| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is rmlA1 [C]
Identifier: 209548017
GI number: 209548017
Start: 421186
End: 421899
Strand: Direct
Name: rmlA1 [C]
Synonym: Rleg2_0409
Alternate gene names: 209548017
Gene position: 421186-421899 (Clockwise)
Preceding gene: 209548016
Following gene: 209548018
Centisome position: 9.28
GC content: 54.62
Gene sequence:
>714_bases ATGTCTAGGCGAGCAGTCATTCTGGCAGGGGGAATGGGAACGCGGCTGCGCCCTTATACCGTCGTGCTTCCCAAGCCGCT GATGCCGATCGGCGATTATCCTATTCTCGAAGTCATCATTCGCCAGCTGATATCAGGCGGGTTTCAGCATATAACGCTTG CCGTCAATCATCAGGCTGAACTGATCAAAGCCTTTTTCCAGGATGGCGACAAATGGGGCGTGCGCATCGATTATTCGCTG GAGGATCAGCCGCTCGGCACTATGGGTCCGCTACGGTTGATCAAGGATCTGCCTGAGAATTTTCTGGTGATGAACGGAGA CATCCTGACGGACCTGAACTATGCCGATTTTCATGACACTCACGTCCGGGAGGGGAATATATTCACCATCTCGTCAAAGA CACGGGAGCATCGCATAGACTACGGCGTTCTGGACACCAACGAGGCAGGGCTGCTGACGGGGTTCCGGGAGAAGCCGACG GCCGAGTATAAAGTCAGCATGGGGGTCTACATGGTGTCTTCGGGGGCGGTCGAGCACATACCGCAACGTGGCGCCTACGG TTTTGACCAGCTGATGCTTGATCTTCTTGCAGCCGGAAAGCCGGCAACAGTGCGAGATTTTCCAGGCTATTGGCTCGATA TTGGACGGCCCGACGATTATGCACTGGCGATCGAGCAGTTCGAAACCATGCAATCCAGGTTCTTGAATGGTTGA
Upstream 100 bases:
>100_bases GGATTCTCGCCTCGCTACAGCTTGAAAGACGGGCTCCAGGCGACGATTGAATGGCTGCGTCAGCCCGAGAATCTGGCGCG GTATAAGGCGGATATTTTCA
Downstream 100 bases:
>100_bases TGCCATCGTCACCGGTGCTGGCGGCTTTCTCGGGAAGCGTCTGATTGAGCGGCTTAAACAGGCCGGCGTTGACGTGCTTG CGGTTGACCGAACGCATGGT
Product: nucleotidyl transferase
Products: NA
Alternate protein names: UDP-N-acetylglucosamine pyrophosphorylase; N-acetylglucosamine-1-phosphate uridyltransferase; Glucosamine-1-phosphate N-acetyltransferase [H]
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MSRRAVILAGGMGTRLRPYTVVLPKPLMPIGDYPILEVIIRQLISGGFQHITLAVNHQAELIKAFFQDGDKWGVRIDYSL EDQPLGTMGPLRLIKDLPENFLVMNGDILTDLNYADFHDTHVREGNIFTISSKTREHRIDYGVLDTNEAGLLTGFREKPT AEYKVSMGVYMVSSGAVEHIPQRGAYGFDQLMLDLLAAGKPATVRDFPGYWLDIGRPDDYALAIEQFETMQSRFLNG
Sequences:
>Translated_237_residues MSRRAVILAGGMGTRLRPYTVVLPKPLMPIGDYPILEVIIRQLISGGFQHITLAVNHQAELIKAFFQDGDKWGVRIDYSL EDQPLGTMGPLRLIKDLPENFLVMNGDILTDLNYADFHDTHVREGNIFTISSKTREHRIDYGVLDTNEAGLLTGFREKPT AEYKVSMGVYMVSSGAVEHIPQRGAYGFDQLMLDLLAAGKPATVRDFPGYWLDIGRPDDYALAIEQFETMQSRFLNG >Mature_236_residues SRRAVILAGGMGTRLRPYTVVLPKPLMPIGDYPILEVIIRQLISGGFQHITLAVNHQAELIKAFFQDGDKWGVRIDYSLE DQPLGTMGPLRLIKDLPENFLVMNGDILTDLNYADFHDTHVREGNIFTISSKTREHRIDYGVLDTNEAGLLTGFREKPTA EYKVSMGVYMVSSGAVEHIPQRGAYGFDQLMLDLLAAGKPATVRDFPGYWLDIGRPDDYALAIEQFETMQSRFLNG
Specific function: Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetyl-glucosamine (UDP- GlcNAc). Responsible for the acetylation of GlcN-1-P to GlcNAc-1- P, and for the uridyl transfer from UTP to GlcNAc-1-P, to produce UDP-GlcN
COG id: COG1208
