFAGAELQRANFAGARLAGASFEKAELGRADFDKAVLTGTKFSF
ANLSRADLSGASFEGPAVFERAFMFLTRIEGLDLSAASGLEQTQIDLACGDTSTKLPAGLSAPTTWPCPAEHE
>Mature_232_residues
AKHGSSLGLLALVLLAFPPVAARAADCGSLASPKLDWQECTKKNLMLQGSDLEGANLVGTDFSLTDLAGANVKSANLEKA
TLVRASLEGAHAEGASFAKIEAYRASFANIIAEGASFAGAELQRANFAGARLAGASFEKAELGRADFDKAVLTGTKFSFA
NLSRADLSGASFEGPAVFERAFMFLTRIEGLDLSAASGLEQTQIDLACGDTSTKLPAGLSAPTTWPCPAEHE

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 5 pentapeptide repeat domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 24130; Mature: 23999

Theoretical pI: Translated: 4.79; Mature: 4.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKHGSSLGLLALVLLAFPPVAARAADCGSLASPKLDWQECTKKNLMLQGSDLEGANLVG
CCCCCCCHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCHHHHHHHCEEEECCCCCCCEEEC
TDFSLTDLAGANVKSANLEKATLVRASLEGAHAEGASFAKIEAYRASFANIIAEGASFAG
CCCCHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
AELQRANFAGARLAGASFEKAELGRADFDKAVLTGTKFSFANLSRADLSGASFEGPAVFE
CHHHHCCCCCCCCCCCCCCHHHCCCCCCCHHHHCCCCCCCCCCCHHCCCCCCCCCHHHHH
RAFMFLTRIEGLDLSAASGLEQTQIDLACGDTSTKLPAGLSAPTTWPCPAEHE
HHHHHHHHHCCCCCHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AKHGSSLGLLALVLLAFPPVAARAADCGSLASPKLDWQECTKKNLMLQGSDLEGANLVG
CCCCCCHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCHHHHHHHCEEEECCCCCCCEEEC
TDFSLTDLAGANVKSANLEKATLVRASLEGAHAEGASFAKIEAYRASFANIIAEGASFAG
CCCCHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC
AELQRANFAGARLAGASFEKAELGRADFDKAVLTGTKFSFANLSRADLSGASFEGPAVFE
CHHHHCCCCCCCCCCCCCCHHHCCCCCCCHHHHCCCCCCCCCCCHHCCCCCCCCCHHHHH
RAFMFLTRIEGLDLSAASGLEQTQIDLACGDTSTKLPAGLSAPTTWPCPAEHE
HHHHHHHHHCCCCCHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA