| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is 209547798
Identifier: 209547798
GI number: 209547798
Start: 189762
End: 190439
Strand: Reverse
Name: 209547798
Synonym: Rleg2_0189
Alternate gene names: NA
Gene position: 190439-189762 (Counterclockwise)
Preceding gene: 209547799
Following gene: 209547797
Centisome position: 4.2
GC content: 67.26
Gene sequence:
>678_bases ATGCTGTCACACGATCAGATCTGGGGAGCGATCGACAGGCTTGCCGAGCGGCACGAGCTGACGCCATCCGGTCTTGCGCG GCGCGCCGGGCTCGACCCCACCTCCTTCAACAAGTCAAAACGGCTTTCCGCCGATGGGCGGCTGCGCTGGCCCTCGACGG AATCGATCGCCAAGGTGCTCGACGCCACCGGGGCGAGCGTCGAGCAGTTCCTTGCCTTCCTGCAGCCGGATGCCGGTTTT TCGAAGCGGCCGGCCGGCCAGTCTGACGGCGCCTTTCCGCCGCAGGGCAGTTCGATCCCGCTGCTCGGCTTTGCCCAAGC CGGCGCCGGCGGCTTCTTCGACGATGGCGGTTTTCCAGCCGGCCAGGGCTGGGACGTGGTGGAATTTCCGGCGGCTCCGG CGCAGAAATCCGCCGTCTATGCGCTGGAGGTGCAGGGCGAGAGCATGATGCCGCTCTACCGCGACGGCGACGTGCTGATC GTCGAGCCCGGCGCGCAGGTCCGCCGCAACGACCGCGTCGTCGTGCGCACCTGCGAGGGCGAGGTGATGGCCAAGGTGCT GCTGCGCCAAAGCCCGCGCTCGATCGAGCTGATGTCGCTCAATCCCGAACATCCCAACCGCACCCTCGAGCTGTCCGATG TCGATTGGATCGCCCGCATCATCTGGGCCAGCCAATAG
Upstream 100 bases:
>100_bases ACAGGATTTTATTCCTCCTTTGCCTTTACTCGGGCGGCACGGTCGGTTAATATTCCGGCCGGCTGACGCGCGGATGAGCC GCGCACGGAATCGGGCGCCT
Downstream 100 bases:
>100_bases GAAGATATTCCATGCGCCCTGCCGCCGTCTTCACAGGTCTCATAGGCATGGTGGTGGTGGCCGGCCTGCTGATGGCGGGT GAAGCAAGGCTGCGGGGCGG
Product: phage repressor
Products: NA
Alternate protein names: Peptidase; Transcriptional Regulator; Bacteriophage Repressor; Peptidase Family S; S24 Family Peptidase; Transcriptional Regulator Protein; Phage-Related Transcriptional Regulator Protein; LexA-Like Transcriptional Repressor; Peptidase Family; Transcription Regulator Protein; Phage-Related Transcriptional Regulator; Peptidase S
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MLSHDQIWGAIDRLAERHELTPSGLARRAGLDPTSFNKSKRLSADGRLRWPSTESIAKVLDATGASVEQFLAFLQPDAGF SKRPAGQSDGAFPPQGSSIPLLGFAQAGAGGFFDDGGFPAGQGWDVVEFPAAPAQKSAVYALEVQGESMMPLYRDGDVLI VEPGAQVRRNDRVVVRTCEGEVMAKVLLRQSPRSIELMSLNPEHPNRTLELSDVDWIARIIWASQ
Sequences:
>Translated_225_residues MLSHDQIWGAIDRLAERHELTPSGLARRAGLDPTSFNKSKRLSADGRLRWPSTESIAKVLDATGASVEQFLAFLQPDAGF SKRPAGQSDGAFPPQGSSIPLLGFAQAGAGGFFDDGGFPAGQGWDVVEFPAAPAQKSAVYALEVQGESMMPLYRDGDVLI VEPGAQVRRNDRVVVRTCEGEVMAKVLLRQSPRSIELMSLNPEHPNRTLELSDVDWIARIIWASQ >Mature_225_residues MLSHDQIWGAIDRLAERHELTPSGLARRAGLDPTSFNKSKRLSADGRLRWPSTESIAKVLDATGASVEQFLAFLQPDAGF SKRPAGQSDGAFPPQGSSIPLLGFAQAGAGGFFDDGGFPAGQGWDVVEFPAAPAQKSAVYALEVQGESMMPLYRDGDVLI VEPGAQVRRNDRVVVRTCEGEVMAKVLLRQSPRSIELMSLNPEHPNRTLELSDVDWIARIIWASQ
Specific function: Unknown
COG id: COG2932
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24413; Mature: 24413
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSHDQIWGAIDRLAERHELTPSGLARRAGLDPTSFNKSKRLSADGRLRWPSTESIAKVL CCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHH DATGASVEQFLAFLQPDAGFSKRPAGQSDGAFPPQGSSIPLLGFAQAGAGGFFDDGGFPA HCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCC GQGWDVVEFPAAPAQKSAVYALEVQGESMMPLYRDGDVLIVEPGAQVRRNDRVVVRTCEG CCCCCEEECCCCCCCCCEEEEEEECCCCCCCEEECCCEEEECCCHHHCCCCCEEEEECCH EVMAKVLLRQSPRSIELMSLNPEHPNRTLELSDVDWIARIIWASQ HHHHHHHHHCCCCCEEEEEECCCCCCCEEEECCHHHHHHHHHCCC >Mature Secondary Structure MLSHDQIWGAIDRLAERHELTPSGLARRAGLDPTSFNKSKRLSADGRLRWPSTESIAKVL CCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCHHHHHHHH DATGASVEQFLAFLQPDAGFSKRPAGQSDGAFPPQGSSIPLLGFAQAGAGGFFDDGGFPA HCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCC GQGWDVVEFPAAPAQKSAVYALEVQGESMMPLYRDGDVLIVEPGAQVRRNDRVVVRTCEG CCCCCEEECCCCCCCCCEEEEEEECCCCCCCEEECCCEEEECCCHHHCCCCCEEEEECCH EVMAKVLLRQSPRSIELMSLNPEHPNRTLELSDVDWIARIIWASQ HHHHHHHHHCCCCCEEEEEECCCCCCCEEEECCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA