| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is pqqL [C]
Identifier: 209548240
GI number: 209548240
Start: 658811
End: 660109
Strand: Reverse
Name: pqqL [C]
Synonym: Rleg2_0634
Alternate gene names: 209548240
Gene position: 660109-658811 (Counterclockwise)
Preceding gene: 209548241
Following gene: 209548239
Centisome position: 14.55
GC content: 63.82
Gene sequence:
>1299_bases ATGACAGTTGAGTGCACCCGGCTGAAATCCGGGCTGACAGTAGTGACAGAAACCATGCCGCACCTTGAAAGCGTTGCGCT CGGAGTCTGGATCAAATCGGGATCGCGTAACGAGACGGCAGACGAACACGGCATCGCCCACCTGCTTGAACACATGGCAT TCAAGGGCACTGGGCGCCGCAGCGCCCGCCAGATCGCCGAGGAGATCGAGGATGTGGGCGGCGAGGTCAATGCCGCCACA TCGACCGAGACGACCTCCTACTACGCCCGCGTGCTCAAGGACCACGTGCCGCTCGCCGTCGATATCCTCGCCGACATCCT GACGGAATCGGCCTTCGAGGAGGAGGAGCTTGAGCGTGAGAAGCAGGTGATCCTGCAGGAGATCAACGCCGCCAACGACA CGCCCGACGACGTGGTGTTCGACCGGTTCTCCGAGGTCGCCTATCGCGACCAGACGCTCGGCCGGGCCATCCTCGGCACG CCGGAGACCGTCGTCTCCTTCACGCCGCAGCAGATCCGCGGCTATCTCGGCCGCAACTACACGACCGACCGCATGTTCGT CGTCGCTACCGGCGCCGTCGAGCATGACGAATTCGTCCGCATGGTCGAGGATCGTTTCGCCAGCCTGCCGAGCGAGCCTT CGGCGCCGCCGGTCATGGAAGCGGCGCGTTATATCGGCGGCAGCGTGCGCGAACCGCGCGACCTGATGGACGCGCAGATC CTGCTCGGTTTCGAGGGCAAACCCTATCATGCCCGCGATTTCTACTGTTCGCAGATCCTCGCCAATATCCTCGGCGGCGG CATGTCTTCGCGGCTGTTCCAGGAGGTGCGCGAGTTCCGCGGTCTCTGTTATTCCGTCTATGCCTTCCACTGGGGCTTTT CCGACACCGGCATCTTCGGCATTCATGCCGCAACCGGCGGCGAAAACCTGCCGCAGCTGGTGCCCGTCATCATCGACGAG CTGCACAAATCCGCCGACCAGATCCACCAGAAGGAAATCGAGCGCGCCCGCGCCCAGATCCGCGCCCAGTTGCTGATGGG CCAGGAAAGCCCGGCCTCGCGCGCCGGCCAGATCGCCAGGCAGATGATGCTTTACGGCCGGCCGATCTCCAATATGGAGA TGATGGAACGGCTTGAGGGCATCACCATCGAGCGGCTGACGGATCTCGCCGGCCGGCTGTTCTACGACACGGTGCCGACG CTTTCGGCAATCGGTCCGCTGGAACAGCTCGCGCCGATGGAAGACATCACCGCTTCGCTTTCGGTCCCGGCACCGAAGAC GATGCAGGCCGGCCGCTGA
Upstream 100 bases:
>100_bases GGAGCGCTTCCAGATCATCGAACCGGAGCTGAAAGCCGTAGAGACCTTTATCGGCAAACACGCCCGCGGCAAGACGACGG CAGGCGCAGAAAGATAGCCA
Downstream 100 bases:
>100_bases GCCGGCGTCCGTCCTGCCGGGAGTGATCGATGCCAAAATCGGTGTTTCGGTTTCTGTCGCGGCAGCCGGATGCGGTCGAG CTGGAAAACGACAGATATCT
Product: peptidase M16 domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 432; Mature: 431
Protein sequence:
>432_residues MTVECTRLKSGLTVVTETMPHLESVALGVWIKSGSRNETADEHGIAHLLEHMAFKGTGRRSARQIAEEIEDVGGEVNAAT STETTSYYARVLKDHVPLAVDILADILTESAFEEEELEREKQVILQEINAANDTPDDVVFDRFSEVAYRDQTLGRAILGT PETVVSFTPQQIRGYLGRNYTTDRMFVVATGAVEHDEFVRMVEDRFASLPSEPSAPPVMEAARYIGGSVREPRDLMDAQI LLGFEGKPYHARDFYCSQILANILGGGMSSRLFQEVREFRGLCYSVYAFHWGFSDTGIFGIHAATGGENLPQLVPVIIDE LHKSADQIHQKEIERARAQIRAQLLMGQESPASRAGQIARQMMLYGRPISNMEMMERLEGITIERLTDLAGRLFYDTVPT LSAIGPLEQLAPMEDITASLSVPAPKTMQAGR
Sequences:
>Translated_432_residues MTVECTRLKSGLTVVTETMPHLESVALGVWIKSGSRNETADEHGIAHLLEHMAFKGTGRRSARQIAEEIEDVGGEVNAAT STETTSYYARVLKDHVPLAVDILADILTESAFEEEELEREKQVILQEINAANDTPDDVVFDRFSEVAYRDQTLGRAILGT PETVVSFTPQQIRGYLGRNYTTDRMFVVATGAVEHDEFVRMVEDRFASLPSEPSAPPVMEAARYIGGSVREPRDLMDAQI LLGFEGKPYHARDFYCSQILANILGGGMSSRLFQEVREFRGLCYSVYAFHWGFSDTGIFGIHAATGGENLPQLVPVIIDE LHKSADQIHQKEIERARAQIRAQLLMGQESPASRAGQIARQMMLYGRPISNMEMMERLEGITIERLTDLAGRLFYDTVPT LSAIGPLEQLAPMEDITASLSVPAPKTMQAGR >Mature_431_residues TVECTRLKSGLTVVTETMPHLESVALGVWIKSGSRNETADEHGIAHLLEHMAFKGTGRRSARQIAEEIEDVGGEVNAATS TETTSYYARVLKDHVPLAVDILADILTESAFEEEELEREKQVILQEINAANDTPDDVVFDRFSEVAYRDQTLGRAILGTP ETVVSFTPQQIRGYLGRNYTTDRMFVVATGAVEHDEFVRMVEDRFASLPSEPSAPPVMEAARYIGGSVREPRDLMDAQIL LGFEGKPYHARDFYCSQILANILGGGMSSRLFQEVREFRGLCYSVYAFHWGFSDTGIFGIHAATGGENLPQLVPVIIDEL HKSADQIHQKEIERARAQIRAQLLMGQESPASRAGQIARQMMLYGRPISNMEMMERLEGITIERLTDLAGRLFYDTVPTL SAIGPLEQLAPMEDITASLSVPAPKTMQAGR
Specific function: Unknown
COG id: COG0612
COG function: function code R; Predicted Zn-dependent peptidases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M16 family [H]
Homologues:
Organism=Homo sapiens, GI94538354, Length=428, Percent_Identity=32.4766355140187, Blast_Score=238, Evalue=7e-63, Organism=Homo sapiens, GI46593007, Length=415, Percent_Identity=27.710843373494, Blast_Score=187, Evalue=1e-47, Organism=Homo sapiens, GI24308013, Length=448, Percent_Identity=26.5625, Blast_Score=140, Evalue=2e-33, Organism=Homo sapiens, GI50592988, Length=417, Percent_Identity=21.5827338129496, Blast_Score=87, Evalue=3e-17, Organism=Escherichia coli, GI1787770, Length=206, Percent_Identity=28.1553398058252, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI2367164, Length=220, Percent_Identity=26.3636363636364, Blast_Score=73, Evalue=4e-14, Organism=Caenorhabditis elegans, GI71999683, Length=429, Percent_Identity=29.8368298368298, Blast_Score=193, Evalue=2e-49, Organism=Caenorhabditis elegans, GI17553678, Length=416, Percent_Identity=26.4423076923077, Blast_Score=152, Evalue=4e-37, Organism=Caenorhabditis elegans, GI17510601, Length=454, Percent_Identity=25.3303964757709, Blast_Score=141, Evalue=9e-34, Organism=Caenorhabditis elegans, GI17569737, Length=325, Percent_Identity=23.0769230769231, Blast_Score=72, Evalue=7e-13, Organism=Saccharomyces cerevisiae, GI6323192, Length=426, Percent_Identity=31.924882629108, Blast_Score=233, Evalue=6e-62, Organism=Saccharomyces cerevisiae, GI6321813, Length=420, Percent_Identity=28.0952380952381, Blast_Score=149, Evalue=1e-36, Organism=Saccharomyces cerevisiae, GI6319426, Length=441, Percent_Identity=21.5419501133787, Blast_Score=124, Evalue=3e-29, Organism=Saccharomyces cerevisiae, GI6325449, Length=309, Percent_Identity=28.1553398058252, Blast_Score=76, Evalue=1e-14, Organism=Drosophila melanogaster, GI21357875, Length=427, Percent_Identity=30.2107728337237, Blast_Score=224, Evalue=9e-59, Organism=Drosophila melanogaster, GI24646943, Length=427, Percent_Identity=30.2107728337237, Blast_Score=224, Evalue=9e-59, Organism=Drosophila melanogaster, GI19921772, Length=451, Percent_Identity=25.9423503325942, Blast_Score=142, Evalue=4e-34, Organism=Drosophila melanogaster, GI24665395, Length=397, Percent_Identity=23.1738035264484, Blast_Score=80, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011249 - InterPro: IPR011237 - InterPro: IPR011765 - InterPro: IPR001431 - InterPro: IPR007863 [H]
Pfam domain/function: PF00675 Peptidase_M16; PF05193 Peptidase_M16_C [H]
EC number: 3.4.99.- [C]
Molecular weight: Translated: 47897; Mature: 47766
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: PS00143 INSULINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVECTRLKSGLTVVTETMPHLESVALGVWIKSGSRNETADEHGIAHLLEHMAFKGTGRR CCCCHHHHHCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHCCCCHH SARQIAEEIEDVGGEVNAATSTETTSYYARVLKDHVPLAVDILADILTESAFEEEELERE HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHH KQVILQEINAANDTPDDVVFDRFSEVAYRDQTLGRAILGTPETVVSFTPQQIRGYLGRNY HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHCCHHHHHHHHCCCC TTDRMFVVATGAVEHDEFVRMVEDRFASLPSEPSAPPVMEAARYIGGSVREPRDLMDAQI CCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCHHHHCHHH LLGFEGKPYHARDFYCSQILANILGGGMSSRLFQEVREFRGLCYSVYAFHWGFSDTGIFG EEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE IHAATGGENLPQLVPVIIDELHKSADQIHQKEIERARAQIRAQLLMGQESPASRAGQIAR EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH QMMLYGRPISNMEMMERLEGITIERLTDLAGRLFYDTVPTLSAIGPLEQLAPMEDITASL HHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHCC SVPAPKTMQAGR CCCCCCCCCCCC >Mature Secondary Structure TVECTRLKSGLTVVTETMPHLESVALGVWIKSGSRNETADEHGIAHLLEHMAFKGTGRR CCCHHHHHCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHCCCCHH SARQIAEEIEDVGGEVNAATSTETTSYYARVLKDHVPLAVDILADILTESAFEEEELERE HHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHH KQVILQEINAANDTPDDVVFDRFSEVAYRDQTLGRAILGTPETVVSFTPQQIRGYLGRNY HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHCCCCHHHHHCCHHHHHHHHCCCC TTDRMFVVATGAVEHDEFVRMVEDRFASLPSEPSAPPVMEAARYIGGSVREPRDLMDAQI CCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCHHHHCHHH LLGFEGKPYHARDFYCSQILANILGGGMSSRLFQEVREFRGLCYSVYAFHWGFSDTGIFG EEECCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE IHAATGGENLPQLVPVIIDELHKSADQIHQKEIERARAQIRAQLLMGQESPASRAGQIAR EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH QMMLYGRPISNMEMMERLEGITIERLTDLAGRLFYDTVPTLSAIGPLEQLAPMEDITASL HHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHCC SVPAPKTMQAGR CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: Zn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Endopeptidases of unknown catalytic mechanism [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA