| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is cutC [H]
Identifier: 209547758
GI number: 209547758
Start: 142799
End: 143524
Strand: Direct
Name: cutC [H]
Synonym: Rleg2_0147
Alternate gene names: 209547758
Gene position: 142799-143524 (Clockwise)
Preceding gene: 209547757
Following gene: 209547766
Centisome position: 3.15
GC content: 66.8
Gene sequence:
>726_bases GTGACCATCCTGCTGGAAGTGTGTGTGGATAGCGCCGAGGGCCTTGCCGCCGCGATTGAAGGCGGCGCCGGCCGCATCGA GCTCTGCTCGGCGCTGGAGCTCGGCGGCCTGACGCCTCTGCCGAGCCTGATGAAGATCGCCGCGCGGGCGCCCATCCCAA TCTATGCAATGATCCGCCCGCATGCCGGCCCCTTCATCTTCGGGGCGGCGGATGAGGAAGCGATGCTGCTCGATATCGAC GCCGTGCGCGCCGCAGGCCTCGCCGGCGTCGTCATCGGCGCCAACCGGCTGGATGGTACCCTCGACATGCCGCTGATCCA CCGTCTGAAGGCGCATGCCGCAGGCCTCGGCTCGACCCTGCATCGCGCCTTCGATCTGGTGCCGGATGCCGATCAGGCAC TGGAACAGGCGGTCGAACTCGGCGTTGAGCGCATCCTGACCTCCGGCTGCGCGCTGAAGGCACCCGACGGAATCGAAACC CTGCAACGCCTCTCGGCCAAGGCGACTGGGCGCATATCCATCATGCCGGGCAGCGGCATCCGCCCGGCCAATGCCGGGGC GATCTTGCAGGCAACCGGTGCCCGCGAGGTGCATGGGTCCTGCAGCTTGCCTGTGGAAAGCGCCGATCCGCGTGCGGTCG CCTTTGGTTTCGAGGCGAAGAGTATGAATAAGACGGATGTCGCGGTGGTCAGGGAGATGTGCAGGGTGATTGCGGCGGTG GGTTAG
Upstream 100 bases:
>100_bases CCGCCGATGCCTGCGCCGTCATCATCGAAGCGGCGGCGAGACTTACATCGGAAGCCGTCGCGCAGACCATGGCGCGCGCC GAAGCCAGGGAGAGCGCCGC
Downstream 100 bases:
>100_bases CGAGCGCCGCCGACGCAAACACAGCGCTTAACGGCTGCCCCTCACCCTAACCCTCTCCCCGTTCTGACGGGGAGAGGGGA CGTGCCCTGCGCGAGGTTAG
Product: CutC family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MTILLEVCVDSAEGLAAAIEGGAGRIELCSALELGGLTPLPSLMKIAARAPIPIYAMIRPHAGPFIFGAADEEAMLLDID AVRAAGLAGVVIGANRLDGTLDMPLIHRLKAHAAGLGSTLHRAFDLVPDADQALEQAVELGVERILTSGCALKAPDGIET LQRLSAKATGRISIMPGSGIRPANAGAILQATGAREVHGSCSLPVESADPRAVAFGFEAKSMNKTDVAVVREMCRVIAAV G
Sequences:
>Translated_241_residues MTILLEVCVDSAEGLAAAIEGGAGRIELCSALELGGLTPLPSLMKIAARAPIPIYAMIRPHAGPFIFGAADEEAMLLDID AVRAAGLAGVVIGANRLDGTLDMPLIHRLKAHAAGLGSTLHRAFDLVPDADQALEQAVELGVERILTSGCALKAPDGIET LQRLSAKATGRISIMPGSGIRPANAGAILQATGAREVHGSCSLPVESADPRAVAFGFEAKSMNKTDVAVVREMCRVIAAV G >Mature_240_residues TILLEVCVDSAEGLAAAIEGGAGRIELCSALELGGLTPLPSLMKIAARAPIPIYAMIRPHAGPFIFGAADEEAMLLDIDA VRAAGLAGVVIGANRLDGTLDMPLIHRLKAHAAGLGSTLHRAFDLVPDADQALEQAVELGVERILTSGCALKAPDGIETL QRLSAKATGRISIMPGSGIRPANAGAILQATGAREVHGSCSLPVESADPRAVAFGFEAKSMNKTDVAVVREMCRVIAAVG
Specific function: Involved in copper homeostasis [H]
COG id: COG3142
COG function: function code P; Uncharacterized protein involved in copper resistance
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CutC family [H]
Homologues:
Organism=Homo sapiens, GI148596990, Length=239, Percent_Identity=41.0041841004184, Blast_Score=155, Evalue=4e-38, Organism=Escherichia coli, GI87081995, Length=198, Percent_Identity=39.8989898989899, Blast_Score=126, Evalue=1e-30, Organism=Caenorhabditis elegans, GI17556905, Length=216, Percent_Identity=34.2592592592593, Blast_Score=134, Evalue=5e-32, Organism=Drosophila melanogaster, GI21355415, Length=202, Percent_Identity=40.5940594059406, Blast_Score=133, Evalue=1e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005627 [H]
Pfam domain/function: PF03932 CutC [H]
EC number: NA
Molecular weight: Translated: 24760; Mature: 24629
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTILLEVCVDSAEGLAAAIEGGAGRIELCSALELGGLTPLPSLMKIAARAPIPIYAMIRP CEEEEEEHHCCCCCCEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEEECC HAGPFIFGAADEEAMLLDIDAVRAAGLAGVVIGANRLDGTLDMPLIHRLKAHAAGLGSTL CCCCEEEECCCCCEEEEEHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH HRAFDLVPDADQALEQAVELGVERILTSGCALKAPDGIETLQRLSAKATGRISIMPGSGI HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCC RPANAGAILQATGAREVHGSCSLPVESADPRAVAFGFEAKSMNKTDVAVVREMCRVIAAV CCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHC G C >Mature Secondary Structure TILLEVCVDSAEGLAAAIEGGAGRIELCSALELGGLTPLPSLMKIAARAPIPIYAMIRP EEEEEEHHCCCCCCEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEEECC HAGPFIFGAADEEAMLLDIDAVRAAGLAGVVIGANRLDGTLDMPLIHRLKAHAAGLGSTL CCCCEEEECCCCCEEEEEHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH HRAFDLVPDADQALEQAVELGVERILTSGCALKAPDGIETLQRLSAKATGRISIMPGSGI HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCCC RPANAGAILQATGAREVHGSCSLPVESADPRAVAFGFEAKSMNKTDVAVVREMCRVIAAV CCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHC G C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA