| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is czcD [H]
Identifier: 209548457
GI number: 209548457
Start: 869822
End: 870814
Strand: Direct
Name: czcD [H]
Synonym: Rleg2_0854
Alternate gene names: 209548457
Gene position: 869822-870814 (Clockwise)
Preceding gene: 209548456
Following gene: 209548458
Centisome position: 19.17
GC content: 64.45
Gene sequence:
>993_bases ATGAGTACCGGGATCGAGAATGCTGGAGCAGACGCGCTGGAACATGACCATATCTTCCTCGGCGCCGATCACGCGGTGAA CGAGCGGCGCATCTGGCTGGTGATCGCGCTGACGGCGGTGATGATGGTGGCGGAAATCGCCGCCGGCACCGCCTATGGCT CGATGGCGCTGCTCGCTGATGGCTGGCATATGTCGACCCATGCCAGCGCGCTTTTGATTTCGGCGCTCGCCTATCTCTTC GCCCGCAAGCAGGCGCGCAATCCGCGTTTCACCTTCGGCACCGGCAAGCTCGGCGATCTCGCCGGCTTCGCCAGCGCCAT CATTCTTGCGCTGATCGCCCTGCTGATGGCCTGGGAAAGCTGGCTGCGCCTTTCAAATCCGGTGCCGATCGGTTTCGCCC AGGCAATCGCCGTTGCGGTGATCGGCCTTGCCGTCAATCTCGTCAGCGCCTGGCTGCTTGGCGGCGGCCACGCGCATGGC CATCACGCGCATGGTCATCATGCGCACCATCACGGCGATCATGCCCATCACGGTCATGGTGATCACGCCCACGATCATCA CGGAAAGCCCGGCGATAACAATATCCGCGCCGCCTATCTGCATGTCATCGCCGATGCCATGACCTCCGTGCTCGCCATCG CGGCGCTGACCCTCGGCAGCCTCTACGGCTGGCTCTGGCTCGACCCGATCATGGGCATCGTCGGTGGCCTGGTTATCGCC AACTGGTCCTGGAGCCTGATGCGATCCTCCGGCGGCGTCCTTCTCGACGTCGTGCCGCACGGCGAGACACTGCCGGCGGA AATCCGCCACGCGATCGAGACGGAGGAGGATCGGATCACCGATCTGCATGTCTGGCAGGTCGGCCCCGGCCATCACGCCG CCATCGTCGCCGTCGTCACCTCGACGCCGCGCGAACCGGCTTTCTACAAGGGCAGGCTTTCGGCGCTGACGGAATTGTCG CATGTGACCGTCGAGGTTACGCGCGCGGCGTAA
Upstream 100 bases:
>100_bases TGAATGCCGAGGACGACGCCGCCAGGGCCGAGGCGGTCGAGGAAATATCGGAAGTCTTGCGAACCTATATCCGCTGAGTG CCGTGACGAAGGAGCCTGTA
Downstream 100 bases:
>100_bases TCGCGGCGGCGGCAACAAGGTTGCTCGGCGGACGACGAAGTCGCCGCGGGGACGAGATGCCGCCGCAATCGCGCCTTAGC TCTGTCCTCCCCACCGCCGG
Product: cation diffusion facilitator family transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 330; Mature: 329
Protein sequence:
>330_residues MSTGIENAGADALEHDHIFLGADHAVNERRIWLVIALTAVMMVAEIAAGTAYGSMALLADGWHMSTHASALLISALAYLF ARKQARNPRFTFGTGKLGDLAGFASAIILALIALLMAWESWLRLSNPVPIGFAQAIAVAVIGLAVNLVSAWLLGGGHAHG HHAHGHHAHHHGDHAHHGHGDHAHDHHGKPGDNNIRAAYLHVIADAMTSVLAIAALTLGSLYGWLWLDPIMGIVGGLVIA NWSWSLMRSSGGVLLDVVPHGETLPAEIRHAIETEEDRITDLHVWQVGPGHHAAIVAVVTSTPREPAFYKGRLSALTELS HVTVEVTRAA
Sequences:
>Translated_330_residues MSTGIENAGADALEHDHIFLGADHAVNERRIWLVIALTAVMMVAEIAAGTAYGSMALLADGWHMSTHASALLISALAYLF ARKQARNPRFTFGTGKLGDLAGFASAIILALIALLMAWESWLRLSNPVPIGFAQAIAVAVIGLAVNLVSAWLLGGGHAHG HHAHGHHAHHHGDHAHHGHGDHAHDHHGKPGDNNIRAAYLHVIADAMTSVLAIAALTLGSLYGWLWLDPIMGIVGGLVIA NWSWSLMRSSGGVLLDVVPHGETLPAEIRHAIETEEDRITDLHVWQVGPGHHAAIVAVVTSTPREPAFYKGRLSALTELS HVTVEVTRAA >Mature_329_residues STGIENAGADALEHDHIFLGADHAVNERRIWLVIALTAVMMVAEIAAGTAYGSMALLADGWHMSTHASALLISALAYLFA RKQARNPRFTFGTGKLGDLAGFASAIILALIALLMAWESWLRLSNPVPIGFAQAIAVAVIGLAVNLVSAWLLGGGHAHGH HAHGHHAHHHGDHAHHGHGDHAHDHHGKPGDNNIRAAYLHVIADAMTSVLAIAALTLGSLYGWLWLDPIMGIVGGLVIAN WSWSLMRSSGGVLLDVVPHGETLPAEIRHAIETEEDRITDLHVWQVGPGHHAAIVAVVTSTPREPAFYKGRLSALTELSH VTVEVTRAA
Specific function: Involved in divalent cation and potassium homeostasis in the cell. Catalyzes the active efflux of zinc, cadmium and cobalt, in exchange for potassium and H(+) ions [H]
COG id: COG1230
COG function: function code P; Co/Zn/Cd efflux system component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. SLC30A subfamily [H]
Homologues:
Organism=Homo sapiens, GI20070323, Length=323, Percent_Identity=26.9349845201238, Blast_Score=88, Evalue=9e-18, Organism=Homo sapiens, GI222080086, Length=267, Percent_Identity=26.2172284644195, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI40255009, Length=267, Percent_Identity=26.2172284644195, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI21359890, Length=271, Percent_Identity=25.830258302583, Blast_Score=71, Evalue=2e-12, Organism=Escherichia coli, GI1786966, Length=266, Percent_Identity=34.2105263157895, Blast_Score=100, Evalue=2e-22, Organism=Caenorhabditis elegans, GI32564488, Length=347, Percent_Identity=28.8184438040346, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI193210990, Length=263, Percent_Identity=25.8555133079848, Blast_Score=70, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17555794, Length=295, Percent_Identity=27.7966101694915, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17555796, Length=279, Percent_Identity=28.3154121863799, Blast_Score=68, Evalue=8e-12, Organism=Saccharomyces cerevisiae, GI6320411, Length=218, Percent_Identity=25.6880733944954, Blast_Score=66, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6323899, Length=192, Percent_Identity=28.125, Blast_Score=64, Evalue=5e-11, Organism=Drosophila melanogaster, GI24656728, Length=296, Percent_Identity=27.3648648648649, Blast_Score=75, Evalue=7e-14, Organism=Drosophila melanogaster, GI24656724, Length=296, Percent_Identity=27.3648648648649, Blast_Score=75, Evalue=7e-14, Organism=Drosophila melanogaster, GI24656720, Length=296, Percent_Identity=27.3648648648649, Blast_Score=75, Evalue=7e-14, Organism=Drosophila melanogaster, GI24656715, Length=296, Percent_Identity=27.3648648648649, Blast_Score=75, Evalue=7e-14, Organism=Drosophila melanogaster, GI21357035, Length=296, Percent_Identity=27.3648648648649, Blast_Score=75, Evalue=7e-14, Organism=Drosophila melanogaster, GI24645863, Length=301, Percent_Identity=24.9169435215947, Blast_Score=75, Evalue=8e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002524 [H]
Pfam domain/function: PF01545 Cation_efflux [H]
EC number: NA
Molecular weight: Translated: 35127; Mature: 34995
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTGIENAGADALEHDHIFLGADHAVNERRIWLVIALTAVMMVAEIAAGTAYGSMALLAD CCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC GWHMSTHASALLISALAYLFARKQARNPRFTFGTGKLGDLAGFASAIILALIALLMAWES CCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH WLRLSNPVPIGFAQAIAVAVIGLAVNLVSAWLLGGGHAHGHHAHGHHAHHHGDHAHHGHG HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC DHAHDHHGKPGDNNIRAAYLHVIADAMTSVLAIAALTLGSLYGWLWLDPIMGIVGGLVIA CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NWSWSLMRSSGGVLLDVVPHGETLPAEIRHAIETEEDRITDLHVWQVGPGHHAAIVAVVT CCCHHHHHCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCEEEEEEEECCCCCEEEEEEEE STPREPAFYKGRLSALTELSHVTVEVTRAA CCCCCCCHHHHHHHHHHHHHHEEEEEEECC >Mature Secondary Structure STGIENAGADALEHDHIFLGADHAVNERRIWLVIALTAVMMVAEIAAGTAYGSMALLAD CCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC GWHMSTHASALLISALAYLFARKQARNPRFTFGTGKLGDLAGFASAIILALIALLMAWES CCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH WLRLSNPVPIGFAQAIAVAVIGLAVNLVSAWLLGGGHAHGHHAHGHHAHHHGDHAHHGHG HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC DHAHDHHGKPGDNNIRAAYLHVIADAMTSVLAIAALTLGSLYGWLWLDPIMGIVGGLVIA CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NWSWSLMRSSGGVLLDVVPHGETLPAEIRHAIETEEDRITDLHVWQVGPGHHAAIVAVVT CCCHHHHHCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCEEEEEEEECCCCCEEEEEEEE STPREPAFYKGRLSALTELSHVTVEVTRAA CCCCCCCHHHHHHHHHHHHHHEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA