| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is suhB [H]
Identifier: 209548092
GI number: 209548092
Start: 499567
End: 500376
Strand: Direct
Name: suhB [H]
Synonym: Rleg2_0486
Alternate gene names: 209548092
Gene position: 499567-500376 (Clockwise)
Preceding gene: 209548091
Following gene: 209548093
Centisome position: 11.01
GC content: 64.57
Gene sequence:
>810_bases ATGAGCGATAGGGAAAAGGCCCGCTGGCAGAACGATCTCACGCTGATCGTCGATGCTGCGAAAGAGGCCGGTGCGGTCGC TTTCGGTTTCTTCAACCAGTCTCCCGAGGTCTGGTGGAAAAACGACGACCGCTCCCCCGTCAGCGCCGCCGATTTCGCCG CCAACAAAACGCTCGAGACCATTCTGCGCAAGGCGCGGCCAGACTATGGCTGGCTGTCTGAGGAAACCGACGATGATGCC GACCGCCTCGCGCATGAGACGCTGTTCATCATCGACCCGATCGACGGCACGCGCGCCTTTCTCGGCGGGCAGAAGCTCTG GTGCGTCAGCGTCGCGGTCGTTCATCGCGGCCGGCCGGTCGCCGGCGTGCTCTATGCCCCGGCGCTCGAGGAACTCTATG AGGCCGTCGACGGCGGCGTGGCGCTGAAGAACGGCGTGCCCTTCACCGTCTCAGCCGCGGGACCGCAGGAGACGAGCCGC CTTGCGGTCGGCGAGGACCTGTTGAAGACCTTTCCGCCGGAGTTTCGCGACCGGGTCAGCCGCCACAAACACATTCCCTC GCTTGCCTATCGCATCGCCATGGTGGCGGACGGTCGTCTCGAAGGCACCTTCGTCAAGAGCAATTCGCATGATTGGGATC TGGCCGCCGCCGATCTGATCCTTAGCTGCGCCGGCGGTGGCCTCGTCGATCTCGACGGCCGACCGATCGTCTACAATCGC GCCGACGTGACCCACAACGTCCTTTGCGCAGCACCGACGCCCCGCATCGGCGAGTTTCTCGCGGCCTTTGCGGGACGACG AGACAGTTGA
Upstream 100 bases:
>100_bases GAAGGCATGACGCTGGCAGGGCGCTAGAGCATGATGCCGAAAAGTGTGTGCGGTTTTCGGACGACATCATGCTCAAACGA AAGTTGGACGGATTGATGCG
Downstream 100 bases:
>100_bases CGTTTCCGTCAAAATCCCGCAGATGGGGTGGCGGAGGAGAATAGCAGAAAGAGAACAAGAAATGACTGACTCCGGTGACA AGAAGCAGCTTTTGCATCTC
Product: inositol monophosphatase
Products: NA
Alternate protein names: I-1-Pase; IMPase; Inositol-1-phosphatase [H]
Number of amino acids: Translated: 269; Mature: 268
Protein sequence:
>269_residues MSDREKARWQNDLTLIVDAAKEAGAVAFGFFNQSPEVWWKNDDRSPVSAADFAANKTLETILRKARPDYGWLSEETDDDA DRLAHETLFIIDPIDGTRAFLGGQKLWCVSVAVVHRGRPVAGVLYAPALEELYEAVDGGVALKNGVPFTVSAAGPQETSR LAVGEDLLKTFPPEFRDRVSRHKHIPSLAYRIAMVADGRLEGTFVKSNSHDWDLAAADLILSCAGGGLVDLDGRPIVYNR ADVTHNVLCAAPTPRIGEFLAAFAGRRDS
Sequences:
>Translated_269_residues MSDREKARWQNDLTLIVDAAKEAGAVAFGFFNQSPEVWWKNDDRSPVSAADFAANKTLETILRKARPDYGWLSEETDDDA DRLAHETLFIIDPIDGTRAFLGGQKLWCVSVAVVHRGRPVAGVLYAPALEELYEAVDGGVALKNGVPFTVSAAGPQETSR LAVGEDLLKTFPPEFRDRVSRHKHIPSLAYRIAMVADGRLEGTFVKSNSHDWDLAAADLILSCAGGGLVDLDGRPIVYNR ADVTHNVLCAAPTPRIGEFLAAFAGRRDS >Mature_268_residues SDREKARWQNDLTLIVDAAKEAGAVAFGFFNQSPEVWWKNDDRSPVSAADFAANKTLETILRKARPDYGWLSEETDDDAD RLAHETLFIIDPIDGTRAFLGGQKLWCVSVAVVHRGRPVAGVLYAPALEELYEAVDGGVALKNGVPFTVSAAGPQETSRL AVGEDLLKTFPPEFRDRVSRHKHIPSLAYRIAMVADGRLEGTFVKSNSHDWDLAAADLILSCAGGGLVDLDGRPIVYNRA DVTHNVLCAAPTPRIGEFLAAFAGRRDS
Specific function: Unknown
COG id: COG0483
COG function: function code G; Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI5031789, Length=242, Percent_Identity=27.2727272727273, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI221625487, Length=242, Percent_Identity=27.2727272727273, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI7657236, Length=242, Percent_Identity=26.8595041322314, Blast_Score=65, Evalue=6e-11, Organism=Escherichia coli, GI1788882, Length=231, Percent_Identity=28.5714285714286, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1790659, Length=97, Percent_Identity=37.1134020618557, Blast_Score=70, Evalue=1e-13, Organism=Caenorhabditis elegans, GI193202570, Length=267, Percent_Identity=29.9625468164794, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI193202572, Length=262, Percent_Identity=29.3893129770992, Blast_Score=76, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6320493, Length=199, Percent_Identity=28.1407035175879, Blast_Score=69, Evalue=7e-13, Organism=Drosophila melanogaster, GI21357329, Length=264, Percent_Identity=26.1363636363636, Blast_Score=75, Evalue=6e-14, Organism=Drosophila melanogaster, GI21357303, Length=228, Percent_Identity=27.1929824561404, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24664918, Length=262, Percent_Identity=28.2442748091603, Blast_Score=69, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 - InterPro: IPR022337 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.25 [H]
Molecular weight: Translated: 29332; Mature: 29201
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: PS00630 IMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDREKARWQNDLTLIVDAAKEAGAVAFGFFNQSPEVWWKNDDRSPVSAADFAANKTLET CCCHHHHHHCCCEEEEEECCCCCCEEEEEEECCCCCEEECCCCCCCCCHHHHHHHHHHHH ILRKARPDYGWLSEETDDDADRLAHETLFIIDPIDGTRAFLGGQKLWCVSVAVVHRGRPV HHHHCCCCCCCCCCCCCCHHHHHHHCEEEEEECCCCCHHHHCCCEEHEEEEEHHHCCCCC AGVLYAPALEELYEAVDGGVALKNGVPFTVSAAGPQETSRLAVGEDLLKTFPPEFRDRVS EEHHHHHHHHHHHHHHCCCEEEECCCCEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHH RHKHIPSLAYRIAMVADGRLEGTFVKSNSHDWDLAAADLILSCAGGGLVDLDGRPIVYNR HHHCCHHHHHEEHEEECCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEECCCCEEEEEC ADVTHNVLCAAPTPRIGEFLAAFAGRRDS CCCCCCEEECCCCCHHHHHHHHHCCCCCC >Mature Secondary Structure SDREKARWQNDLTLIVDAAKEAGAVAFGFFNQSPEVWWKNDDRSPVSAADFAANKTLET CCHHHHHHCCCEEEEEECCCCCCEEEEEEECCCCCEEECCCCCCCCCHHHHHHHHHHHH ILRKARPDYGWLSEETDDDADRLAHETLFIIDPIDGTRAFLGGQKLWCVSVAVVHRGRPV HHHHCCCCCCCCCCCCCCHHHHHHHCEEEEEECCCCCHHHHCCCEEHEEEEEHHHCCCCC AGVLYAPALEELYEAVDGGVALKNGVPFTVSAAGPQETSRLAVGEDLLKTFPPEFRDRVS EEHHHHHHHHHHHHHHCCCEEEECCCCEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHH RHKHIPSLAYRIAMVADGRLEGTFVKSNSHDWDLAAADLILSCAGGGLVDLDGRPIVYNR HHHCCHHHHHEEHEEECCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEECCCCEEEEEC ADVTHNVLCAAPTPRIGEFLAAFAGRRDS CCCCCCEEECCCCCHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11214968 [H]