| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
Click here to switch to the map view.
The map label for this gene is rimJ [H]
Identifier: 209548239
GI number: 209548239
Start: 658167
End: 658781
Strand: Reverse
Name: rimJ [H]
Synonym: Rleg2_0633
Alternate gene names: 209548239
Gene position: 658781-658167 (Counterclockwise)
Preceding gene: 209548240
Following gene: 209548238
Centisome position: 14.52
GC content: 58.7
Gene sequence:
>615_bases ATGCCAAAATCGGTGTTTCGGTTTCTGTCGCGGCAGCCGGATGCGGTCGAGCTGGAAAACGACAGATATCTCTTGCGCCT GCCGCGCTACCAGGATTTCAACCAGTGGCACCGGCTGCGTGCCGAAAGCCGCAAGTTTCTGGAGCCCTGGGAGCCGACCT GGCGACGCGACGAGCTGACGGAGGGCGCCTACCGCGCCCGCGTCATCCGCGGCAAGCAGGAATATGCCTCGGGCCAGGCC ATTCCGCTGTTCATTTTCCTCAAGGAAAACCACACCCTCGTCGGCGGCATCACCATCGGTTATATCAGGCGGGGTGCCGC GCAAAGCTGCATGATCGGCTACTGGATGGGCGAGCGCCATGCCGGCCAGGGGCATATGTTCGCCGCCCTGCAAATGGTTA TTCCTTATATCTTCACCGGGCTTGAGTTGCACCGTATCGAAGCAGCCTGTATTCCAGATAACGCGCGCAGCATCCGCCTG CTTGAAAAGGCCGGGTTTCAGCAGGAAGGTTATCTGCGCGGATACTTGAAGATCAACGGTCAGTGGCATGACCATGTGAT GTTTTCACGTCTCGCCACCGATACGGATAAAGGCAGGAAAACCGACAGCCGATGA
Upstream 100 bases:
>100_bases TCGCGCCGATGGAAGACATCACCGCTTCGCTTTCGGTCCCGGCACCGAAGACGATGCAGGCCGGCCGCTGAGCCGGCGTC CGTCCTGCCGGGAGTGATCG
Downstream 100 bases:
>100_bases CCAGAGACCGCATGCTGCCCAAGTCACCGTCCGGACGAGTGATCGCGGTGATCGCAGCCCTTTTCCTGGCGGCCTTCGCC CTGGTGGCGGGCGCTGCCCA
Product: GCN5-like N-acetyltransferase
Products: NA
Alternate protein names: Acetylating enzyme for N-terminal of ribosomal protein S5 [H]
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MPKSVFRFLSRQPDAVELENDRYLLRLPRYQDFNQWHRLRAESRKFLEPWEPTWRRDELTEGAYRARVIRGKQEYASGQA IPLFIFLKENHTLVGGITIGYIRRGAAQSCMIGYWMGERHAGQGHMFAALQMVIPYIFTGLELHRIEAACIPDNARSIRL LEKAGFQQEGYLRGYLKINGQWHDHVMFSRLATDTDKGRKTDSR
Sequences:
>Translated_204_residues MPKSVFRFLSRQPDAVELENDRYLLRLPRYQDFNQWHRLRAESRKFLEPWEPTWRRDELTEGAYRARVIRGKQEYASGQA IPLFIFLKENHTLVGGITIGYIRRGAAQSCMIGYWMGERHAGQGHMFAALQMVIPYIFTGLELHRIEAACIPDNARSIRL LEKAGFQQEGYLRGYLKINGQWHDHVMFSRLATDTDKGRKTDSR >Mature_203_residues PKSVFRFLSRQPDAVELENDRYLLRLPRYQDFNQWHRLRAESRKFLEPWEPTWRRDELTEGAYRARVIRGKQEYASGQAI PLFIFLKENHTLVGGITIGYIRRGAAQSCMIGYWMGERHAGQGHMFAALQMVIPYIFTGLELHRIEAACIPDNARSIRLL EKAGFQQEGYLRGYLKINGQWHDHVMFSRLATDTDKGRKTDSR
Specific function: This enzyme acetylates the N-terminal alanine of ribosomal protein S5. Plays also a role in the temperature regulation of pap pilin transcription [H]
COG id: COG1670
COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1787305, Length=195, Percent_Identity=33.8461538461538, Blast_Score=113, Evalue=7e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: =2.3.1.128 [H]
Molecular weight: Translated: 23890; Mature: 23759
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKSVFRFLSRQPDAVELENDRYLLRLPRYQDFNQWHRLRAESRKFLEPWEPTWRRDELT CCHHHHHHHHCCCCCEEECCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHH EGAYRARVIRGKQEYASGQAIPLFIFLKENHTLVGGITIGYIRRGAAQSCMIGYWMGERH HHHHHHHHHCCHHHHCCCCCEEEEEEEECCCEEEEEEEEEEHHCCCCCCEEEEEEECCCC AGQGHMFAALQMVIPYIFTGLELHRIEAACIPDNARSIRLLEKAGFQQEGYLRGYLKING CCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHHCCCCCCCEEEEEEEECC QWHDHVMFSRLATDTDKGRKTDSR CCHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure PKSVFRFLSRQPDAVELENDRYLLRLPRYQDFNQWHRLRAESRKFLEPWEPTWRRDELT CHHHHHHHHCCCCCEEECCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHH EGAYRARVIRGKQEYASGQAIPLFIFLKENHTLVGGITIGYIRRGAAQSCMIGYWMGERH HHHHHHHHHCCHHHHCCCCCEEEEEEEECCCEEEEEEEEEEHHCCCCCCEEEEEEECCCC AGQGHMFAALQMVIPYIFTGLELHRIEAACIPDNARSIRLLEKAGFQQEGYLRGYLKING CCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCHHHHHHHHCCCCCCCEEEEEEEECC QWHDHVMFSRLATDTDKGRKTDSR CCHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]