COG function: function code MJ; Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Homo sapiens, GI11761621, Length=228, Percent_Identity=33.3333333333333, Blast_Score=120, Evalue=7e-28, Organism=Homo sapiens, GI11761619, Length=228, Percent_Identity=33.3333333333333, Blast_Score=120, Evalue=1e-27, Organism=Homo sapiens, GI31881779, Length=227, Percent_Identity=27.7533039647577, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI45447090, Length=227, Percent_Identity=27.7533039647577, Blast_Score=73, Evalue=2e-13, Organism=Escherichia coli, GI1788351, Length=244, Percent_Identity=24.1803278688525, Blast_Score=62, Evalue=3e-11, Organism=Caenorhabditis elegans, GI133931050, Length=235, Percent_Identity=33.6170212765957, Blast_Score=120, Evalue=5e-28, Organism=Caenorhabditis elegans, GI17509979, Length=194, Percent_Identity=30.4123711340206, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17509981, Length=179, Percent_Identity=28.4916201117318, Blast_Score=71, Evalue=4e-13, Organism=Saccharomyces cerevisiae, GI6320148, Length=229, Percent_Identity=32.7510917030568, Blast_Score=120, Evalue=3e-28, Organism=Drosophila melanogaster, GI21355443, Length=227, Percent_Identity=33.920704845815, Blast_Score=125, Evalue=2e-29, Organism=Drosophila melanogaster, GI24644084, Length=227, Percent_Identity=33.920704845815, Blast_Score=125, Evalue=2e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005835 - InterPro: IPR011004 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.23; =2.3.1.157 [H]
Molecular weight: Translated: 26579; Mature: 26448
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRRAVILAGGMGTRLRPYTVVLPKPLMPIGDYPILEVIIRQLISGGFQHITLAVNHQAE CCCCEEEEECCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCHHH LIKAFFQDGDKWGVRIDYSLEDQPLGTMGPLRLIKDLPENFLVMNGDILTDLNYADFHDT HHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCEEEECCCEEECCCCCCCCCC HVREGNIFTISSKTREHRIDYGVLDTNEAGLLTGFREKPTAEYKVSMGVYMVSSGAVEHI EECCCCEEEEECCCHHHCCCCCEECCCCCCEEECCCCCCCCEEEEEEEEEEECCCCHHHC PQRGAYGFDQLMLDLLAAGKPATVRDFPGYWLDIGRPDDYALAIEQFETMQSRFLNG CCCCCCCHHHHHHHHHHCCCCCEEECCCCCEEECCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SRRAVILAGGMGTRLRPYTVVLPKPLMPIGDYPILEVIIRQLISGGFQHITLAVNHQAE CCCEEEEECCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCHHH LIKAFFQDGDKWGVRIDYSLEDQPLGTMGPLRLIKDLPENFLVMNGDILTDLNYADFHDT HHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCEEEECCCEEECCCCCCCCCC HVREGNIFTISSKTREHRIDYGVLDTNEAGLLTGFREKPTAEYKVSMGVYMVSSGAVEHI EECCCCEEEEECCCHHHCCCCCEECCCCCCEEECCCCCCCCEEEEEEEEEEECCCCHHHC PQRGAYGFDQLMLDLLAAGKPATVRDFPGYWLDIGRPDDYALAIEQFETMQSRFLNG CCCCCCCHHHHHHHHHHCCCCCEEECCCCCEEECCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA