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The map label for this gene is agmR [H]

Identifier: 209547799

GI number: 209547799

Start: 190553

End: 191200

Strand: Reverse

Name: agmR [H]

Synonym: Rleg2_0190

Alternate gene names: 209547799

Gene position: 191200-190553 (Counterclockwise)

Preceding gene: 209547800

Following gene: 209547798

Centisome position: 4.21

GC content: 65.43

Gene sequence:

>648_bases
ATGCAGGAACAGACCATCATCATTGCCGACGATCATCCGCTGTTTCGCGATGCGCTGCGCCAGGCCGTCATCGGCATGGA
AGGCCGGCAGGCGATCGTCGAGGCCGGCGATTTCGCGGCGGCGCGCAAAGCGGCGGGCGCCCATGCGGAGGCCGACCTGA
TGCTGCTCGACCTCGCCATGCCCGGGGTCAGCGGCTTTTCCGGCCTGATGGCGCTGCGCTCCGAATTCGCCAGCCTGCCG
ATCATCATCGTCTCGGCAACCGACGATGCGACGACGATCCGACGGGCGCTGGAACTCGGCGCCTCCGGCTTCATTTCCAA
ATCCGCCGGCATCGACGACATTCGCCGCAGCATCCAGACGGTGCTTGCCGGCGACATCGCCACGCCGGAGAACTATCGTG
GCGGTCAGGAGCAGGATCCCGATGTCGCCGACCTGATCCACCGCCTGCACACGCTGACGCCGCAGCAGAGCCGGGTGCTG
ACCATGCTCGGCGAAGGGCTGTTGAACAAGCAGATCGCCTATGAGCTCGGCGTCTCCGAGGCGACGATCAAGGCGCATGT
CTCGGCGATCCTCTTGAAGCTCGACGTCGACAGCCGCACCCAGGCGGTCATCCAGCTCGGCAAGATCAACATGGCGATGG
TCGCCTGA

Upstream 100 bases:

>100_bases
GACCTGATCTGATATAGTCATATCACTAGGCATGCATGCAGAGGTCGGAGGGGACGGCGGCGCATGCAGGCACGATCGGG
CTCTTGGGAGGGAGTTTTCG

Downstream 100 bases:

>100_bases
AACCCTTGCAATAACAGGATTTTATTCCTCCTTTGCCTTTACTCGGGCGGCACGGTCGGTTAATATTCCGGCCGGCTGAC
GCGCGGATGAGCCGCGCACG

Product: LuxR family transcriptional regulator

Products: NA

Alternate protein names: Protein AgmR [H]

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MQEQTIIIADDHPLFRDALRQAVIGMEGRQAIVEAGDFAAARKAAGAHAEADLMLLDLAMPGVSGFSGLMALRSEFASLP
IIIVSATDDATTIRRALELGASGFISKSAGIDDIRRSIQTVLAGDIATPENYRGGQEQDPDVADLIHRLHTLTPQQSRVL
TMLGEGLLNKQIAYELGVSEATIKAHVSAILLKLDVDSRTQAVIQLGKINMAMVA

Sequences:

>Translated_215_residues
MQEQTIIIADDHPLFRDALRQAVIGMEGRQAIVEAGDFAAARKAAGAHAEADLMLLDLAMPGVSGFSGLMALRSEFASLP
IIIVSATDDATTIRRALELGASGFISKSAGIDDIRRSIQTVLAGDIATPENYRGGQEQDPDVADLIHRLHTLTPQQSRVL
TMLGEGLLNKQIAYELGVSEATIKAHVSAILLKLDVDSRTQAVIQLGKINMAMVA
>Mature_215_residues
MQEQTIIIADDHPLFRDALRQAVIGMEGRQAIVEAGDFAAARKAAGAHAEADLMLLDLAMPGVSGFSGLMALRSEFASLP
IIIVSATDDATTIRRALELGASGFISKSAGIDDIRRSIQTVLAGDIATPENYRGGQEQDPDVADLIHRLHTLTPQQSRVL
TMLGEGLLNKQIAYELGVSEATIKAHVSAILLKLDVDSRTQAVIQLGKINMAMVA

Specific function: Positive activator for glycerol metabolism [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788521, Length=207, Percent_Identity=34.2995169082126, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1786747, Length=201, Percent_Identity=26.3681592039801, Blast_Score=80, Evalue=8e-17,
Organism=Escherichia coli, GI1788712, Length=197, Percent_Identity=29.4416243654822, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI1788546, Length=208, Percent_Identity=25.4807692307692, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI1787473, Length=221, Percent_Identity=28.0542986425339, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1790102, Length=198, Percent_Identity=30.8080808080808, Blast_Score=70, Evalue=9e-14,
Organism=Escherichia coli, GI1789937, Length=161, Percent_Identity=24.223602484472, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1788222, Length=195, Percent_Identity=22.5641025641026, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 22926; Mature: 22926

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEQTIIIADDHPLFRDALRQAVIGMEGRQAIVEAGDFAAARKAAGAHAEADLMLLDLAM
CCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECC
PGVSGFSGLMALRSEFASLPIIIVSATDDATTIRRALELGASGFISKSAGIDDIRRSIQT
CCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
VLAGDIATPENYRGGQEQDPDVADLIHRLHTLTPQQSRVLTMLGEGLLNKQIAYELGVSE
HHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCH
ATIKAHVSAILLKLDVDSRTQAVIQLGKINMAMVA
HHHHHHHHHEEEEECCCCHHHHHHHHCCCEEEEEC
>Mature Secondary Structure
MQEQTIIIADDHPLFRDALRQAVIGMEGRQAIVEAGDFAAARKAAGAHAEADLMLLDLAM
CCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECC
PGVSGFSGLMALRSEFASLPIIIVSATDDATTIRRALELGASGFISKSAGIDDIRRSIQT
CCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
VLAGDIATPENYRGGQEQDPDVADLIHRLHTLTPQQSRVLTMLGEGLLNKQIAYELGVSE
HHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCH
ATIKAHVSAILLKLDVDSRTQAVIQLGKINMAMVA
HHHHHHHHHEEEEECCCCHHHHHHHHCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1938886; 10984043 [H]