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The map label for this gene is ahyR [H]

Identifier: 209548111

GI number: 209548111

Start: 519056

End: 519790

Strand: Direct

Name: ahyR [H]

Synonym: Rleg2_0505

Alternate gene names: 209548111

Gene position: 519056-519790 (Clockwise)

Preceding gene: 209548110

Following gene: 209548112

Centisome position: 11.44

GC content: 60.27

Gene sequence:

>735_bases
ATGGCACCCTTGTCGCAAACATCCCAGGAAGACGACGACTACATCAAGGAAATAGCCGGCCTGAAGACCCAGTTCGATAT
TTTCCGGTTCCTGAAACGTGTGACGGAAGCCTATCGCAGCCGTGCCTTCCTGGTTCTCAACCTGCCGCCGATCACCTCCC
TGGATATCCAGGGCAGCACCGTGATCACCAGCTGGCCGGCCGAGCTTCTGGCGCTCTACGACCAGGAGGGACTGCTGGTC
AACAGCCCGGTTCTCAGGCGGCTCAGAACATCGGCGCGGCCCTTTTTCTACGACATGTCGCGTGAGAACTGGTCGCGCGA
CGACGGCAAGTCGATCCTCGTCGCCTCGCTGTTTGAACGTTTCAGGATGATGCGCGGCGCCTATTTCCCGACGCATGAGC
CATCCGGCGTGCGCGGCGCCATCTCTTTCGCCGGCGACCGCGAGCCCTTCAGCCCGGCGGAGATGCGTGAGCTCTGCTAT
ATCTCCATCCATGTTTATGACAGGCTCGCCGAGATCCGCAACCTCGATACGCGCATCACGGATACGCTGACCGACCGGGA
AATCGATTGCCTCAACTGGACGGCGGCCGGCAAGACCAGTGCGGAAATCGCCGAAATCCTCACCCTCTCCGAGCACACGG
TCAATCACTATCTCAACCGTGCCACCAAGAAGCTCGATACGGTCAACCGCACCCAGGCGGTGGCCAAGGCGCTGCGGATC
GGCCTGATCAAATAA

Upstream 100 bases:

>100_bases
CAACGCCTCTACGGCGAGGCCGATTCCATGTGATCCAATCAGCGATCGTCATTCCCCGAAGCAATCGAACCGGCCGTTGC
GCCGAAGATGAAGAAATGTG

Downstream 100 bases:

>100_bases
GGTGCAAAAGGCATGGCGGCTGGTCGCCGGGCGCCCAGCGCGTGAGCATATGCCGGCCGCTTCCGGCCATCCTCGCGCCG
CGCCGGTGCCATTTGCGCCG

Product: LuxR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MAPLSQTSQEDDDYIKEIAGLKTQFDIFRFLKRVTEAYRSRAFLVLNLPPITSLDIQGSTVITSWPAELLALYDQEGLLV
NSPVLRRLRTSARPFFYDMSRENWSRDDGKSILVASLFERFRMMRGAYFPTHEPSGVRGAISFAGDREPFSPAEMRELCY
ISIHVYDRLAEIRNLDTRITDTLTDREIDCLNWTAAGKTSAEIAEILTLSEHTVNHYLNRATKKLDTVNRTQAVAKALRI
GLIK

Sequences:

>Translated_244_residues
MAPLSQTSQEDDDYIKEIAGLKTQFDIFRFLKRVTEAYRSRAFLVLNLPPITSLDIQGSTVITSWPAELLALYDQEGLLV
NSPVLRRLRTSARPFFYDMSRENWSRDDGKSILVASLFERFRMMRGAYFPTHEPSGVRGAISFAGDREPFSPAEMRELCY
ISIHVYDRLAEIRNLDTRITDTLTDREIDCLNWTAAGKTSAEIAEILTLSEHTVNHYLNRATKKLDTVNRTQAVAKALRI
GLIK
>Mature_243_residues
APLSQTSQEDDDYIKEIAGLKTQFDIFRFLKRVTEAYRSRAFLVLNLPPITSLDIQGSTVITSWPAELLALYDQEGLLVN
SPVLRRLRTSARPFFYDMSRENWSRDDGKSILVASLFERFRMMRGAYFPTHEPSGVRGAISFAGDREPFSPAEMRELCYI
SIHVYDRLAEIRNLDTRITDTLTDREIDCLNWTAAGKTSAEIAEILTLSEHTVNHYLNRATKKLDTVNRTQAVAKALRIG
LIK

Specific function: Functions as a BHL-responsive transcriptional regulator [H]

COG id: COG2771

COG function: function code K; DNA-binding HTH domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH luxR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788224, Length=191, Percent_Identity=29.8429319371728, Blast_Score=61, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016032
- InterPro:   IPR005143
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03472 Autoind_bind; PF00196 GerE [H]

EC number: NA

Molecular weight: Translated: 27839; Mature: 27708

Theoretical pI: Translated: 7.57; Mature: 7.57

Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPLSQTSQEDDDYIKEIAGLKTQFDIFRFLKRVTEAYRSRAFLVLNLPPITSLDIQGST
CCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEECCCCCE
VITSWPAELLALYDQEGLLVNSPVLRRLRTSARPFFYDMSRENWSRDDGKSILVASLFER
EEEHHHHHHHHHHCCCCEEECCHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHH
FRMMRGAYFPTHEPSGVRGAISFAGDREPFSPAEMRELCYISIHVYDRLAEIRNLDTRIT
HHHHHCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
DTLTDREIDCLNWTAAGKTSAEIAEILTLSEHTVNHYLNRATKKLDTVNRTQAVAKALRI
HHHCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLIK
CCCC
>Mature Secondary Structure 
APLSQTSQEDDDYIKEIAGLKTQFDIFRFLKRVTEAYRSRAFLVLNLPPITSLDIQGST
CCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEECCCCCE
VITSWPAELLALYDQEGLLVNSPVLRRLRTSARPFFYDMSRENWSRDDGKSILVASLFER
EEEHHHHHHHHHHCCCCEEECCHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHH
FRMMRGAYFPTHEPSGVRGAISFAGDREPFSPAEMRELCYISIHVYDRLAEIRNLDTRIT
HHHHHCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
DTLTDREIDCLNWTAAGKTSAEIAEILTLSEHTVNHYLNRATKKLDTVNRTQAVAKALRI
HHHCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLIK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9286976 [H]