| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
Click here to switch to the map view.
The map label for this gene is catE [H]
Identifier: 209548468
GI number: 209548468
Start: 885151
End: 886116
Strand: Reverse
Name: catE [H]
Synonym: Rleg2_0865
Alternate gene names: 209548468
Gene position: 886116-885151 (Counterclockwise)
Preceding gene: 209548474
Following gene: 209548467
Centisome position: 19.53
GC content: 63.46
Gene sequence:
>966_bases ATGAACCGGCGAAACTTCCTCGGCCTTGCTGCAGGCGGCACTTTTGCCGCCACCGCCGGCACGCCTTCCCTTCTACAGGC CAGATCACAGGCAGGAGACCAATCCATGACGACCGAAACTTCTTATGCGCTGACGCGGCCCGCCTATATCGACCAGTCGC ATCTCCTCGTGAAGGACCTCGCTCTCGTGTCCGGCTTTTACCAATCGATGCTCGGCCTGAAAGTCATCGAGGAGGCTGCG AGCGGCCAGGTGCTGGGTGTCGGCGATCTGCCGCTGCTGACGCTGACGACGGCCAAGGATGCCGCGATCGCGCCCCGCAA TGCCGCCGGCCTTTTCCACACCGCTTTCCTGATGCCCGATCGCGCCGAACTGGCGCGCTGGCTGCGCCATGCGGCCCAGA ACAATGTCGTGCTCGACGGCGCCTCGGACCATCTCGTCAGCGAGGCGATCTATCTGTCCGACCCGGAAGGCAACGGCATC GAAATCTATGCCGACCGGCCGCACGAACAATGGAAGTTCCAGCAGGACGGCATGGTGGAGATGGCGACGCTGCGCCTCGA CCTGCAGGCGCTCTACGACAGCGCCCCGGACGAACGCTGGGGCGGCATGGCTGATGGAACGGCGATCGGCCACCTGCATC TACAGGTCGGCGATATTCCACAAGCTGACGCCTTTTACCGCGACGTGCTCGGCCTCAAGCTGATGGCGAGCCGTCCCGGC GCCAGTTTCTTTGCGACCGGCGGCTACCATCACCATCTCGCCGCCAATATCTGGAACAGCCGGGGTGCTGCCGCCCGCGC CGACAATATGACCGGCCTTTCGGACTACAAGGTCCGGTTTAACGACAAGGCGACCCTGGATGCGGCGATCTCCAAGCTCG ATGCGCTGGAGATCAAGAGCGAGAAGCGCGATGGCGGCACCTTCCTCAAGGATCCGTGGGGTATCGGCCTGACGCTTTCG GCGTAA
Upstream 100 bases:
>100_bases CAGCCGTTCAACAGTTCATCCTCAAAAACGGGTCTTCTGTGAACAATCGCGATCCGCCATATAGAGATCAAGTACAGCGG CTGAGAGGAGACAGAGGCGA
Downstream 100 bases:
>100_bases TTTCCGAGGCGCGGATCAGGCCGAAACGACCGAAAACATTCGTGTTATGCGGGCAAAATCATGCGTGTGAAGACGTGCCG CGTGCGGTTTGCCGGTTAGC
Product: glyoxalase/bleomycin resistance protein/dioxygenase
Products: NA
Alternate protein names: Catechol-induced ring cleavage extradiol dioxygenase [H]
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MNRRNFLGLAAGGTFAATAGTPSLLQARSQAGDQSMTTETSYALTRPAYIDQSHLLVKDLALVSGFYQSMLGLKVIEEAA SGQVLGVGDLPLLTLTTAKDAAIAPRNAAGLFHTAFLMPDRAELARWLRHAAQNNVVLDGASDHLVSEAIYLSDPEGNGI EIYADRPHEQWKFQQDGMVEMATLRLDLQALYDSAPDERWGGMADGTAIGHLHLQVGDIPQADAFYRDVLGLKLMASRPG ASFFATGGYHHHLAANIWNSRGAAARADNMTGLSDYKVRFNDKATLDAAISKLDALEIKSEKRDGGTFLKDPWGIGLTLS A
Sequences:
