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The map label for this gene is 209548009

Identifier: 209548009

GI number: 209548009

Start: 413720

End: 414523

Strand: Direct

Name: 209548009

Synonym: Rleg2_0401

Alternate gene names: NA

Gene position: 413720-414523 (Clockwise)

Preceding gene: 209548008

Following gene: 209548011

Centisome position: 9.12

GC content: 65.05

Gene sequence:

>804_bases
ATGAACACGAAGCAAATCATTCCCTCCGACGAGGATCTGACCGCCTTCATCGATGGCGAACTGACGGCCGAAGAGGCCGC
GCGCATCGAAAGTCTGGTGAACGAAGACGAGAGCGTCGCCGAGCGGCTGGAATTCCTGGCCCGCGCCAGCCTGCCCTTCG
AGCCGGCCTTTGCGCCGCTGCTGTCGCAGGCTCCACGCGAGAAACTGCAAACGATGCTCGCCGCCATCCCCGTGCCTGAG
AGCGCTAAACCCGGCGCCACGCCTGTATTCGCCAGCCGCCGCCGCTTCCTCGGCGCGCTTGCCGCCTCGCTTGTCGCCGG
CGTCGCGATCGACCGCGCTGTCCTCAGCATCGGCAGAGGCTTTTCGGCGAAGGACGAAAACAGCGAATGGCGCGCCGTGG
TCGCCGACTATATCTCGCTCTATACGCCGGAGACTCTCGCCGGCCCCGTGCCCGAGAGAGACGTCCAGGCCGCCCAGCTC
GCAGGCCTCGACGAAAAGCTCGGCCTATCGCTCTCCCCCGAATCCGTTTCGCTGCCGGGCATCGATTTCAAACGCGCTCT
GCTCTTGCAATATGACGGCAAACCGCTCGCTCAGATCGCCTATCTCGACCCGGAAAGCGGCCCGATGGCGCTCTGCATCG
TCCGCTCCGATGCCGGCCGCAAGGCGCCGGATCTCGAAAGTCGTAAGGGCATGAACGTCGTCTACTGGTCGAACGGCACG
CACGCCTTCATGCTGATCGGCCATGCCGAGGCGGACAGGATGACGGCGATTGCCGATGAGGTGTGGGGGAGGGTGGCGGC
CTGA

Upstream 100 bases:

>100_bases
AGGTGGCAAGCATATTGGATATTCCGATCGGAACCGTGATGAGCCGGCTGGCGGCTGCCCGCGCCAGGCTCTCCGGCGAT
GGCCTGGAAGGGGGACGGCA

Downstream 100 bases:

>100_bases
CCCGCTATTGGCCCGAGCGAGATCGGACGTGATAAACCTGCTATCGATTTCGTTTCACGAACTGACCAAGACGGTTCACA
AGCTTCGATGCCCAGAACAT

Product: transmembrane anti-sigma factor

Products: NA

Alternate protein names: Transmembrane Transcriptional Regulator

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MNTKQIIPSDEDLTAFIDGELTAEEAARIESLVNEDESVAERLEFLARASLPFEPAFAPLLSQAPREKLQTMLAAIPVPE
SAKPGATPVFASRRRFLGALAASLVAGVAIDRAVLSIGRGFSAKDENSEWRAVVADYISLYTPETLAGPVPERDVQAAQL
AGLDEKLGLSLSPESVSLPGIDFKRALLLQYDGKPLAQIAYLDPESGPMALCIVRSDAGRKAPDLESRKGMNVVYWSNGT
HAFMLIGHAEADRMTAIADEVWGRVAA

Sequences:

>Translated_267_residues
MNTKQIIPSDEDLTAFIDGELTAEEAARIESLVNEDESVAERLEFLARASLPFEPAFAPLLSQAPREKLQTMLAAIPVPE
SAKPGATPVFASRRRFLGALAASLVAGVAIDRAVLSIGRGFSAKDENSEWRAVVADYISLYTPETLAGPVPERDVQAAQL
AGLDEKLGLSLSPESVSLPGIDFKRALLLQYDGKPLAQIAYLDPESGPMALCIVRSDAGRKAPDLESRKGMNVVYWSNGT
HAFMLIGHAEADRMTAIADEVWGRVAA
>Mature_267_residues
MNTKQIIPSDEDLTAFIDGELTAEEAARIESLVNEDESVAERLEFLARASLPFEPAFAPLLSQAPREKLQTMLAAIPVPE
SAKPGATPVFASRRRFLGALAASLVAGVAIDRAVLSIGRGFSAKDENSEWRAVVADYISLYTPETLAGPVPERDVQAAQL
AGLDEKLGLSLSPESVSLPGIDFKRALLLQYDGKPLAQIAYLDPESGPMALCIVRSDAGRKAPDLESRKGMNVVYWSNGT
HAFMLIGHAEADRMTAIADEVWGRVAA

Specific function: Unknown

COG id: COG5662

COG function: function code K; Predicted transmembrane transcriptional regulator (anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28675; Mature: 28675

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTKQIIPSDEDLTAFIDGELTAEEAARIESLVNEDESVAERLEFLARASLPFEPAFAPL
CCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHH
LSQAPREKLQTMLAAIPVPESAKPGATPVFASRRRFLGALAASLVAGVAIDRAVLSIGRG
HHHCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
FSAKDENSEWRAVVADYISLYTPETLAGPVPERDVQAAQLAGLDEKLGLSLSPESVSLPG
CCCCCCCCHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHCCCHHHCCCEECCCCCCCCC
IDFKRALLLQYDGKPLAQIAYLDPESGPMALCIVRSDAGRKAPDLESRKGMNVVYWSNGT
CCHHHEEEEEECCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCHHCCCCEEEEECCCC
HAFMLIGHAEADRMTAIADEVWGRVAA
EEEEEEECCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNTKQIIPSDEDLTAFIDGELTAEEAARIESLVNEDESVAERLEFLARASLPFEPAFAPL
CCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHH
LSQAPREKLQTMLAAIPVPESAKPGATPVFASRRRFLGALAASLVAGVAIDRAVLSIGRG
HHHCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
FSAKDENSEWRAVVADYISLYTPETLAGPVPERDVQAAQLAGLDEKLGLSLSPESVSLPG
CCCCCCCCHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHCCCHHHCCCEECCCCCCCCC
IDFKRALLLQYDGKPLAQIAYLDPESGPMALCIVRSDAGRKAPDLESRKGMNVVYWSNGT
CCHHHEEEEEECCCCEEEEEEECCCCCCEEEEEEECCCCCCCCCCHHCCCCEEEEECCCC
HAFMLIGHAEADRMTAIADEVWGRVAA
EEEEEEECCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA