| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is 209548066
Identifier: 209548066
GI number: 209548066
Start: 469843
End: 470547
Strand: Reverse
Name: 209548066
Synonym: Rleg2_0459
Alternate gene names: NA
Gene position: 470547-469843 (Counterclockwise)
Preceding gene: 209548068
Following gene: 209548063
Centisome position: 10.37
GC content: 61.28
Gene sequence:
>705_bases ATGACGACGCGACCACTGACCACGATCGGCTTCGATGCCGACGACACACTCTGGCAGAACGAACAATATTACCGGCTGAC GGAAGCGCATTTCACCGGGCTTCTTGCCGATTTCGCCGAAGGACCGAAGATTTCCGAGCGGCTGCTGGAGGCCGAGAAGC GCAACCTTCGCCATTACGGCTTCGGCATCAAGGGCTTTACGCTGTCGATGATCGAAACGGCGATCGAGATCACCGAAGGC AAGGTTCCCGCAGGCGTGATCGCCAAGATCCTCGATACCGGCCGCGATCTTCTTTCCCATCCGGTCGAGACCATGCCGCA TGTGCGCGACACGCTGGAAGCGCTTTCCGGCAAATATCTGCTTGTGATGATCACCAAGGGCGACCTGTTCGACCAGGAGC GCAAGCTCGCCCAGTCCGGGCTCGGCGATTTCTTCGATGCCGTCGAAATCGTCTCCGACAAGACCGCCGTCACCTATCGC CGCATCTTCGCCAAGGTCGGCGATGGGCCGGAGCGGGCGATGATGGTCGGCAATTCGCTGAAATCGGACATCGTGCCGGC GATCGCCGCCGGCAGCTACGGCGTCTTCGTGCCGCACGAACTCACCTGGGTGCTGGAACATGTGGACGAACCGACGGAGG CGCCGCGCTTCCGCAAGATCGGCCATCTCGGCGAATTGCGCGACCTGATCGACCGGCTGGCTTGA
Upstream 100 bases:
>100_bases TCGGTCTAAAATCTGAATCCTGTTCTCAATTTTAGAGTTAGAACATGATGTTGTTCGAAAACCGCTCACACTTTTCGGCA TCATGCTCAAAGGTACGCAT
Downstream 100 bases:
>100_bases GGCAGGACGCCCGCCTTATTGCTGTTTGGCGGGCGCCTTGGGAAAGAGCGACGGCCGTTCCGGCTCGGCCGGCGGCTGCG GCTGTTTCGGGGCAGCCGCC
Product: haloacid dehalogenase
Products: NA
Alternate protein names: Haloacid Dehalogenase Domain Protein Hydrolase; HAD Superfamily Hydrolase; Haloacid Dehalogenase-Like Hydrolase; Haloacid Dehalogenase Domain-Containing Protein Hydrolase; Hydrolase Haloacid Dehalogenase Family; Haloacid Dehydrogenase Hydrolase; Hydrolase Family Protein; Halogenase-Like Hydrolase; Haloacid Dehalogenase-Like Family Protein; Hydrolase Haloacid Dehalogenase-Like Family; Haloacid Dehalogenase Family Hydrolase; Hydrolase Haloacid Dehalogenase Family Protein; HAD Family Phosphatase; Hydrolase Of HAD Superfamily
Number of amino acids: Translated: 234; Mature: 233
Protein sequence:
>234_residues MTTRPLTTIGFDADDTLWQNEQYYRLTEAHFTGLLADFAEGPKISERLLEAEKRNLRHYGFGIKGFTLSMIETAIEITEG KVPAGVIAKILDTGRDLLSHPVETMPHVRDTLEALSGKYLLVMITKGDLFDQERKLAQSGLGDFFDAVEIVSDKTAVTYR RIFAKVGDGPERAMMVGNSLKSDIVPAIAAGSYGVFVPHELTWVLEHVDEPTEAPRFRKIGHLGELRDLIDRLA
Sequences:
>Translated_234_residues MTTRPLTTIGFDADDTLWQNEQYYRLTEAHFTGLLADFAEGPKISERLLEAEKRNLRHYGFGIKGFTLSMIETAIEITEG KVPAGVIAKILDTGRDLLSHPVETMPHVRDTLEALSGKYLLVMITKGDLFDQERKLAQSGLGDFFDAVEIVSDKTAVTYR RIFAKVGDGPERAMMVGNSLKSDIVPAIAAGSYGVFVPHELTWVLEHVDEPTEAPRFRKIGHLGELRDLIDRLA >Mature_233_residues TTRPLTTIGFDADDTLWQNEQYYRLTEAHFTGLLADFAEGPKISERLLEAEKRNLRHYGFGIKGFTLSMIETAIEITEGK VPAGVIAKILDTGRDLLSHPVETMPHVRDTLEALSGKYLLVMITKGDLFDQERKLAQSGLGDFFDAVEIVSDKTAVTYRR IFAKVGDGPERAMMVGNSLKSDIVPAIAAGSYGVFVPHELTWVLEHVDEPTEAPRFRKIGHLGELRDLIDRLA
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26074; Mature: 25943
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTRPLTTIGFDADDTLWQNEQYYRLTEAHFTGLLADFAEGPKISERLLEAEKRNLRHYG CCCCCCEEECCCCCCCHHCCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC FGIKGFTLSMIETAIEITEGKVPAGVIAKILDTGRDLLSHPVETMPHVRDTLEALSGKYL CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEE LVMITKGDLFDQERKLAQSGLGDFFDAVEIVSDKTAVTYRRIFAKVGDGPERAMMVGNSL EEEEECCCHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHCCHH KSDIVPAIAAGSYGVFVPHELTWVLEHVDEPTEAPRFRKIGHLGELRDLIDRLA HHHHHHHHHCCCCCEECCHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHC >Mature Secondary Structure TTRPLTTIGFDADDTLWQNEQYYRLTEAHFTGLLADFAEGPKISERLLEAEKRNLRHYG CCCCCEEECCCCCCCHHCCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC FGIKGFTLSMIETAIEITEGKVPAGVIAKILDTGRDLLSHPVETMPHVRDTLEALSGKYL CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEE LVMITKGDLFDQERKLAQSGLGDFFDAVEIVSDKTAVTYRRIFAKVGDGPERAMMVGNSL EEEEECCCHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHCCHH KSDIVPAIAAGSYGVFVPHELTWVLEHVDEPTEAPRFRKIGHLGELRDLIDRLA HHHHHHHHHCCCCCEECCHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA