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The map label for this gene is dgoA [H]

Identifier: 209548107

GI number: 209548107

Start: 515619

End: 516260

Strand: Reverse

Name: dgoA [H]

Synonym: Rleg2_0501

Alternate gene names: 209548107

Gene position: 516260-515619 (Counterclockwise)

Preceding gene: 209548108

Following gene: 209548106

Centisome position: 11.38

GC content: 65.58

Gene sequence:

>642_bases
ATGAACCGTATCCCCTTCCCCGACATGAAGCGCCCGCTGATCGCCATCCTTCGCGGCATCCGGCCCGACGAGACCGAAAG
CGTGGTCGGTGCCCTGATCGACAATGGCCTGACGGCGATCGAGATCCCGCTCAATTCGCCGGAGCCGTTCAAATCGATCG
AGATCGCCGCCAAGATGGCGCCGCCCGAGGTGCTGATCGGCGCCGGCACGGTGCTGACGGTCGAGGCGGTCGACAGCCTG
AATGCCGCCGGCGGCACGCTGCTCGTCACGCCGAATGTCGAGCCCGAGGTGATCATCCGGGCGCGCCAATACGGCATGGT
GACGATGCCGGGTGTCTTTACCCCGACAGAGGCGCTCGCCGCGGCGCGGGCCGGCGCCACCGGTCTCAAATTCTTTCCGG
CCAGCGTGCTCGGTCCCTCCGGCATCACGGCGATCCGGGCGATCCTGCCGCCGGAACTGACGATAGCCGCCGTCGGCGGC
GTGTCGGACAAGAATTTCGGCGATTATACCAAGGCCGGCATCTTCGCCTTCGGCCTCGGCACCAGCCTTTACAAGCCGGG
AATGACCGCATCAGAGGTTGCCGAGCGCGCCAAGGCGACCATTTACGCCTATGATGCAGCCATTGGGAGCGTGAGCGTAT
GA

Upstream 100 bases:

>100_bases
CTCTCCCTTCCCTTCACCGCCATCGATGCGGACGCCGCCGTGCGCCGCGGGCTTTCGGCCGCCGCCGAAGCCATCTGGCC
GAATTGAGAAAGCCGACACG

Downstream 100 bases:

>100_bases
CCGATATCTACGAGTTCGAGGGCAAGACCCTTTGCAACACCAATTCCGTTCTCGGCGAAGGTCCGACCTATGATCCGGAC
AGGAATACCGTCTGGTGGTT

Product: 2-dehydro-3-deoxy-6-phosphogalactonate aldolase

Products: NA

Alternate protein names: 2-oxo-3-deoxygalactonate 6-phosphate aldolase; 6-phospho-2-dehydro-3-deoxygalactonate aldolase [H]

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MNRIPFPDMKRPLIAILRGIRPDETESVVGALIDNGLTAIEIPLNSPEPFKSIEIAAKMAPPEVLIGAGTVLTVEAVDSL
NAAGGTLLVTPNVEPEVIIRARQYGMVTMPGVFTPTEALAAARAGATGLKFFPASVLGPSGITAIRAILPPELTIAAVGG
VSDKNFGDYTKAGIFAFGLGTSLYKPGMTASEVAERAKATIYAYDAAIGSVSV

Sequences:

>Translated_213_residues
MNRIPFPDMKRPLIAILRGIRPDETESVVGALIDNGLTAIEIPLNSPEPFKSIEIAAKMAPPEVLIGAGTVLTVEAVDSL
NAAGGTLLVTPNVEPEVIIRARQYGMVTMPGVFTPTEALAAARAGATGLKFFPASVLGPSGITAIRAILPPELTIAAVGG
VSDKNFGDYTKAGIFAFGLGTSLYKPGMTASEVAERAKATIYAYDAAIGSVSV
>Mature_213_residues
MNRIPFPDMKRPLIAILRGIRPDETESVVGALIDNGLTAIEIPLNSPEPFKSIEIAAKMAPPEVLIGAGTVLTVEAVDSL
NAAGGTLLVTPNVEPEVIIRARQYGMVTMPGVFTPTEALAAARAGATGLKFFPASVLGPSGITAIRAILPPELTIAAVGG
VSDKNFGDYTKAGIFAFGLGTSLYKPGMTASEVAERAKATIYAYDAAIGSVSV

Specific function: D-galactonate degradation; first step. D-galactonate degradation; third step. [C]

COG id: COG0800

COG function: function code G; 2-keto-3-deoxy-6-phosphogluconate aldolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI48994954, Length=199, Percent_Identity=48.7437185929648, Blast_Score=179, Evalue=1e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000887
- InterPro:   IPR013785 [H]

Pfam domain/function: PF01081 Aldolase [H]

EC number: =4.1.2.21 [H]

Molecular weight: Translated: 22011; Mature: 22011

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: PS00160 ALDOLASE_KDPG_KHG_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRIPFPDMKRPLIAILRGIRPDETESVVGALIDNGLTAIEIPLNSPEPFKSIEIAAKMA
CCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCHHEEEEECCC
PPEVLIGAGTVLTVEAVDSLNAAGGTLLVTPNVEPEVIIRARQYGMVTMPGVFTPTEALA
CCEEEEECCCEEEEEEHHCCCCCCCEEEECCCCCCCEEEEEHHCCEEECCCCCCCHHHHH
AARAGATGLKFFPASVLGPSGITAIRAILPPELTIAAVGGVSDKNFGDYTKAGIFAFGLG
HHHCCCCCCEECCHHHCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHCEEEEECC
TSLYKPGMTASEVAERAKATIYAYDAAIGSVSV
HHHCCCCCCHHHHHHHHHEEEEEEECCCCCCCC
>Mature Secondary Structure
MNRIPFPDMKRPLIAILRGIRPDETESVVGALIDNGLTAIEIPLNSPEPFKSIEIAAKMA
CCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCHHEEEEECCC
PPEVLIGAGTVLTVEAVDSLNAAGGTLLVTPNVEPEVIIRARQYGMVTMPGVFTPTEALA
CCEEEEECCCEEEEEEHHCCCCCCCEEEECCCCCCCEEEEEHHCCEEECCCCCCCHHHHH
AARAGATGLKFFPASVLGPSGITAIRAILPPELTIAAVGGVSDKNFGDYTKAGIFAFGLG
HHHCCCCCCEECCHHHCCCCCHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHCEEEEECC
TSLYKPGMTASEVAERAKATIYAYDAAIGSVSV
HHHCCCCCCHHHHHHHHHEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]