>Translated_321_residues MNRRNFLGLAAGGTFAATAGTPSLLQARSQAGDQSMTTETSYALTRPAYIDQSHLLVKDLALVSGFYQSMLGLKVIEEAA SGQVLGVGDLPLLTLTTAKDAAIAPRNAAGLFHTAFLMPDRAELARWLRHAAQNNVVLDGASDHLVSEAIYLSDPEGNGI EIYADRPHEQWKFQQDGMVEMATLRLDLQALYDSAPDERWGGMADGTAIGHLHLQVGDIPQADAFYRDVLGLKLMASRPG ASFFATGGYHHHLAANIWNSRGAAARADNMTGLSDYKVRFNDKATLDAAISKLDALEIKSEKRDGGTFLKDPWGIGLTLS A >Mature_321_residues MNRRNFLGLAAGGTFAATAGTPSLLQARSQAGDQSMTTETSYALTRPAYIDQSHLLVKDLALVSGFYQSMLGLKVIEEAA SGQVLGVGDLPLLTLTTAKDAAIAPRNAAGLFHTAFLMPDRAELARWLRHAAQNNVVLDGASDHLVSEAIYLSDPEGNGI EIYADRPHEQWKFQQDGMVEMATLRLDLQALYDSAPDERWGGMADGTAIGHLHLQVGDIPQADAFYRDVLGLKLMASRPG ASFFATGGYHHHLAANIWNSRGAAARADNMTGLSDYKVRFNDKATLDAAISKLDALEIKSEKRDGGTFLKDPWGIGLTLS A
Specific function: Involved in the meta cleavage of catechol to 2- hydroxymuconic semialdehyde. Essential for growth and viability in the presence of catechol and probably involved in the detoxification of catechol [H]
COG id: COG2514
COG function: function code R; Predicted ring-cleavage extradiol dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the extradiol ring-cleavage dioxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004360 - InterPro: IPR000486 [H]
Pfam domain/function: PF00903 Glyoxalase [H]
EC number: =1.13.11.2 [H]
Molecular weight: Translated: 34556; Mature: 34556
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRRNFLGLAAGGTFAATAGTPSLLQARSQAGDQSMTTETSYALTRPAYIDQSHLLVKDL CCCCCEEEEECCCCEEECCCCHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCHHHHHHH ALVSGFYQSMLGLKVIEEAASGQVLGVGDLPLLTLTTAKDAAIAPRNAAGLFHTAFLMPD HHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEECCCCCCCCCCCCCCCEEHEEECCC RAELARWLRHAAQNNVVLDGASDHLVSEAIYLSDPEGNGIEIYADRPHEQWKFQQDGMVE HHHHHHHHHHHHCCCEEEECCCCHHHHCEEEEECCCCCCEEEEECCCCHHCCCCCCCCEE MATLRLDLQALYDSAPDERWGGMADGTAIGHLHLQVGDIPQADAFYRDVLGLKLMASRPG EEHHHHHHHHHHCCCCCHHCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHCEEEEECCCC ASFFATGGYHHHLAANIWNSRGAAARADNMTGLSDYKVRFNDKATLDAAISKLDALEIKS CCEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCC EKRDGGTFLKDPWGIGLTLSA CCCCCCCEECCCCCCCEEECC >Mature Secondary Structure MNRRNFLGLAAGGTFAATAGTPSLLQARSQAGDQSMTTETSYALTRPAYIDQSHLLVKDL CCCCCEEEEECCCCEEECCCCHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCHHHHHHH ALVSGFYQSMLGLKVIEEAASGQVLGVGDLPLLTLTTAKDAAIAPRNAAGLFHTAFLMPD HHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEECCCCCCCCCCCCCCCEEHEEECCC RAELARWLRHAAQNNVVLDGASDHLVSEAIYLSDPEGNGIEIYADRPHEQWKFQQDGMVE HHHHHHHHHHHHCCCEEEECCCCHHHHCEEEEECCCCCCEEEEECCCCHHCCCCCCCCEE MATLRLDLQALYDSAPDERWGGMADGTAIGHLHLQVGDIPQADAFYRDVLGLKLMASRPG EEHHHHHHHHHHCCCCCHHCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHCEEEEECCCC ASFFATGGYHHHLAANIWNSRGAAARADNMTGLSDYKVRFNDKATLDAAISKLDALEIKS CCEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCC EKRDGGTFLKDPWGIGLTLSA CCCCCCCEECCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8704981; 9384377 [H]