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The map label for this gene is ugpA [C]

Identifier: 209547866

GI number: 209547866

Start: 261468

End: 262343

Strand: Reverse

Name: ugpA [C]

Synonym: Rleg2_0257

Alternate gene names: 209547866

Gene position: 262343-261468 (Counterclockwise)

Preceding gene: 209547867

Following gene: 209547865

Centisome position: 5.78

GC content: 60.39

Gene sequence:

>876_bases
ATGCATTCGCAGAAGCTCGGGTGGCTGTTACTGTCACCGACCATCGTGATCCTTGGACTGTTCGGAATCTTTCCGTTCAT
CTACGTCCTCTGGGTCTCGTTCCATGCATGGAACCCGTTCGCGGCCAATCCGGGCATGGTCTTCAACTGGGCCGACAACT
ATCGGCGGCTCGTCTTCGACGCCCAATTCCTGGCATCGCTCGGCATAACCCTCACATTCGTCTTCTTCGCAGTCGTCTCG
GAACTGGTCCTCGGCTATGTCCTCGCCCAGGCGCTGCTGAAGGATTTTCCTGGAAAAGCGGTGTTTCGCACGATCCACAC
CCTGCCGCTGATCATGGCGCCGATCATCGTCGGCTCCGTCTGGAAGCTGATGACCACACCGTCGATCGGCATCATCCCCT
ATCTTCTCAGGAGTTGGTTCGGCTACGATCTGAACATCGGCCAGAGTGCCGTCGCGGCCTTCACCGTCACGGTGATCATG
GACATCTGGCACTGGACGCCGCTCGTCACCCTTTCGCTGATCGCCGCACTGGTCTCGCTGCCGCCCGATCCGTTCGAGCA
GGCGCAGATCGACGGCGCGGGCAAGAGCCAGATCTTCTGGCACATCACGCTCCCGCTGATCCGCCCGGCCCTGCTCGCCA
CGGTGTTCATCAGGCTGATGGATGCGCTGCGCACCGTCGACGAGGTCCTGATGCTGACCGGCGGCGGCCCGGGTTCGTCG
ACACGCTATATCGGCGTCCACATCTTCAAGGAGGTCTTCCCGAAGACCAATTACGGCTATGGTTCGGCCATCTCCGTCAT
CGTCCTTTACCTCACCATCGTCGTCTGCTGGCTGCTCTATGTCGGCCTGATTGCGCCCCGCGTGAAGAGAGGTTGA

Upstream 100 bases:

>100_bases
AAATAAACATCCTCCCCAATTGACGGGTCGTGTCCTACGACCCGTCATCTTTCGCTCCAGGATGGGCGGACGTCACATAA
CGTTCAATGGGGGATAGGCG

Downstream 100 bases:

>100_bases
CGCGATGAAGACCCAGACCCCCTGGCTGCCCGTCGTGCTGTGGATCTTGATCAGCCTCGCGACGCTTTTCCCGATCTACT
GGCTGTTCGTCATATCGGTG

Product: binding-protein-dependent transporters inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MHSQKLGWLLLSPTIVILGLFGIFPFIYVLWVSFHAWNPFAANPGMVFNWADNYRRLVFDAQFLASLGITLTFVFFAVVS
ELVLGYVLAQALLKDFPGKAVFRTIHTLPLIMAPIIVGSVWKLMTTPSIGIIPYLLRSWFGYDLNIGQSAVAAFTVTVIM
DIWHWTPLVTLSLIAALVSLPPDPFEQAQIDGAGKSQIFWHITLPLIRPALLATVFIRLMDALRTVDEVLMLTGGGPGSS
TRYIGVHIFKEVFPKTNYGYGSAISVIVLYLTIVVCWLLYVGLIAPRVKRG

Sequences:

>Translated_291_residues
MHSQKLGWLLLSPTIVILGLFGIFPFIYVLWVSFHAWNPFAANPGMVFNWADNYRRLVFDAQFLASLGITLTFVFFAVVS
ELVLGYVLAQALLKDFPGKAVFRTIHTLPLIMAPIIVGSVWKLMTTPSIGIIPYLLRSWFGYDLNIGQSAVAAFTVTVIM
DIWHWTPLVTLSLIAALVSLPPDPFEQAQIDGAGKSQIFWHITLPLIRPALLATVFIRLMDALRTVDEVLMLTGGGPGSS
TRYIGVHIFKEVFPKTNYGYGSAISVIVLYLTIVVCWLLYVGLIAPRVKRG
>Mature_291_residues
MHSQKLGWLLLSPTIVILGLFGIFPFIYVLWVSFHAWNPFAANPGMVFNWADNYRRLVFDAQFLASLGITLTFVFFAVVS
ELVLGYVLAQALLKDFPGKAVFRTIHTLPLIMAPIIVGSVWKLMTTPSIGIIPYLLRSWFGYDLNIGQSAVAAFTVTVIM
DIWHWTPLVTLSLIAALVSLPPDPFEQAQIDGAGKSQIFWHITLPLIRPALLATVFIRLMDALRTVDEVLMLTGGGPGSS
TRYIGVHIFKEVFPKTNYGYGSAISVIVLYLTIVVCWLLYVGLIAPRVKRG

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=280, Percent_Identity=30.3571428571429, Blast_Score=105, Evalue=5e-24,
Organism=Escherichia coli, GI1787570, Length=248, Percent_Identity=27.4193548387097, Blast_Score=79, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32329; Mature: 32329

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSQKLGWLLLSPTIVILGLFGIFPFIYVLWVSFHAWNPFAANPGMVFNWADNYRRLVFD
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECHHHHHHHHHH
AQFLASLGITLTFVFFAVVSELVLGYVLAQALLKDFPGKAVFRTIHTLPLIMAPIIVGSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
WKLMTTPSIGIIPYLLRSWFGYDLNIGQSAVAAFTVTVIMDIWHWTPLVTLSLIAALVSL
HHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PPDPFEQAQIDGAGKSQIFWHITLPLIRPALLATVFIRLMDALRTVDEVLMLTGGGPGSS
CCCCHHHCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
TRYIGVHIFKEVFPKTNYGYGSAISVIVLYLTIVVCWLLYVGLIAPRVKRG
CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MHSQKLGWLLLSPTIVILGLFGIFPFIYVLWVSFHAWNPFAANPGMVFNWADNYRRLVFD
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECHHHHHHHHHH
AQFLASLGITLTFVFFAVVSELVLGYVLAQALLKDFPGKAVFRTIHTLPLIMAPIIVGSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
WKLMTTPSIGIIPYLLRSWFGYDLNIGQSAVAAFTVTVIMDIWHWTPLVTLSLIAALVSL
HHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PPDPFEQAQIDGAGKSQIFWHITLPLIRPALLATVFIRLMDALRTVDEVLMLTGGGPGSS
CCCCHHHCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
TRYIGVHIFKEVFPKTNYGYGSAISVIVLYLTIVVCWLLYVGLIAPRVKRG
CHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]