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The map label for this gene is dgoK [H]

Identifier: 209548108

GI number: 209548108

Start: 516274

End: 517188

Strand: Reverse

Name: dgoK [H]

Synonym: Rleg2_0502

Alternate gene names: 209548108

Gene position: 517188-516274 (Counterclockwise)

Preceding gene: 209548109

Following gene: 209548107

Centisome position: 11.4

GC content: 67.32

Gene sequence:

>915_bases
ATGGCTAATCCCGCTTATGTCGCGGTGGACTGGGGCACCAGCAGTTTTCGGCTCTGGTTGATCGGCAGGGACGGCAGCGT
GCTTGCCGAGCGCCGCAGCGGCGAAGGCATGACGAGTGCGGCAAAAACCGGCTTTTCCCAAGTGCTGGCAGGCCATCTCG
CCGCCGTCGAGGCGCCCGAGAACCTGCCGGTGATCATCTGCGGCATGGCCGGTGCACGGCAGGGCTGGGTCGAGGCCGGT
TATATCGACGTGCCGGCGCCGCTCGCCGCGATCCTGACTGCGGCAGTCTCCGTGCCGGGAGAAAGCCGCGACATCCGCAT
CCTGCCGGGGCTTGCCCAGCGGGATATGGCGACGCCCGACGTCATGCGCGGCGAGGAAACACAGCTTCTCGGCGCGCTCG
GCAACGCAAGCGCCGGCGCCCAGGCGGTCTGCATGCCCGGAACCCATTCGAAGTGGGTGCATGTGGGCGACGGCAAGGTC
ACCGGCTTTTCGACTTTCATGACCGGCGAACTGTTCGACGTCATCAGCAAACACACGATCCTTTCGCATGCCGTTGCCGG
TGCTCAGGAGCAGCCGGCCGATGCGGCGGCCTTCGAAGCGGCGGTCTCCGCGGCTTTCGCGCGGCCCGCGCTTGCCTCCA
ATCTGCTCTTTACCGCCCGCTCGGGCCAGCTCCTGCACGGGATCTCGGCCGCATCAGCGCAGGCCCGGCTCTCCGGCACG
CTGATCGGCCTCGAAATTGCCGGTGCGCTGCAAGATGCGGCCAACTCAGGCATTACGCTCGTCGCCTCCGGGCGCCTGCA
GGCGCTCTACGAACAGGCCTTCAAAACCCTCTCCCTTCCCTTCACCGCCATCGATGCGGACGCCGCCGTGCGCCGCGGGC
TTTCGGCCGCCGCCGAAGCCATCTGGCCGAATTGA

Upstream 100 bases:

>100_bases
TCAAGCCCGACGCAATCGTCGGTCCCTGCCTGTTTCTTGCATCCGACTGCGCGGCGGGAATGACCGCCCAGTCCCTGATT
GTCGATGGAGGCATTCTGTA

Downstream 100 bases:

>100_bases
GAAAGCCGACACGATGAACCGTATCCCCTTCCCCGACATGAAGCGCCCGCTGATCGCCATCCTTCGCGGCATCCGGCCCG
ACGAGACCGAAAGCGTGGTC

Product: 2-dehydro-3-deoxygalactonokinase

Products: NA

Alternate protein names: 2-keto-3-deoxy-galactonokinase; 2-oxo-3-deoxygalactonate kinase [H]

Number of amino acids: Translated: 304; Mature: 303

Protein sequence:

>304_residues
MANPAYVAVDWGTSSFRLWLIGRDGSVLAERRSGEGMTSAAKTGFSQVLAGHLAAVEAPENLPVIICGMAGARQGWVEAG
YIDVPAPLAAILTAAVSVPGESRDIRILPGLAQRDMATPDVMRGEETQLLGALGNASAGAQAVCMPGTHSKWVHVGDGKV
TGFSTFMTGELFDVISKHTILSHAVAGAQEQPADAAAFEAAVSAAFARPALASNLLFTARSGQLLHGISAASAQARLSGT
LIGLEIAGALQDAANSGITLVASGRLQALYEQAFKTLSLPFTAIDADAAVRRGLSAAAEAIWPN

Sequences:

>Translated_304_residues
MANPAYVAVDWGTSSFRLWLIGRDGSVLAERRSGEGMTSAAKTGFSQVLAGHLAAVEAPENLPVIICGMAGARQGWVEAG
YIDVPAPLAAILTAAVSVPGESRDIRILPGLAQRDMATPDVMRGEETQLLGALGNASAGAQAVCMPGTHSKWVHVGDGKV
TGFSTFMTGELFDVISKHTILSHAVAGAQEQPADAAAFEAAVSAAFARPALASNLLFTARSGQLLHGISAASAQARLSGT
LIGLEIAGALQDAANSGITLVASGRLQALYEQAFKTLSLPFTAIDADAAVRRGLSAAAEAIWPN
>Mature_303_residues
ANPAYVAVDWGTSSFRLWLIGRDGSVLAERRSGEGMTSAAKTGFSQVLAGHLAAVEAPENLPVIICGMAGARQGWVEAGY
IDVPAPLAAILTAAVSVPGESRDIRILPGLAQRDMATPDVMRGEETQLLGALGNASAGAQAVCMPGTHSKWVHVGDGKVT
GFSTFMTGELFDVISKHTILSHAVAGAQEQPADAAAFEAAVSAAFARPALASNLLFTARSGQLLHGISAASAQARLSGTL
IGLEIAGALQDAANSGITLVASGRLQALYEQAFKTLSLPFTAIDADAAVRRGLSAAAEAIWPN

Specific function: D-galactonate degradation; second step. [C]

COG id: COG3734

COG function: function code G; 2-keto-3-deoxy-galactonokinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790128, Length=298, Percent_Identity=36.241610738255, Blast_Score=145, Evalue=5e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007729 [H]

Pfam domain/function: PF05035 DGOK [H]

EC number: =2.7.1.58 [H]

Molecular weight: Translated: 31173; Mature: 31042

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANPAYVAVDWGTSSFRLWLIGRDGSVLAERRSGEGMTSAAKTGFSQVLAGHLAAVEAPE
CCCCEEEEEEECCCCEEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
NLPVIICGMAGARQGWVEAGYIDVPAPLAAILTAAVSVPGESRDIRILPGLAQRDMATPD
CCCEEEEECCCCCCCCEECCEEECCHHHHHHHHHHHCCCCCCCCEEEECCCHHCCCCCCH
VMRGEETQLLGALGNASAGAQAVCMPGTHSKWVHVGDGKVTGFSTFMTGELFDVISKHTI
HHCCCHHHHHHHCCCCCCCCEEEEECCCCCCEEECCCCCEEEEHHHHHHHHHHHHHHHHH
LSHAVAGAQEQPADAAAFEAAVSAAFARPALASNLLFTARSGQLLHGISAASAQARLSGT
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEECCCCEEECCHHHHHHHHHCEE
LIGLEIAGALQDAANSGITLVASGRLQALYEQAFKTLSLPFTAIDADAAVRRGLSAAAEA
EEEEEEHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHH
IWPN
CCCC
>Mature Secondary Structure 
ANPAYVAVDWGTSSFRLWLIGRDGSVLAERRSGEGMTSAAKTGFSQVLAGHLAAVEAPE
CCCEEEEEEECCCCEEEEEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
NLPVIICGMAGARQGWVEAGYIDVPAPLAAILTAAVSVPGESRDIRILPGLAQRDMATPD
CCCEEEEECCCCCCCCEECCEEECCHHHHHHHHHHHCCCCCCCCEEEECCCHHCCCCCCH
VMRGEETQLLGALGNASAGAQAVCMPGTHSKWVHVGDGKVTGFSTFMTGELFDVISKHTI
HHCCCHHHHHHHCCCCCCCCEEEEECCCCCCEEECCCCCEEEEHHHHHHHHHHHHHHHHH
LSHAVAGAQEQPADAAAFEAAVSAAFARPALASNLLFTARSGQLLHGISAASAQARLSGT
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEECCCCEEECCHHHHHHHHHCEE
LIGLEIAGALQDAANSGITLVASGRLQALYEQAFKTLSLPFTAIDADAAVRRGLSAAAEA
EEEEEEHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHH
IWPN
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]