| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is yohL [C]
Identifier: 209548456
GI number: 209548456
Start: 869526
End: 869798
Strand: Direct
Name: yohL [C]
Synonym: Rleg2_0853
Alternate gene names: 209548456
Gene position: 869526-869798 (Clockwise)
Preceding gene: 209548454
Following gene: 209548457
Centisome position: 19.16
GC content: 65.2
Gene sequence:
>273_bases ATGTCTCACACCACCTTGCAGAAAAAGAAGCTCATCGCCCGCGTCAGCCGTCTGAAGGGGCAGATGGAGGCCGTCGAGCG GGCGCTGGAGGCCGAGCGCCCCTGCGGCGAAATCCTGCAGCTGCTCGCCTCCGTCCGCGGCGCCCTGACCGGGCTGACCG GCGAGGTGCTGGACGATCATCTGCGCGAACATGTGCTGAATGCCGAGGACGACGCCGCCAGGGCCGAGGCGGTCGAGGAA ATATCGGAAGTCTTGCGAACCTATATCCGCTGA
Upstream 100 bases:
>100_bases TCGTCGCAAATGCCGCGTTTGTCAAGGCCGATCGCCGCGCGTCGGCAATGATCCCACTTTTGCTCTTGATAGTATACCCC CCTATGTTACATAGGGGCGC
Downstream 100 bases:
>100_bases GTGCCGTGACGAAGGAGCCTGTAATGAGTACCGGGATCGAGAATGCTGGAGCAGACGCGCTGGAACATGACCATATCTTC CTCGGCGCCGATCACGCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 89
Protein sequence:
>90_residues MSHTTLQKKKLIARVSRLKGQMEAVERALEAERPCGEILQLLASVRGALTGLTGEVLDDHLREHVLNAEDDAARAEAVEE ISEVLRTYIR
Sequences:
>Translated_90_residues MSHTTLQKKKLIARVSRLKGQMEAVERALEAERPCGEILQLLASVRGALTGLTGEVLDDHLREHVLNAEDDAARAEAVEE ISEVLRTYIR >Mature_89_residues SHTTLQKKKLIARVSRLKGQMEAVERALEAERPCGEILQLLASVRGALTGLTGEVLDDHLREHVLNAEDDAARAEAVEEI SEVLRTYIR
Specific function: Unknown
COG id: COG1937
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the frmR/rcnR family [H]
Homologues:
Organism=Escherichia coli, GI1788422, Length=90, Percent_Identity=40, Blast_Score=75, Evalue=1e-15, Organism=Escherichia coli, GI87081725, Length=92, Percent_Identity=41.304347826087, Blast_Score=72, Evalue=5e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003735 [H]
Pfam domain/function: PF02583 DUF156 [H]
EC number: NA
Molecular weight: Translated: 10021; Mature: 9889
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHTTLQKKKLIARVSRLKGQMEAVERALEAERPCGEILQLLASVRGALTGLTGEVLDDH CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LREHVLNAEDDAARAEAVEEISEVLRTYIR HHHHHCCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SHTTLQKKKLIARVSRLKGQMEAVERALEAERPCGEILQLLASVRGALTGLTGEVLDDH CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LREHVLNAEDDAARAEAVEEISEVLRTYIR HHHHHCCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA