BacMap

Definition	Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome.
Accession	NC_011369
Length	4,537,948

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The map label for this gene is fabG [H]

Identifier: 209548109

GI number: 209548109

Start: 517188

End: 517949

Strand: Reverse

Name: fabG [H]

Synonym: Rleg2_0503

Alternate gene names: 209548109

Gene position: 517949-517188 (Counterclockwise)

Preceding gene: 209548115

Following gene: 209548108

Centisome position: 11.41

GC content: 61.94

Gene sequence:

>762_bases
ATGCCAGCACAATTTCCGGAGTTCAGAGACCGAACCGTGTTGGTGACCGGCGGCGGATCGGGCATCGGTGCTGCGATCGT
CGAAGGTTTCGCGCGCCAGGGCGCCAAGGTCTCCTTCATTGACATTGCCGAGGAAGCCGGCCGCGCGTTCGCCGAAAGGC
TGTCGCAGGAGACGGCGCATCCGGTTTCCTTTCACCATGCCGACCTTCGCGACATCGAGGCGATCCGGCGCACCGTCGAT
ACCGTCGTCGCCAATTCAGGGCCGATCCGCGTGCTTGTCAACAATGCCGCCTGGGACGACCGTCATGATTTCGACGCGGT
GACCGAGGCCTATTGGGACAACAATCAGGCAGTCAACCTGCGGCATGTGTTCTTCACCTCCCAGGCAGCAGCACCATCGA
TGCGGGCGGCCGGCGGCGGGGCGATCATCAATATGTCGTCGATCGCCTTCAAACTGAACATGGGCGGTTTTCCCGCCTAT
GCGGCGGCGAAAGCTGCAGTCGTCGGGCTGACGAAGAGCATGGCCGGCAGGCTGGGCCCGGAGAATATCCGCATCAACTG
CATTTTGCCCGGCATGGTCCTCACCGAACGGCAGATGCAGCTTTGGCTGACCGAAGAGAGCGTCGCGCGTTCGGTCGAGC
AGCAATGCCTGAAAGTCGCGCTCAAGCCCGACGCAATCGTCGGTCCCTGCCTGTTTCTTGCATCCGACTGCGCGGCGGGA
ATGACCGCCCAGTCCCTGATTGTCGATGGAGGCATTCTGTAA

Upstream 100 bases:

>100_bases
GTCCGCCCTTGACAGCAAGGCCAGCATAATTCGATAATTCCATATAGTCAAATATAGTTCCAAATAATGGAACGCTATCG
AATATCAAAAGGCGACGGCG

Downstream 100 bases:

>100_bases
TGGCTAATCCCGCTTATGTCGCGGTGGACTGGGGCACCAGCAGTTTTCGGCTCTGGTTGATCGGCAGGGACGGCAGCGTG
CTTGCCGAGCGCCGCAGCGG

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MPAQFPEFRDRTVLVTGGGSGIGAAIVEGFARQGAKVSFIDIAEEAGRAFAERLSQETAHPVSFHHADLRDIEAIRRTVD
TVVANSGPIRVLVNNAAWDDRHDFDAVTEAYWDNNQAVNLRHVFFTSQAAAPSMRAAGGGAIINMSSIAFKLNMGGFPAY
AAAKAAVVGLTKSMAGRLGPENIRINCILPGMVLTERQMQLWLTEESVARSVEQQCLKVALKPDAIVGPCLFLASDCAAG
MTAQSLIVDGGIL

Sequences:

>Translated_253_residues
MPAQFPEFRDRTVLVTGGGSGIGAAIVEGFARQGAKVSFIDIAEEAGRAFAERLSQETAHPVSFHHADLRDIEAIRRTVD
TVVANSGPIRVLVNNAAWDDRHDFDAVTEAYWDNNQAVNLRHVFFTSQAAAPSMRAAGGGAIINMSSIAFKLNMGGFPAY
AAAKAAVVGLTKSMAGRLGPENIRINCILPGMVLTERQMQLWLTEESVARSVEQQCLKVALKPDAIVGPCLFLASDCAAG
MTAQSLIVDGGIL
>Mature_252_residues
PAQFPEFRDRTVLVTGGGSGIGAAIVEGFARQGAKVSFIDIAEEAGRAFAERLSQETAHPVSFHHADLRDIEAIRRTVDT
VVANSGPIRVLVNNAAWDDRHDFDAVTEAYWDNNQAVNLRHVFFTSQAAAPSMRAAGGGAIINMSSIAFKLNMGGFPAYA
AAKAAVVGLTKSMAGRLGPENIRINCILPGMVLTERQMQLWLTEESVARSVEQQCLKVALKPDAIVGPCLFLASDCAAGM
TAQSLIVDGGIL

Specific function: Unknown

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI32483357, Length=245, Percent_Identity=31.8367346938775, Blast_Score=109, Evalue=2e-24,
Organism=Homo sapiens, GI15277342, Length=255, Percent_Identity=34.5098039215686, Blast_Score=102, Evalue=5e-22,
Organism=Homo sapiens, GI7705925, Length=244, Percent_Identity=34.8360655737705, Blast_Score=101, Evalue=6e-22,
Organism=Homo sapiens, GI126723750, Length=248, Percent_Identity=27.8225806451613, Blast_Score=93, Evalue=3e-19,
Organism=Homo sapiens, GI31542939, Length=229, Percent_Identity=31.0043668122271, Blast_Score=89, Evalue=5e-18,
Organism=Homo sapiens, GI66933014, Length=228, Percent_Identity=31.140350877193, Blast_Score=88, Evalue=6e-18,
Organism=Homo sapiens, GI19923817, Length=256, Percent_Identity=26.953125, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI10190704, Length=251, Percent_Identity=27.8884462151394, Blast_Score=78, Evalue=7e-15,
Organism=Homo sapiens, GI224922801, Length=169, Percent_Identity=32.5443786982249, Blast_Score=76, Evalue=2e-14,
Organism=Homo sapiens, GI4504505, Length=234, Percent_Identity=29.9145299145299, Blast_Score=74, Evalue=9e-14,
Organism=Homo sapiens, GI126723191, Length=182, Percent_Identity=31.3186813186813, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI302344755, Length=103, Percent_Identity=36.8932038834951, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI33667109, Length=191, Percent_Identity=30.3664921465969, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI109715829, Length=226, Percent_Identity=29.646017699115, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI40807363, Length=162, Percent_Identity=28.3950617283951, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI40254992, Length=244, Percent_Identity=27.0491803278689, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI5031737, Length=246, Percent_Identity=28.0487804878049, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI142976729, Length=198, Percent_Identity=27.2727272727273, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI4503817, Length=182, Percent_Identity=26.9230769230769, Blast_Score=65, Evalue=5e-11,
Organism=Escherichia coli, GI1789208, Length=249, Percent_Identity=35.7429718875502, Blast_Score=123, Evalue=1e-29,
Organism=Escherichia coli, GI1790717, Length=245, Percent_Identity=33.0612244897959, Blast_Score=117, Evalue=9e-28,
Organism=Escherichia coli, GI1786812, Length=253, Percent_Identity=30.4347826086957, Blast_Score=100, Evalue=7e-23,
Organism=Escherichia coli, GI87082100, Length=251, Percent_Identity=31.4741035856574, Blast_Score=97, Evalue=9e-22,
Organism=Escherichia coli, GI1787335, Length=245, Percent_Identity=30.6122448979592, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI87082160, Length=249, Percent_Identity=28.5140562248996, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1787905, Length=241, Percent_Identity=30.2904564315353, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1789378, Length=250, Percent_Identity=28, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI2367365, Length=244, Percent_Identity=29.5081967213115, Blast_Score=74, Evalue=7e-15,
Organism=Escherichia coli, GI1788459, Length=252, Percent_Identity=29.3650793650794, Blast_Score=74, Evalue=9e-15,
Organism=Escherichia coli, GI1787526, Length=202, Percent_Identity=26.7326732673267, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1789057, Length=257, Percent_Identity=27.2373540856031, Blast_Score=64, Evalue=9e-12,
Organism=Escherichia coli, GI2367175, Length=190, Percent_Identity=27.8947368421053, Blast_Score=62, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17555706, Length=252, Percent_Identity=34.5238095238095, Blast_Score=110, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI115534694, Length=252, Percent_Identity=31.3492063492063, Blast_Score=104, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI17561402, Length=258, Percent_Identity=29.4573643410853, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17560676, Length=246, Percent_Identity=29.6747967479675, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI25147288, Length=247, Percent_Identity=31.5789473684211, Blast_Score=97, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI193203115, Length=172, Percent_Identity=29.6511627906977, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17559104, Length=262, Percent_Identity=28.6259541984733, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI193203117, Length=182, Percent_Identity=28.021978021978, Blast_Score=81, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17568967, Length=237, Percent_Identity=29.1139240506329, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17562904, Length=269, Percent_Identity=28.6245353159851, Blast_Score=78, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17563726, Length=265, Percent_Identity=27.9245283018868, Blast_Score=77, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI17562910, Length=259, Percent_Identity=26.6409266409266, Blast_Score=77, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI17544670, Length=267, Percent_Identity=26.9662921348315, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17560150, Length=258, Percent_Identity=27.5193798449612, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI71994600, Length=246, Percent_Identity=28.0487804878049, Blast_Score=74, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI17567345, Length=183, Percent_Identity=27.8688524590164, Blast_Score=74, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI72000259, Length=261, Percent_Identity=29.1187739463602, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17562990, Length=266, Percent_Identity=28.1954887218045, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17531453, Length=279, Percent_Identity=29.7491039426523, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17551412, Length=268, Percent_Identity=27.9850746268657, Blast_Score=67, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI71994604, Length=248, Percent_Identity=28.2258064516129, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17564282, Length=166, Percent_Identity=28.3132530120482, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17538480, Length=261, Percent_Identity=28.735632183908, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17562908, Length=269, Percent_Identity=28.6245353159851, Blast_Score=64, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6322861, Length=242, Percent_Identity=29.3388429752066, Blast_Score=78, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6324126, Length=254, Percent_Identity=22.8346456692913, Blast_Score=67, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24643142, Length=195, Percent_Identity=37.9487179487179, Blast_Score=101, Evalue=4e-22,
Organism=Drosophila melanogaster, GI28571526, Length=249, Percent_Identity=30.5220883534137, Blast_Score=100, Evalue=9e-22,
Organism=Drosophila melanogaster, GI21357041, Length=251, Percent_Identity=29.4820717131474, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24639444, Length=246, Percent_Identity=31.3008130081301, Blast_Score=97, Evalue=8e-21,
Organism=Drosophila melanogaster, GI24644339, Length=248, Percent_Identity=28.2258064516129, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI21355319, Length=249, Percent_Identity=27.710843373494, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI23397609, Length=257, Percent_Identity=29.9610894941634, Blast_Score=82, Evalue=5e-16,
Organism=Drosophila melanogaster, GI24644337, Length=254, Percent_Identity=31.496062992126, Blast_Score=82, Evalue=5e-16,
Organism=Drosophila melanogaster, GI24581726, Length=261, Percent_Identity=27.5862068965517, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI281364892, Length=199, Percent_Identity=29.1457286432161, Blast_Score=71, Evalue=8e-13,
Organism=Drosophila melanogaster, GI21358495, Length=200, Percent_Identity=27, Blast_Score=69, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 26941; Mature: 26810

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAQFPEFRDRTVLVTGGGSGIGAAIVEGFARQGAKVSFIDIAEEAGRAFAERLSQETAH
CCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHCCC
PVSFHHADLRDIEAIRRTVDTVVANSGPIRVLVNNAAWDDRHDFDAVTEAYWDNNQAVNL
CCEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCEEEE
RHVFFTSQAAAPSMRAAGGGAIINMSSIAFKLNMGGFPAYAAAKAAVVGLTKSMAGRLGP
EEEEEECCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCC
ENIRINCILPGMVLTERQMQLWLTEESVARSVEQQCLKVALKPDAIVGPCLFLASDCAAG
CCEEEEEEECCHHHHCCHHHEEECHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
MTAQSLIVDGGIL
CCHHHHEECCCCC
>Mature Secondary Structure 
PAQFPEFRDRTVLVTGGGSGIGAAIVEGFARQGAKVSFIDIAEEAGRAFAERLSQETAH
CCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHCCC
PVSFHHADLRDIEAIRRTVDTVVANSGPIRVLVNNAAWDDRHDFDAVTEAYWDNNQAVNL
CCEECCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCEEEE
RHVFFTSQAAAPSMRAAGGGAIINMSSIAFKLNMGGFPAYAAAKAAVVGLTKSMAGRLGP
EEEEEECCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCC
ENIRINCILPGMVLTERQMQLWLTEESVARSVEQQCLKVALKPDAIVGPCLFLASDCAAG
CCEEEEEEECCHHHHCCHHHEEECHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
MTAQSLIVDGGIL
CCHHHHEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9784136 [H]