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The map label for this gene is erfK [H]

Identifier: 209548063

GI number: 209548063

Start: 467679

End: 468428

Strand: Reverse

Name: erfK [H]

Synonym: Rleg2_0456

Alternate gene names: 209548063

Gene position: 468428-467679 (Counterclockwise)

Preceding gene: 209548066

Following gene: 209548062

Centisome position: 10.32

GC content: 65.73

Gene sequence:

>750_bases
ATGATGAAACAGCTTGTTCTTGCCGCAGCCCTGTTCGGCATATGCTCCACGGCCGCCCTTGCAGACGACCGCTACGCCAC
CCGTCCGCCCGTCGTGCTCAGCCCCGATCTGACGGCGCCCTGGATCAACCAGCTCGGCGGCGGCACGGTTCGCCCCGTCG
TCTATCAGCGGCCGGTCGTCCAGTTGCAGCAGCGTGGGCTTTTCCAGCGCCGCGTCATCCGCCAGGCGCCGCAAGTCGCA
CCGCAGACCGTTTCGGCGATCAACCCGGGCATCCCTGCGATCCGTCATCCGATCGAGCCGCAATTCCTGCCGCAGATGGT
CGATTACGACACTGAGGAAAAACCCGGCACGATCGTCATCGATACCAACAACCGCTTCCTCTATCTGGTGATGGACGGCG
GAAAGGCGCGGCGCTACGGCGTCGGCGTCGGCAAGCCCGGCTTCGAATGGGCCGGCGCCCACAAGATCACCCGCAAACAG
GAATGGCCGGACTGGACGCCGCCTTCGGAAATGATCAGCCGCGAAGCCGCCAAGGGCCACTACCTGCCGGCGCGCATGGA
CGGCGGCGCGGAAAACCCGCTCGGCGCACGCGCCATGTATCTCGGCTCGACGCTTTACCGCATCCACGGCACCAACGCGC
CCTGGTCGATCGGCAGCGCCGTCTCCTCCGGTTGCATCCGCCTGCGCAACGAAGATGTCGTCGACCTCTATGACCGCGTC
CGCGTCGGAACCCGCGTCGTCGTCATGTAA

Upstream 100 bases:

>100_bases
CTGGCGGATTGGGTGGCAGCGTCTTTCCCGGGCGGGATATCTCCGCCTGGGCGGATGTCTCCGCCAGCGCATTTTCGGCC
ATTTGTAGAGAGTCCGTCCG

Downstream 100 bases:

>100_bases
CGACACATAAATTATCTTGGAAGCCGCAAGAACAGGCGGCTTCCCTCCCCGAAATTGCTTTATCCGGCCGGGCCGATCTT
GAATCGGGCAGAAGTTCATG

Product: ErfK/YbiS/YcfS/YnhG family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MMKQLVLAAALFGICSTAALADDRYATRPPVVLSPDLTAPWINQLGGGTVRPVVYQRPVVQLQQRGLFQRRVIRQAPQVA
PQTVSAINPGIPAIRHPIEPQFLPQMVDYDTEEKPGTIVIDTNNRFLYLVMDGGKARRYGVGVGKPGFEWAGAHKITRKQ
EWPDWTPPSEMISREAAKGHYLPARMDGGAENPLGARAMYLGSTLYRIHGTNAPWSIGSAVSSGCIRLRNEDVVDLYDRV
RVGTRVVVM

Sequences:

>Translated_249_residues
MMKQLVLAAALFGICSTAALADDRYATRPPVVLSPDLTAPWINQLGGGTVRPVVYQRPVVQLQQRGLFQRRVIRQAPQVA
PQTVSAINPGIPAIRHPIEPQFLPQMVDYDTEEKPGTIVIDTNNRFLYLVMDGGKARRYGVGVGKPGFEWAGAHKITRKQ
EWPDWTPPSEMISREAAKGHYLPARMDGGAENPLGARAMYLGSTLYRIHGTNAPWSIGSAVSSGCIRLRNEDVVDLYDRV
RVGTRVVVM
>Mature_249_residues
MMKQLVLAAALFGICSTAALADDRYATRPPVVLSPDLTAPWINQLGGGTVRPVVYQRPVVQLQQRGLFQRRVIRQAPQVA
PQTVSAINPGIPAIRHPIEPQFLPQMVDYDTEEKPGTIVIDTNNRFLYLVMDGGKARRYGVGVGKPGFEWAGAHKITRKQ
EWPDWTPPSEMISREAAKGHYLPARMDGGAENPLGARAMYLGSTLYRIHGTNAPWSIGSAVSSGCIRLRNEDVVDLYDRV
RVGTRVVVM

Specific function: Responsible, at least in part, for anchoring of the major outer membrane lipoprotein (Lpp, also known as the Braun lipoprotein) to the peptidoglycan via a meso-diaminopimelyl-L-Lys- bond on the terminal residue of Lpp [H]

COG id: COG1376

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family [H]

Homologues:

Organism=Escherichia coli, GI1788299, Length=149, Percent_Identity=41.6107382550336, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1787040, Length=110, Percent_Identity=46.3636363636364, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1787356, Length=138, Percent_Identity=36.9565217391304, Blast_Score=82, Evalue=2e-17,
Organism=Escherichia coli, GI1787968, Length=137, Percent_Identity=37.2262773722628, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005490 [H]

Pfam domain/function: PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 27471; Mature: 27471

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKQLVLAAALFGICSTAALADDRYATRPPVVLSPDLTAPWINQLGGGTVRPVVYQRPVV
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHCCCCCCCCHHHHCHHH
QLQQRGLFQRRVIRQAPQVAPQTVSAINPGIPAIRHPIEPQFLPQMVDYDTEEKPGTIVI
HHHHCCHHHHHHHHHCCCCCHHHHHHCCCCCHHHCCCCCHHHHHHHHCCCCCCCCCEEEE
DTNNRFLYLVMDGGKARRYGVGVGKPGFEWAGAHKITRKQEWPDWTPPSEMISREAAKGH
ECCCCEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
YLPARMDGGAENPLGARAMYLGSTLYRIHGTNAPWSIGSAVSSGCIRLRNEDVVDLYDRV
CCCCCCCCCCCCCCCHHHHHHCCEEEEEECCCCCCCHHHHHHHCEEEECCCCHHHHHHHH
RVGTRVVVM
HHCEEEEEC
>Mature Secondary Structure
MMKQLVLAAALFGICSTAALADDRYATRPPVVLSPDLTAPWINQLGGGTVRPVVYQRPVV
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHCCCCCCCCHHHHCHHH
QLQQRGLFQRRVIRQAPQVAPQTVSAINPGIPAIRHPIEPQFLPQMVDYDTEEKPGTIVI
HHHHCCHHHHHHHHHCCCCCHHHHHHCCCCCHHHCCCCCHHHHHHHHCCCCCCCCCEEEE
DTNNRFLYLVMDGGKARRYGVGVGKPGFEWAGAHKITRKQEWPDWTPPSEMISREAAKGH
ECCCCEEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
YLPARMDGGAENPLGARAMYLGSTLYRIHGTNAPWSIGSAVSSGCIRLRNEDVVDLYDRV
CCCCCCCCCCCCCCCHHHHHHCCEEEEEECCCCCCCHHHHHHHCEEEECCCCHHHHHHHH
RVGTRVVVM
HHCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7592411; 9097040; 9278503; 9298646 [H]