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The map label for this gene is tqsA [H]

Identifier: 209548467

GI number: 209548467

Start: 883809

End: 884975

Strand: Reverse

Name: tqsA [H]

Synonym: Rleg2_0864

Alternate gene names: 209548467

Gene position: 884975-883809 (Counterclockwise)

Preceding gene: 209548468

Following gene: 209548466

Centisome position: 19.5

GC content: 61.87

Gene sequence:

>1167_bases
ATGGGCATCGCCAATGGCATCCGCAAACAAGCCAAGAAGATTGCGATCGGCGAACGCCGCACCAGCGCCTGGGCGCAGAC
ATTGAAGGAGACAGCCGAAGAGCTGCCGCCGACACCGCTGCACCGGCTCGAGAAGGACGGGCTGGATATCAGCATGGCCT
GGGCGATCATCGGCATCTTCGGCATTCTGGGGCTTGCCGCCGTCTACCTGATGTCGCTGATCCTGATCCCGATCACCCTT
GCCGTCGTCGTCGGCATGATCCTCGGCATGGCGGCGGAAAAACTCAGCAGGATGGGCGTGCCGCGGCTTGCCAACGCCTT
CATGCTGTCGAGCAGCGTGGCACTGGTGATCTTCCTGGTGATCAACTCGCTGGCCGGCCCGCTGATGACCCTTGCCAATG
AGGGACCGGCTTTTGCCGAGCGGACCATCAACCGCGTCATGCCCTATCTCGAGCGCATCGAATGGCTGCATATCACGCCC
GCGACCTTCGAAAGCGGGCCGATGTCGATCGGTGCGCTGCTCGAAAACACCGGCAACGTGCTGCATGTGGTGACCACCAG
CCTGACGCCGGCACTGGTGCAGGGGATGATCTTCTTTGCGGCGCTGCTGCTCTTCCTTGCCAGCCGCGTCAACCTGCGCA
AGACGATCATCATGACCTTCCGCACCCGCACGCAGCGGCTGGCGGCCATCCGCGTCATCAATGCCGTCGAGCAGGTGCTC
GGCTTCTATTTCGCCACAGCCTCGCTGATCTATGTCGGGCTCGGCGTCGTCATGACCGTGATCGCCTATGCCGGCGGGCT
GGCGGCGCCGGTGCTCTGGGGCTTCTTCGCCTTCCTGTCGAGCTTCATTCCCTATCTCGGCATCACGCTGATGACGTTTG
CCGTCGCCGTCGCCGGCATTCTCACCCATGATGACATCGTCATCGGCCTGATGCCGGCCGCGGCCTTCTTTACCGTGCAT
CTGGTCATGGAGAACCTGATTTTCCCGGCGGTGATGGGACGGCGGCTGGAAATCAATCCCTTTGTCGTCTTCCTCGCCAT
CCTGTTCTGGACATGGATGTGGGGTGCCGTCGGCGCCATGCTGGCCCTGCCGCTGTCGCTGATCGTCATCACAATCATCG
AGGAATTGCTGATCGAGGAAAAGCCGCAGCCGCAATTGCCGAAATGA

Upstream 100 bases:

>100_bases
TGCCGCGTGCGGTTTGCCGGTTAGCCCTTTGCCTCAGGGAACCGGAACCGCGTCGGCGCGTTTCCGTGACGAAGCAATGG
GCTTCGGGGGACCTCACCGC

Downstream 100 bases:

>100_bases
TCAACCGGGGAGATAGTGGTGGCATCTGATCTCGCTCTCAACGAAGCCGATCACGACCAGATGGTCAGCGGTCGATCGCT
CTGGGGGAAAAGCGGCATTC

Product: hypothetical protein

Products: NA

Alternate protein names: Transport of quorum-sensing signal protein [H]

Number of amino acids: Translated: 388; Mature: 387

Protein sequence:

>388_residues
MGIANGIRKQAKKIAIGERRTSAWAQTLKETAEELPPTPLHRLEKDGLDISMAWAIIGIFGILGLAAVYLMSLILIPITL
AVVVGMILGMAAEKLSRMGVPRLANAFMLSSSVALVIFLVINSLAGPLMTLANEGPAFAERTINRVMPYLERIEWLHITP
ATFESGPMSIGALLENTGNVLHVVTTSLTPALVQGMIFFAALLLFLASRVNLRKTIIMTFRTRTQRLAAIRVINAVEQVL
GFYFATASLIYVGLGVVMTVIAYAGGLAAPVLWGFFAFLSSFIPYLGITLMTFAVAVAGILTHDDIVIGLMPAAAFFTVH
LVMENLIFPAVMGRRLEINPFVVFLAILFWTWMWGAVGAMLALPLSLIVITIIEELLIEEKPQPQLPK

Sequences:

>Translated_388_residues
MGIANGIRKQAKKIAIGERRTSAWAQTLKETAEELPPTPLHRLEKDGLDISMAWAIIGIFGILGLAAVYLMSLILIPITL
AVVVGMILGMAAEKLSRMGVPRLANAFMLSSSVALVIFLVINSLAGPLMTLANEGPAFAERTINRVMPYLERIEWLHITP
ATFESGPMSIGALLENTGNVLHVVTTSLTPALVQGMIFFAALLLFLASRVNLRKTIIMTFRTRTQRLAAIRVINAVEQVL
GFYFATASLIYVGLGVVMTVIAYAGGLAAPVLWGFFAFLSSFIPYLGITLMTFAVAVAGILTHDDIVIGLMPAAAFFTVH
LVMENLIFPAVMGRRLEINPFVVFLAILFWTWMWGAVGAMLALPLSLIVITIIEELLIEEKPQPQLPK
>Mature_387_residues
GIANGIRKQAKKIAIGERRTSAWAQTLKETAEELPPTPLHRLEKDGLDISMAWAIIGIFGILGLAAVYLMSLILIPITLA
VVVGMILGMAAEKLSRMGVPRLANAFMLSSSVALVIFLVINSLAGPLMTLANEGPAFAERTINRVMPYLERIEWLHITPA
TFESGPMSIGALLENTGNVLHVVTTSLTPALVQGMIFFAALLLFLASRVNLRKTIIMTFRTRTQRLAAIRVINAVEQVLG
FYFATASLIYVGLGVVMTVIAYAGGLAAPVLWGFFAFLSSFIPYLGITLMTFAVAVAGILTHDDIVIGLMPAAAFFTVHL
VMENLIFPAVMGRRLEINPFVVFLAILFWTWMWGAVGAMLALPLSLIVITIIEELLIEEKPQPQLPK

Specific function: Controls the transport of the quorum-sensing signal AI-2 either by enhancing its secretion or inhibiting its uptake and consequently represses biofilm formation and motility and affects the global gene expression in biofilms [H]

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1787885, Length=103, Percent_Identity=34.9514563106796, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI87082271, Length=154, Percent_Identity=27.9220779220779, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 42203; Mature: 42071

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIANGIRKQAKKIAIGERRTSAWAQTLKETAEELPPTPLHRLEKDGLDISMAWAIIGIF
CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHH
GILGLAAVYLMSLILIPITLAVVVGMILGMAAEKLSRMGVPRLANAFMLSSSVALVIFLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
INSLAGPLMTLANEGPAFAERTINRVMPYLERIEWLHITPATFESGPMSIGALLENTGNV
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCE
LHVVTTSLTPALVQGMIFFAALLLFLASRVNLRKTIIMTFRTRTQRLAAIRVINAVEQVL
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GFYFATASLIYVGLGVVMTVIAYAGGLAAPVLWGFFAFLSSFIPYLGITLMTFAVAVAGI
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTHDDIVIGLMPAAAFFTVHLVMENLIFPAVMGRRLEINPFVVFLAILFWTWMWGAVGAM
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LALPLSLIVITIIEELLIEEKPQPQLPK
HHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
GIANGIRKQAKKIAIGERRTSAWAQTLKETAEELPPTPLHRLEKDGLDISMAWAIIGIF
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHH
GILGLAAVYLMSLILIPITLAVVVGMILGMAAEKLSRMGVPRLANAFMLSSSVALVIFLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
INSLAGPLMTLANEGPAFAERTINRVMPYLERIEWLHITPATFESGPMSIGALLENTGNV
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCE
LHVVTTSLTPALVQGMIFFAALLLFLASRVNLRKTIIMTFRTRTQRLAAIRVINAVEQVL
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GFYFATASLIYVGLGVVMTVIAYAGGLAAPVLWGFFAFLSSFIPYLGITLMTFAVAVAGI
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTHDDIVIGLMPAAAFFTVHLVMENLIFPAVMGRRLEINPFVVFLAILFWTWMWGAVGAM
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LALPLSLIVITIIEELLIEEKPQPQLPK
HHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]