| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is ydjH [C]
Identifier: 209547876
GI number: 209547876
Start: 272390
End: 273442
Strand: Direct
Name: ydjH [C]
Synonym: Rleg2_0268
Alternate gene names: 209547876
Gene position: 272390-273442 (Clockwise)
Preceding gene: 209547875
Following gene: 209547877
Centisome position: 6.0
GC content: 65.81
Gene sequence:
>1053_bases ATGCGAACCGGGGAGGAGGTTGACCATCGCGGCGCTCTGAAACAGGGCGGCATCGTTTGCGCCGGCAATTTCATTGTCGA CCGTGTCCACACCCTGTCCTATTGGCCCGAGCAGGGTAATCTCGCCCATATCCTGCACCAGGATCTGGGCGTGGGGGGCG GGGCCGCCAATGTCGTCACCGATCTCGCCTCGCTCGGATTTCCCGGAAGGCTGGCGGCGGCGGGGTGCATCGGCGCCGAT CAGGACGGAGAGATCGTCAAGGCCCGGCTTGCGGCGGCGGGCGTCGATACCGGTGGTCTCACCGCGCTCGCCGACCGGAT GACGGCGCATACGCATGTCATGAACGTGCCCGGCCAGAACCGGACCTTCTTCTATCATGGCGGCGCCAGCGATGCCGTCA CGGACAAGCTCATCTCACCCGCGACCTTCGCCGAGGCCGGATATCGGCTGTTCTATCTCGGCTATCTCATGCTGTTGCCG GGCCTCGACCGAATAGGGGCCGACGGTTCGTCGGGAGCCTCGCGCCTGCTAGAAGCCGCGCGCCGCGCCGGGCTGACGAC CTGCGTGGATTTCGTCTCCAGCGAAGACCCGGAATTTGCGGCCAAAGTCGGCGTCGCTCTGCCCTTCTGCGATTTCCTGA TCATCAACGAGATGGAGGCGGGCCGGGCAACCGGCGTTGTCGTTCGCGATGCGAAGGGAGATCTGATCGAGGCGGAGCTT TTGAAGGCCGGCGAGCGGCTGCTGGCCGCAGGCGTCGCCAAGGGGGCGATCATCCACGCGCCGGAGATCTGCTTCTGGTT TGCATCAGGCGCCGCCCCGATCATGACGCGTTCGCGCCCCGTCGATCCCAATGACATCGTCAGCACTGTCGGCGCCGGCG ACGCCTTCTGTGCCGCCGTGCTCTACGGCCTGCACGAGAACTGGCCGGTCGAGCAGATCTGCACTGTGGCCCATGCCGCA GCTGCGTATTGCCTGACGGGCGCGACGGCCACCGACGGCATCCCCGACATGTCTATCCTCTTCCGGGAGGCGAAGGACAC GAACCCCACCTAG
Upstream 100 bases:
>100_bases TATGACGGGGCGTCCGTCTGATGGAGCCGCTCGGCCGCTTTGCCGCAATCGACGAAGACGAGCCGCCGTTCCGGCCCTTG CGGAACGAAGGAGGCCGCTG
Downstream 100 bases:
>100_bases CCGATGCCAGGCAGTCAAAAAGGGAGGAGCACATGAATCTATTCACCATGGCAGCCGCGCACGGCCGCTCTGCCGGTGCA GATGCGGCCGGGGAGGCAGC
Product: PfkB domain-containing protein
Products: NA
Alternate protein names: PfkB Domain Protein; Sugar Kinase; PfkB Domain-Containing Protein; Kinase; Ribokinase Family Sugar Kinase; Myo-Inositol Catabolism; Ribokinase-Like Protein; PfkB Family Carbohydrate Kinase; PfkB Family Sugar Kinase; Kinase PfkB Family
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MRTGEEVDHRGALKQGGIVCAGNFIVDRVHTLSYWPEQGNLAHILHQDLGVGGGAANVVTDLASLGFPGRLAAAGCIGAD QDGEIVKARLAAAGVDTGGLTALADRMTAHTHVMNVPGQNRTFFYHGGASDAVTDKLISPATFAEAGYRLFYLGYLMLLP GLDRIGADGSSGASRLLEAARRAGLTTCVDFVSSEDPEFAAKVGVALPFCDFLIINEMEAGRATGVVVRDAKGDLIEAEL LKAGERLLAAGVAKGAIIHAPEICFWFASGAAPIMTRSRPVDPNDIVSTVGAGDAFCAAVLYGLHENWPVEQICTVAHAA AAYCLTGATATDGIPDMSILFREAKDTNPT
Sequences:
>Translated_350_residues MRTGEEVDHRGALKQGGIVCAGNFIVDRVHTLSYWPEQGNLAHILHQDLGVGGGAANVVTDLASLGFPGRLAAAGCIGAD QDGEIVKARLAAAGVDTGGLTALADRMTAHTHVMNVPGQNRTFFYHGGASDAVTDKLISPATFAEAGYRLFYLGYLMLLP GLDRIGADGSSGASRLLEAARRAGLTTCVDFVSSEDPEFAAKVGVALPFCDFLIINEMEAGRATGVVVRDAKGDLIEAEL LKAGERLLAAGVAKGAIIHAPEICFWFASGAAPIMTRSRPVDPNDIVSTVGAGDAFCAAVLYGLHENWPVEQICTVAHAA AAYCLTGATATDGIPDMSILFREAKDTNPT >Mature_350_residues MRTGEEVDHRGALKQGGIVCAGNFIVDRVHTLSYWPEQGNLAHILHQDLGVGGGAANVVTDLASLGFPGRLAAAGCIGAD QDGEIVKARLAAAGVDTGGLTALADRMTAHTHVMNVPGQNRTFFYHGGASDAVTDKLISPATFAEAGYRLFYLGYLMLLP GLDRIGADGSSGASRLLEAARRAGLTTCVDFVSSEDPEFAAKVGVALPFCDFLIINEMEAGRATGVVVRDAKGDLIEAEL LKAGERLLAAGVAKGAIIHAPEICFWFASGAAPIMTRSRPVDPNDIVSTVGAGDAFCAAVLYGLHENWPVEQICTVAHAA AAYCLTGATATDGIPDMSILFREAKDTNPT
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36468; Mature: 36468
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTGEEVDHRGALKQGGIVCAGNFIVDRVHTLSYWPEQGNLAHILHQDLGVGGGAANVVT CCCCCCCHHCCCHHHCCEEEECHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHH DLASLGFPGRLAAAGCIGADQDGEIVKARLAAAGVDTGGLTALADRMTAHTHVMNVPGQN HHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEEECCCCC RTFFYHGGASDAVTDKLISPATFAEAGYRLFYLGYLMLLPGLDRIGADGSSGASRLLEAA CEEEEECCCCHHHHHHHCCCHHHHHHCHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHH RRAGLTTCVDFVSSEDPEFAAKVGVALPFCDFLIINEMEAGRATGVVVRDAKGDLIEAEL HHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEECCCCCCHHHHH LKAGERLLAAGVAKGAIIHAPEICFWFASGAAPIMTRSRPVDPNDIVSTVGAGDAFCAAV HHHHHHHHHHHHHCCCEEECCCEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHH LYGLHENWPVEQICTVAHAAAAYCLTGATATDGIPDMSILFREAKDTNPT HHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCC >Mature Secondary Structure MRTGEEVDHRGALKQGGIVCAGNFIVDRVHTLSYWPEQGNLAHILHQDLGVGGGAANVVT CCCCCCCHHCCCHHHCCEEEECHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCHHHHHH DLASLGFPGRLAAAGCIGADQDGEIVKARLAAAGVDTGGLTALADRMTAHTHVMNVPGQN HHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHEEEECCCCC RTFFYHGGASDAVTDKLISPATFAEAGYRLFYLGYLMLLPGLDRIGADGSSGASRLLEAA CEEEEECCCCHHHHHHHCCCHHHHHHCHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHH RRAGLTTCVDFVSSEDPEFAAKVGVALPFCDFLIINEMEAGRATGVVVRDAKGDLIEAEL HHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEECCCCCCHHHHH LKAGERLLAAGVAKGAIIHAPEICFWFASGAAPIMTRSRPVDPNDIVSTVGAGDAFCAAV HHHHHHHHHHHHHCCCEEECCCEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHH LYGLHENWPVEQICTVAHAAAAYCLTGATATDGIPDMSILFREAKDTNPT HHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA