| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is 209548148
Identifier: 209548148
GI number: 209548148
Start: 561187
End: 561999
Strand: Direct
Name: 209548148
Synonym: Rleg2_0542
Alternate gene names: NA
Gene position: 561187-561999 (Clockwise)
Preceding gene: 209548147
Following gene: 209548149
Centisome position: 12.37
GC content: 62.24
Gene sequence:
>813_bases GTGTCTCATCGATCAATCGTATCGATCTCTTTGGCTATTGCCTTTATATCTTTCGGTTCAGCGGCGGCGCAGGAAAGCGG CCAGCATTTCTGGTCGGGCGACTGGTATCTGAACGTCGGCGTCGCCGGCTTCTCGGCGCCGAAATTCGAGGGCTCGTCGC ACAATGAATTCAAGTTCAGCCCGCTGATTTCTGTCGGTCGCCAAGGCGCCGGCCCGCGCTTTTCCTCGCGCAACGACAAC CCCTCCTTCGCCCTGATCGACAAGGGCGCCTTCCGCGCCGGCATCGTCGGCAAGTTTGTGCCGTCGCGTGACGACGGCGA TGGCCACGAGCTGAAGGGCTTGAGAAAGGTCAAATGGGGGGCTGAAGCCGGCGGCTTCGTCGAAGTTTACCCGACCGACT TCCTGCGCGCCCGCGCCGAAGTCCGCCAGGGCATCCGCTCCCATGACGGCGTTGTCGCCGATCTCGCGATCGACGCCTTC ACCGATATCACGCCCGACCTGCAACTGTCGGGCGGCCCGCGCGCGACATTTGCGACAAGGGGCTATTACGATGCCTATTA CGGCGTCAGCGCCAAGCACGCCGCCGAAAGCGGCCTTGATCCTTACAAGCCGACGGCAGGCATGCAGTCTTATGGCGCCG GCGCAGCACTGACATGGAAGGCGACCGAAAATCTTTCGGCAAGCTCCTTCCTCGAATATAAGCGGCTGGCCGGTCCCGCC GCCGACAGCAGCCTGGTGCGCGACCGCGGCTCGAAGAACCAGGTGCTGATCGGCGTCTCGGCGACCTACAAGTTCAATTT CTCCCTGCAGTGA
Upstream 100 bases:
>100_bases CCTTTGTTCCCCGTGGTTAACATTGGGGTAACGACCTCGCGATAAATGTAACCGTCGCCGCTCTCCGCGGCTTTGTTTTT GCGTTTTCTGGAGTGCGGAC
Downstream 100 bases:
>100_bases TCCAATGCATGTCGCCCGGAAGTGTGTAGCGGTTCCGGGATAACGACATGCATCAAACATCCAGAGCATGTCGCCCGGAA GTGCGTAGCGGTTCCGGGAT
Product: MltA-interacting MipA family protein
Products: NA
Alternate protein names: MltA-Interacting MipA; MltA-Interacting Protein MipA; Outer Membrane Protein; MltA-Interacting Protein; Signal Peptide Protein; MipA Family Outer Membrane Scaffold Protein
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MSHRSIVSISLAIAFISFGSAAAQESGQHFWSGDWYLNVGVAGFSAPKFEGSSHNEFKFSPLISVGRQGAGPRFSSRNDN PSFALIDKGAFRAGIVGKFVPSRDDGDGHELKGLRKVKWGAEAGGFVEVYPTDFLRARAEVRQGIRSHDGVVADLAIDAF TDITPDLQLSGGPRATFATRGYYDAYYGVSAKHAAESGLDPYKPTAGMQSYGAGAALTWKATENLSASSFLEYKRLAGPA ADSSLVRDRGSKNQVLIGVSATYKFNFSLQ
Sequences:
>Translated_270_residues MSHRSIVSISLAIAFISFGSAAAQESGQHFWSGDWYLNVGVAGFSAPKFEGSSHNEFKFSPLISVGRQGAGPRFSSRNDN PSFALIDKGAFRAGIVGKFVPSRDDGDGHELKGLRKVKWGAEAGGFVEVYPTDFLRARAEVRQGIRSHDGVVADLAIDAF TDITPDLQLSGGPRATFATRGYYDAYYGVSAKHAAESGLDPYKPTAGMQSYGAGAALTWKATENLSASSFLEYKRLAGPA ADSSLVRDRGSKNQVLIGVSATYKFNFSLQ >Mature_269_residues SHRSIVSISLAIAFISFGSAAAQESGQHFWSGDWYLNVGVAGFSAPKFEGSSHNEFKFSPLISVGRQGAGPRFSSRNDNP SFALIDKGAFRAGIVGKFVPSRDDGDGHELKGLRKVKWGAEAGGFVEVYPTDFLRARAEVRQGIRSHDGVVADLAIDAFT DITPDLQLSGGPRATFATRGYYDAYYGVSAKHAAESGLDPYKPTAGMQSYGAGAALTWKATENLSASSFLEYKRLAGPAA DSSLVRDRGSKNQVLIGVSATYKFNFSLQ
Specific function: Unknown
COG id: COG3713
COG function: function code M; Outer membrane protein V
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28894; Mature: 28763
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHRSIVSISLAIAFISFGSAAAQESGQHFWSGDWYLNVGVAGFSAPKFEGSSHNEFKFS CCCCCEEHHHHHHHHHHCCCHHHHHCCCEEECCCEEEEEEEECCCCCCCCCCCCCCEEEC PLISVGRQGAGPRFSSRNDNPSFALIDKGAFRAGIVGKFVPSRDDGDGHELKGLRKVKWG HHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHCCHHEEECC AEAGGFVEVYPTDFLRARAEVRQGIRSHDGVVADLAIDAFTDITPDLQLSGGPRATFATR CCCCCEEEECCHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHCCCCCEEECCCCCEEEEEC GYYDAYYGVSAKHAAESGLDPYKPTAGMQSYGAGAALTWKATENLSASSFLEYKRLAGPA CCCHHHCCCCHHHHHHCCCCCCCCCCCCHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCC ADSSLVRDRGSKNQVLIGVSATYKFNFSLQ CCHHHHHCCCCCCEEEEEEEEEEEEEEEEC >Mature Secondary Structure SHRSIVSISLAIAFISFGSAAAQESGQHFWSGDWYLNVGVAGFSAPKFEGSSHNEFKFS CCCCEEHHHHHHHHHHCCCHHHHHCCCEEECCCEEEEEEEECCCCCCCCCCCCCCEEEC PLISVGRQGAGPRFSSRNDNPSFALIDKGAFRAGIVGKFVPSRDDGDGHELKGLRKVKWG HHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHCCHHEEECC AEAGGFVEVYPTDFLRARAEVRQGIRSHDGVVADLAIDAFTDITPDLQLSGGPRATFATR CCCCCEEEECCHHHHHHHHHHHHHHHHCCCEEEEEEHHHHHCCCCCEEECCCCCEEEEEC GYYDAYYGVSAKHAAESGLDPYKPTAGMQSYGAGAALTWKATENLSASSFLEYKRLAGPA CCCHHHCCCCHHHHHHCCCCCCCCCCCCHHCCCCEEEEEECCCCCCHHHHHHHHHHCCCC ADSSLVRDRGSKNQVLIGVSATYKFNFSLQ CCHHHHHCCCCCCEEEEEEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA