Click here to switch to the map view.

The map label for this gene is yurM [H]

Identifier: 209547865

GI number: 209547865

Start: 260627

End: 261463

Strand: Reverse

Name: yurM [H]

Synonym: Rleg2_0256

Alternate gene names: 209547865

Gene position: 261463-260627 (Counterclockwise)

Preceding gene: 209547866

Following gene: 209547864

Centisome position: 5.76

GC content: 60.81

Gene sequence:

>837_bases
ATGAAGACCCAGACCCCCTGGCTGCCCGTCGTGCTGTGGATCTTGATCAGCCTCGCGACGCTTTTCCCGATCTACTGGCT
GTTCGTCATATCGGTGAAACAGCCCTTCGACCTGTTCTCGACGCCCGATGTCGTGCTCCGCAGCTTTTTCTGGAAGAACT
ACCAGGATGTGCTGACCAATCCGACCCTGCGCGGATACATGCTCAACTCGATGATCATCTCGTCGGGCAACGCGCTGCTG
GTCACGACGCTCGGCTTCTTTGCCTGCTACGCACTGACCCGCTTCGACCTCGCGGGCAAGGAGAGCATTTTCTTCTGGAC
GATCACCAACCGCATGGCGCCACCGGCGGTCTTCCTGCTGCCGCTTTTCCTGCTGCTGACGCAGGTCTACAAGATCGGCG
ACTTCTCGCTCGCCGATTCCAGGCTGGGCATGATCCTGGTCTACTGCTCCTTCAACCTTCCCTTCGCCATCTGGACGCTG
CGCCCGACCGTCGAAGGCATTCCGAAGGAGTTGGACGAGGCGGCCTATATGGATGGCGCCAGCCCATGGACGGTCCTCTA
TGACATCGTCTTTCCCCTGGCGCGGCCCGGGCTCGCGGTGACGCTGATCCTGACCTGGGTGTTTGCGTGGAACGAGTACC
TGCTCGCAGCGACCCTCACCAACTTCAATGCGCGAACTCTGACCACCGGCCTGTCCGAATATGTGACGACCACGGGCACG
GCCTGGGGCATCATGGCCGCAATCTCGATGCTGACACTGGTTCCGGCGCTCATCGTCTTTTCGGTGGTGCAACGCCACAT
CGTGGCCGGCCTGACCTTCGGTGCGGTGAAAGGGTGA

Upstream 100 bases:

>100_bases
GGTTCGGCCATCTCCGTCATCGTCCTTTACCTCACCATCGTCGTCTGCTGGCTGCTCTATGTCGGCCTGATTGCGCCCCG
CGTGAAGAGAGGTTGACGCG

Downstream 100 bases:

>100_bases
AGCCATGAGCTCTCAATCAGAAAACAACCAACGCAAGCCGGGATTTCTGCCGATCGAGACGAACTGGTTCGACCGGCTCT
TCATCTCGGTGGTGATCTGG

Product: binding-protein-dependent transporters inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MKTQTPWLPVVLWILISLATLFPIYWLFVISVKQPFDLFSTPDVVLRSFFWKNYQDVLTNPTLRGYMLNSMIISSGNALL
VTTLGFFACYALTRFDLAGKESIFFWTITNRMAPPAVFLLPLFLLLTQVYKIGDFSLADSRLGMILVYCSFNLPFAIWTL
RPTVEGIPKELDEAAYMDGASPWTVLYDIVFPLARPGLAVTLILTWVFAWNEYLLAATLTNFNARTLTTGLSEYVTTTGT
AWGIMAAISMLTLVPALIVFSVVQRHIVAGLTFGAVKG

Sequences:

>Translated_278_residues
MKTQTPWLPVVLWILISLATLFPIYWLFVISVKQPFDLFSTPDVVLRSFFWKNYQDVLTNPTLRGYMLNSMIISSGNALL
VTTLGFFACYALTRFDLAGKESIFFWTITNRMAPPAVFLLPLFLLLTQVYKIGDFSLADSRLGMILVYCSFNLPFAIWTL
RPTVEGIPKELDEAAYMDGASPWTVLYDIVFPLARPGLAVTLILTWVFAWNEYLLAATLTNFNARTLTTGLSEYVTTTGT
AWGIMAAISMLTLVPALIVFSVVQRHIVAGLTFGAVKG
>Mature_278_residues
MKTQTPWLPVVLWILISLATLFPIYWLFVISVKQPFDLFSTPDVVLRSFFWKNYQDVLTNPTLRGYMLNSMIISSGNALL
VTTLGFFACYALTRFDLAGKESIFFWTITNRMAPPAVFLLPLFLLLTQVYKIGDFSLADSRLGMILVYCSFNLPFAIWTL
RPTVEGIPKELDEAAYMDGASPWTVLYDIVFPLARPGLAVTLILTWVFAWNEYLLAATLTNFNARTLTTGLSEYVTTTGT
AWGIMAAISMLTLVPALIVFSVVQRHIVAGLTFGAVKG

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=264, Percent_Identity=30.3030303030303, Blast_Score=110, Evalue=8e-26,
Organism=Escherichia coli, GI1790464, Length=274, Percent_Identity=27.7372262773723, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1789860, Length=293, Percent_Identity=28.3276450511945, Blast_Score=84, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31099; Mature: 31099

Theoretical pI: Translated: 8.16; Mature: 8.16

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTQTPWLPVVLWILISLATLFPIYWLFVISVKQPFDLFSTPDVVLRSFFWKNYQDVLTN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHCC
PTLRGYMLNSMIISSGNALLVTTLGFFACYALTRFDLAGKESIFFWTITNRMAPPAVFLL
CCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHH
PLFLLLTQVYKIGDFSLADSRLGMILVYCSFNLPFAIWTLRPTVEGIPKELDEAAYMDGA
HHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHCCCC
SPWTVLYDIVFPLARPGLAVTLILTWVFAWNEYLLAATLTNFNARTLTTGLSEYVTTTGT
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCH
AWGIMAAISMLTLVPALIVFSVVQRHIVAGLTFGAVKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKTQTPWLPVVLWILISLATLFPIYWLFVISVKQPFDLFSTPDVVLRSFFWKNYQDVLTN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHCC
PTLRGYMLNSMIISSGNALLVTTLGFFACYALTRFDLAGKESIFFWTITNRMAPPAVFLL
CCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHH
PLFLLLTQVYKIGDFSLADSRLGMILVYCSFNLPFAIWTLRPTVEGIPKELDEAAYMDGA
HHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCEEEEEECCHHHHHHHHHHHHHHCCCC
SPWTVLYDIVFPLARPGLAVTLILTWVFAWNEYLLAATLTNFNARTLTTGLSEYVTTTGT
CHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCH
AWGIMAAISMLTLVPALIVFSVVQRHIVAGLTFGAVKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]