Click here to switch to the map view.

The map label for this gene is yhhW [C]

Identifier: 209548172

GI number: 209548172

Start: 591337

End: 592260

Strand: Reverse

Name: yhhW [C]

Synonym: Rleg2_0566

Alternate gene names: 209548172

Gene position: 592260-591337 (Counterclockwise)

Preceding gene: 209548174

Following gene: 209548170

Centisome position: 13.05

GC content: 62.12

Gene sequence:

>924_bases
ATGTCCTTCTTTCCCGGTAAAGATCCGCTGCCCGGCGATGCCTTCGCCTGTGATGCGATCGAGAACCTGATCATTCCGCG
CACCAGCGATATCGGTGGTTTCCAGGTGCGGCGGGCGCTACCGACGCGGCAGCGGCGGCTGGTCGGGCCGTTCATCTTCT
TCGACCGCATGGGGCCGGCGATCCTGAAACCGAACGAGGCGCTCGACGTGAAGCCGCATCCGCATATCGGCCTGTCGACG
GTTACCTATCTCTTCGACGGCGAGATCCGCCATCGCGACAGCCTCGGCACCGAAAAGGTCATCCGTCCCGGCGATATCAA
CCTGATGACGGCAGGCCGCGGCATCGTGCATTCCGAGCGCACGCCCGATAATCTGCGCGGCCATCCGCTGCTGATGTCGG
GGCTGCAGACCTGGTTGGCGCTGCCCGACGACAAGGAGGAGATCGATCCTTCCTTCGCCCATACGGAAAAGTCTGACATG
CCGCTGATCGAGACTGCAGGCGTGCGCGGGCGCGTGGTCATCGGCTCGTTCGAAGGCATGACATCGCCGGTCGGGGTTTT
TTCCGACACGCTCTATGTCGATCTCAGCCTGCAGCCGGGCGCCAAATTTCCTTTCGGCGCAGCGCATGAAGAGCGCGCCG
TCTACGTACTGTCAGGCGAGGTCGTCATCTCAGGCGACCGCTTCGCCGCCGATCAACTGCTGGTCTTCCGGCCGGGCGAT
CCGATCACGCTCGAAGCCGGCAGCGACGGCTGTCATCTGATGCTGTTCGGCGGTGCGGCGCTGAATTCGAAACGTTATAT
CTGGTGGAATTTCGTTTCCTCCTCGAAGGAGCGGATCGAAAAAGCCAAGGAGGAATGGCGCAGCGGCCGCTTCGATATCG
TTCCCGGCGACGAAGAGGAATTCGTGCCTTTGCCGGAAGGCTGA

Upstream 100 bases:

>100_bases
GCAGACGTGGAAACGTGTTGGACGCGCCGAAGGATGGTGATGTTGGACGCGCGGCGCTCCAGGCGCTATGTCTAGCCGAT
ACAGAGATCGGAGATGCGTC

Downstream 100 bases:

>100_bases
CGGCGGCAATGATCGGCCGCCGCCGGTCATTTGCCTTTGAATTTCAACCGGCCGCGAAATAGCGCGTCAGCGCACCCTTC
GTGCGGTTGACATAGCCATC

Product: pirin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MSFFPGKDPLPGDAFACDAIENLIIPRTSDIGGFQVRRALPTRQRRLVGPFIFFDRMGPAILKPNEALDVKPHPHIGLST
VTYLFDGEIRHRDSLGTEKVIRPGDINLMTAGRGIVHSERTPDNLRGHPLLMSGLQTWLALPDDKEEIDPSFAHTEKSDM
PLIETAGVRGRVVIGSFEGMTSPVGVFSDTLYVDLSLQPGAKFPFGAAHEERAVYVLSGEVVISGDRFAADQLLVFRPGD
PITLEAGSDGCHLMLFGGAALNSKRYIWWNFVSSSKERIEKAKEEWRSGRFDIVPGDEEEFVPLPEG

Sequences:

>Translated_307_residues
MSFFPGKDPLPGDAFACDAIENLIIPRTSDIGGFQVRRALPTRQRRLVGPFIFFDRMGPAILKPNEALDVKPHPHIGLST
VTYLFDGEIRHRDSLGTEKVIRPGDINLMTAGRGIVHSERTPDNLRGHPLLMSGLQTWLALPDDKEEIDPSFAHTEKSDM
PLIETAGVRGRVVIGSFEGMTSPVGVFSDTLYVDLSLQPGAKFPFGAAHEERAVYVLSGEVVISGDRFAADQLLVFRPGD
PITLEAGSDGCHLMLFGGAALNSKRYIWWNFVSSSKERIEKAKEEWRSGRFDIVPGDEEEFVPLPEG
>Mature_306_residues
SFFPGKDPLPGDAFACDAIENLIIPRTSDIGGFQVRRALPTRQRRLVGPFIFFDRMGPAILKPNEALDVKPHPHIGLSTV
TYLFDGEIRHRDSLGTEKVIRPGDINLMTAGRGIVHSERTPDNLRGHPLLMSGLQTWLALPDDKEEIDPSFAHTEKSDMP
LIETAGVRGRVVIGSFEGMTSPVGVFSDTLYVDLSLQPGAKFPFGAAHEERAVYVLSGEVVISGDRFAADQLLVFRPGDP
ITLEAGSDGCHLMLFGGAALNSKRYIWWNFVSSSKERIEKAKEEWRSGRFDIVPGDEEEFVPLPEG

Specific function: Unknown

COG id: COG1741

COG function: function code R; Pirin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pirin family [H]

Homologues:

Organism=Homo sapiens, GI66363697, Length=268, Percent_Identity=29.4776119402985, Blast_Score=102, Evalue=3e-22,
Organism=Homo sapiens, GI4505823, Length=268, Percent_Identity=29.4776119402985, Blast_Score=102, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR012093
- InterPro:   IPR008778
- InterPro:   IPR003829
- InterPro:   IPR014710 [H]

Pfam domain/function: PF02678 Pirin; PF05726 Pirin_C [H]

EC number: NA

Molecular weight: Translated: 33856; Mature: 33725

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFFPGKDPLPGDAFACDAIENLIIPRTSDIGGFQVRRALPTRQRRLVGPFIFFDRMGPA
CCCCCCCCCCCCCCEEHHHHHHHCCCCCCCCCCEEEEHHCCHHHHHHHCCEEEECCCCCE
ILKPNEALDVKPHPHIGLSTVTYLFDGEIRHRDSLGTEKVIRPGDINLMTAGRGIVHSER
EECCCCCCCCCCCCCCCCEEEEEEECCCEECCCCCCCCCEECCCCEEEEECCCCEEECCC
TPDNLRGHPLLMSGLQTWLALPDDKEEIDPSFAHTEKSDMPLIETAGVRGRVVIGSFEGM
CCCCCCCCHHHHHHHHHHHCCCCCHHHCCCCHHCCCCCCCCEEEECCCCCEEEEEECCCC
TSPVGVFSDTLYVDLSLQPGAKFPFGAAHEERAVYVLSGEVVISGDRFAADQLLVFRPGD
CCCCCEECCEEEEEEEECCCCCCCCCCCCCCCEEEEEECCEEEECCCCCCCEEEEECCCC
PITLEAGSDGCHLMLFGGAALNSKRYIWWNFVSSSKERIEKAKEEWRSGRFDIVPGDEEE
CEEEEECCCCCEEEEECCEEECCCEEEEEEECCCHHHHHHHHHHHHHCCCEEECCCCCCC
FVPLPEG
EECCCCC
>Mature Secondary Structure 
SFFPGKDPLPGDAFACDAIENLIIPRTSDIGGFQVRRALPTRQRRLVGPFIFFDRMGPA
CCCCCCCCCCCCCEEHHHHHHHCCCCCCCCCCEEEEHHCCHHHHHHHCCEEEECCCCCE
ILKPNEALDVKPHPHIGLSTVTYLFDGEIRHRDSLGTEKVIRPGDINLMTAGRGIVHSER
EECCCCCCCCCCCCCCCCEEEEEEECCCEECCCCCCCCCEECCCCEEEEECCCCEEECCC
TPDNLRGHPLLMSGLQTWLALPDDKEEIDPSFAHTEKSDMPLIETAGVRGRVVIGSFEGM
CCCCCCCCHHHHHHHHHHHCCCCCHHHCCCCHHCCCCCCCCEEEECCCCCEEEEEECCCC
TSPVGVFSDTLYVDLSLQPGAKFPFGAAHEERAVYVLSGEVVISGDRFAADQLLVFRPGD
CCCCCEECCEEEEEEEECCCCCCCCCCCCCCCEEEEEECCEEEECCCCCCCEEEEECCCC
PITLEAGSDGCHLMLFGGAALNSKRYIWWNFVSSSKERIEKAKEEWRSGRFDIVPGDEEE
CEEEEECCCCCEEEEECCEEECCCEEEEEEECCCHHHHHHHHHHHHHCCCEEECCCCCCC
FVPLPEG
EECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11259647 [H]