| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is 209548207
Identifier: 209548207
GI number: 209548207
Start: 626989
End: 627630
Strand: Reverse
Name: 209548207
Synonym: Rleg2_0601
Alternate gene names: NA
Gene position: 627630-626989 (Counterclockwise)
Preceding gene: 209548214
Following gene: 209548205
Centisome position: 13.83
GC content: 66.67
Gene sequence:
>642_bases ATGGGTTTCCGTTCCCTCGCGCAGTCGCTTCTCGTGACTGCCAGCATCGCGGCCGCGGCGACGACGCCCGTTTTCGCACA GCAGCAACCGACGCCGACGCCGGCCAAGCCGCCGGCTGCGGCCCCTGCCCCTGCTCCCGCTACGACGCCGCAGCAGCCGA GCGTGGCCAATCCGAATATCCAGGTGACCCCCGGCCAGACCCAGCCGCAGGCGCCGGGCACGGTGAAATCCAATCACGGC GCATGGTCCGTCGTCTGCGACAAGCCGGCCGGTGCTGCGACCGAACAATGCGCGCTGATGCAGAACGTCATCGCCGAGGA TCGGCCGGAGGTCGGGCTTTCCGTCGTCGTCCTGAAGACGGCCGACCGCAAATCGAAGATTCTCCGCGTGCTCGCACCGC TCGGCGTGCTGCTGCCGAACGGCCTCGGCCTCAATGTCGACGGCAAGGATATCGGCCGCGCCTATTTCGTCCGCTGCTTC GCCGATGGCTGTTATGCCGAGGTCGTGCTCGAAGACGAGCTGCTGAAGACCTTCCGCAGCGGCGCCCAGGCGACCTTCAT CGTCTTCCAGACTCCCGAAGAAGGCATCGGCATCCCCGTCGACCTCAAGGGCTTCGCCGAAGGTTTTGACGCGCTGCCTT GA
Upstream 100 bases:
>100_bases AATTTCCGCCGCAGTCCCCCGGTTTTCACGGGGTGGGGCTTTTCATTTTTGGTGGGCAGCTTCAACAATAGCCGCAATGA TTCGATATCCAGAGGTTTCC
Downstream 100 bases:
>100_bases GGGCAGCTGGCGGCCTGCCGCGGGTCCGCCCCTCATCCGCCTGCCGGCACCTTCTCCCCGTAAACGGGGCGAAGGGGATA TGCGGCACCTCTCGGTCCCC
Product: invasion associated locus B family protein
Products: NA
Alternate protein names: Invasion Associated Locus B; Invasion Associated Locus B Protein; Invasion Protein B
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MGFRSLAQSLLVTASIAAAATTPVFAQQQPTPTPAKPPAAAPAPAPATTPQQPSVANPNIQVTPGQTQPQAPGTVKSNHG AWSVVCDKPAGAATEQCALMQNVIAEDRPEVGLSVVVLKTADRKSKILRVLAPLGVLLPNGLGLNVDGKDIGRAYFVRCF ADGCYAEVVLEDELLKTFRSGAQATFIVFQTPEEGIGIPVDLKGFAEGFDALP
Sequences:
>Translated_213_residues MGFRSLAQSLLVTASIAAAATTPVFAQQQPTPTPAKPPAAAPAPAPATTPQQPSVANPNIQVTPGQTQPQAPGTVKSNHG AWSVVCDKPAGAATEQCALMQNVIAEDRPEVGLSVVVLKTADRKSKILRVLAPLGVLLPNGLGLNVDGKDIGRAYFVRCF ADGCYAEVVLEDELLKTFRSGAQATFIVFQTPEEGIGIPVDLKGFAEGFDALP >Mature_212_residues GFRSLAQSLLVTASIAAAATTPVFAQQQPTPTPAKPPAAAPAPAPATTPQQPSVANPNIQVTPGQTQPQAPGTVKSNHGA WSVVCDKPAGAATEQCALMQNVIAEDRPEVGLSVVVLKTADRKSKILRVLAPLGVLLPNGLGLNVDGKDIGRAYFVRCFA DGCYAEVVLEDELLKTFRSGAQATFIVFQTPEEGIGIPVDLKGFAEGFDALP
Specific function: Unknown
COG id: COG5342
COG function: function code R; Invasion protein B, involved in pathogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22126; Mature: 21994
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFRSLAQSLLVTASIAAAATTPVFAQQQPTPTPAKPPAAAPAPAPATTPQQPSVANPNI CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE QVTPGQTQPQAPGTVKSNHGAWSVVCDKPAGAATEQCALMQNVIAEDRPEVGLSVVVLKT EEECCCCCCCCCCCEECCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEC ADRKSKILRVLAPLGVLLPNGLGLNVDGKDIGRAYFVRCFADGCYAEVVLEDELLKTFRS CCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHC GAQATFIVFQTPEEGIGIPVDLKGFAEGFDALP CCCEEEEEEECCCCCCCCCEEHHHHHHHHCCCC >Mature Secondary Structure GFRSLAQSLLVTASIAAAATTPVFAQQQPTPTPAKPPAAAPAPAPATTPQQPSVANPNI CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE QVTPGQTQPQAPGTVKSNHGAWSVVCDKPAGAATEQCALMQNVIAEDRPEVGLSVVVLKT EEECCCCCCCCCCCEECCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEC ADRKSKILRVLAPLGVLLPNGLGLNVDGKDIGRAYFVRCFADGCYAEVVLEDELLKTFRS CCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHC GAQATFIVFQTPEEGIGIPVDLKGFAEGFDALP CCCEEEEEEECCCCCCCCCEEHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA