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The map label for this gene is yagI [H]

Identifier: 209548110

GI number: 209548110

Start: 518053

End: 518853

Strand: Direct

Name: yagI [H]

Synonym: Rleg2_0504

Alternate gene names: 209548110

Gene position: 518053-518853 (Clockwise)

Preceding gene: 209548104

Following gene: 209548111

Centisome position: 11.42

GC content: 63.92

Gene sequence:

>801_bases
ATGATGAATTCAAATAGCCAAAGCATGGTGCAGAGCCGCGAGACCGGCACGCTCGGCAAACTGATGGTTCTGCTCGATCT
CGTCACCCATGCCGACGCGCCGCTGCGTTTCACCGAGATCCTGGCCCTTGCCGGCCAGCCGCGCGGCACCTTGCATCGCC
AGTTGAGCCATCTGGTGGAGGAAGGGCTGCTTGAGCTTGATGGCGACGGCCGTTACGCGCCGGGCCTGCGCCTGCTCGAT
TTTGCCGCGCGCAGCTGGGCGCGCAACGAATTCCGGCTGATTGCCGAGCCGCACCTTGCCGATCTGCAGCAGGCGACCGG
CGAGACGGTGCATCTCGGTGTTTTGAGGGGCCAGTCGATCATCTATCTCGACAAGGTCGACGGCCGTCAGCCGGTGCGCA
TGTATTCGCAGATCGGCAACGCCTCGCCCTGTTACTGCACCGGCGTCGGCAAGGCCGCCCTGTCGCTGCTTCCGGCCGAT
CTTCTCGCCGATCTTCTCGCCGGCCTGAACTTCACCCGCTTTACCGCCTCGACCCATCTCTCGGCCGAATCGCTGCTTGC
CGAAATCCGCGAGATCACCGACCAGGGCTTTGCCTTCGACCGCGAGGAGCATGAAGCCGGCATCCGCTGTGTCGCCGCCC
CGCTCTGGTCGCAGGATCGGGCCTTTATCGGGGGCATTTCGATTACCGGCCCGGCCTATCGTCTGTCGATGGAACTTCTG
CGCCAATGGTCCGTTCCAGTTCAGCTGGCAGCTGGGAGGATCATGGACGACATGCGCATTCGGCTCGGCCCGCGCCGCTA
A

Upstream 100 bases:

>100_bases
CGTCGCCTTTTGATATTCGATAGCGTTCCATTATTTGGAACTATATTTGACTATATGGAATTATCGAATTATGCTGGCCT
TGCTGTCAAGGGCGGACGAG

Downstream 100 bases:

>100_bases
ATGCAATCGGAGAGCATGCTTATGATGAGGGCGATATTGAGATTTTCCGGCGAATCACGACAACTGTAAATAGTCCGCGA
AATCGAAAACCACTCACCGG

Product: IclR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MMNSNSQSMVQSRETGTLGKLMVLLDLVTHADAPLRFTEILALAGQPRGTLHRQLSHLVEEGLLELDGDGRYAPGLRLLD
FAARSWARNEFRLIAEPHLADLQQATGETVHLGVLRGQSIIYLDKVDGRQPVRMYSQIGNASPCYCTGVGKAALSLLPAD
LLADLLAGLNFTRFTASTHLSAESLLAEIREITDQGFAFDREEHEAGIRCVAAPLWSQDRAFIGGISITGPAYRLSMELL
RQWSVPVQLAAGRIMDDMRIRLGPRR

Sequences:

>Translated_266_residues
MMNSNSQSMVQSRETGTLGKLMVLLDLVTHADAPLRFTEILALAGQPRGTLHRQLSHLVEEGLLELDGDGRYAPGLRLLD
FAARSWARNEFRLIAEPHLADLQQATGETVHLGVLRGQSIIYLDKVDGRQPVRMYSQIGNASPCYCTGVGKAALSLLPAD
LLADLLAGLNFTRFTASTHLSAESLLAEIREITDQGFAFDREEHEAGIRCVAAPLWSQDRAFIGGISITGPAYRLSMELL
RQWSVPVQLAAGRIMDDMRIRLGPRR
>Mature_266_residues
MMNSNSQSMVQSRETGTLGKLMVLLDLVTHADAPLRFTEILALAGQPRGTLHRQLSHLVEEGLLELDGDGRYAPGLRLLD
FAARSWARNEFRLIAEPHLADLQQATGETVHLGVLRGQSIIYLDKVDGRQPVRMYSQIGNASPCYCTGVGKAALSLLPAD
LLADLLAGLNFTRFTASTHLSAESLLAEIREITDQGFAFDREEHEAGIRCVAAPLWSQDRAFIGGISITGPAYRLSMELL
RQWSVPVQLAAGRIMDDMRIRLGPRR

Specific function: Transcriptional Regulator Of The Kdgk Gene For The Kdg Kinase And The Kdgt Gene For The Kdg Permease. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 iclR-ED (iclR effector binding) domain [H]

Homologues:

Organism=Escherichia coli, GI1788131, Length=223, Percent_Identity=32.2869955156951, Blast_Score=130, Evalue=7e-32,
Organism=Escherichia coli, GI1786468, Length=213, Percent_Identity=32.8638497652582, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI87082359, Length=241, Percent_Identity=28.2157676348548, Blast_Score=103, Evalue=8e-24,
Organism=Escherichia coli, GI1788581, Length=230, Percent_Identity=26.9565217391304, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1786715, Length=167, Percent_Identity=26.3473053892216, Blast_Score=84, Evalue=7e-18,
Organism=Escherichia coli, GI1790752, Length=236, Percent_Identity=26.271186440678, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI1789999, Length=266, Percent_Identity=22.9323308270677, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014757
- InterPro:   IPR005471
- InterPro:   IPR011991 [H]

Pfam domain/function: PF09339 HTH_IclR; PF01614 IclR [H]

EC number: NA

Molecular weight: Translated: 29274; Mature: 29274

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: PS51077 HTH_ICLR ; PS51078 ICLR_ED

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNSNSQSMVQSRETGTLGKLMVLLDLVTHADAPLRFTEILALAGQPRGTLHRQLSHLVE
CCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHH
EGLLELDGDGRYAPGLRLLDFAARSWARNEFRLIAEPHLADLQQATGETVHLGVLRGQSI
HCCEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCEEEEEEECCCEE
IYLDKVDGRQPVRMYSQIGNASPCYCTGVGKAALSLLPADLLADLLAGLNFTRFTASTHL
EEEECCCCCCHHHHHHHCCCCCCEEEECHHHHHHHHCCHHHHHHHHHCCCCCEEEHHHCC
SAESLLAEIREITDQGFAFDREEHEAGIRCVAAPLWSQDRAFIGGISITGPAYRLSMELL
CHHHHHHHHHHHHHCCCCCCCHHHHCCCEEEECCCCCCCCEEECCEEECCHHHHHHHHHH
RQWSVPVQLAAGRIMDDMRIRLGPRR
HHCCCCHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MMNSNSQSMVQSRETGTLGKLMVLLDLVTHADAPLRFTEILALAGQPRGTLHRQLSHLVE
CCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHH
EGLLELDGDGRYAPGLRLLDFAARSWARNEFRLIAEPHLADLQQATGETVHLGVLRGQSI
HCCEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCEEEEEEECCCEE
IYLDKVDGRQPVRMYSQIGNASPCYCTGVGKAALSLLPADLLADLLAGLNFTRFTASTHL
EEEECCCCCCHHHHHHHCCCCCCEEEECHHHHHHHHCCHHHHHHHHHCCCCCEEEHHHCC
SAESLLAEIREITDQGFAFDREEHEAGIRCVAAPLWSQDRAFIGGISITGPAYRLSMELL
CHHHHHHHHHHHHHCCCCCCCHHHHCCCEEEECCCCCCCCEEECCEEECCHHHHHHHHHH
RQWSVPVQLAAGRIMDDMRIRLGPRR
HHCCCCHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]