| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is qor [C]
Identifier: 209547723
GI number: 209547723
Start: 104569
End: 105573
Strand: Direct
Name: qor [C]
Synonym: Rleg2_0112
Alternate gene names: 209547723
Gene position: 104569-105573 (Clockwise)
Preceding gene: 209547722
Following gene: 209547724
Centisome position: 2.3
GC content: 59.6
Gene sequence:
>1005_bases ATGAAGGCATTCGTCGTTGATAAGTACAAAAAGAAGGGCGCTTTGCGCCTGGCCAGCCTGCCGGAACCGGAATTGCAGGA CAATGATGTCCTTGTCCGGGTTCAGGCTACGGCCGTAAACCTTCTGGACTCCAAGCTGCGGGACGGAGAGTTCAAGCTCA TTCTTCCCTATCGTCCGCCCTTCGTCCTCGGCCACGACGTTGCCGGAACAGTTGTTAGGGCGGGACCGAGGGTCAGGCGG CTCAAGGTGGGTGACGAGGTCTACGCACGGCCGCGCGATCATCGGGTCGGCACATTCGCCGAATTCATCGCCATCGATGA AGCCGATTTGGCGCTGAAACCGAACAACCTCAGCATGGCCGAAGCGGCGTCCATCCCCCTGGTGGGGCTAACCGCGTGGC AGGCGCTGGTCGAGGTGGGCAAGGTGAAGCCCGGCCAGAAGGTCTTCATTCAGGCCGGTTCCGGCGGTGTCGGGACTTTC GCCATTCAGCTCGCCAAGCATCTTGGCGCGATGGTGGCGACGACGACCAGCGCTGGAAATGCCGAGCTCGCCAAAAGTCT CGGGGCGGATGTGATTGTCGACTACAAGAGCCAGGATTTTGAGAAGGTCTTGTCGGGCTATGATCTGGTGCTGAACAGTC AGGATCCGAAGACGCTTGAAAAATCACTGGCTGTGCTGAAGCCGGGTGGCCGGCTCATCTCCATTTCCGGTCCGCCCGAT CCTGCTTTCGCCAGGGAACTCGGCCTGAACCTGTTTCTGAAACTGGTGCTGCGCTTGCTGAGCCGAGGGGTTCGGAAAAA GGCCAAGCGTCTAGGCATAGGCTATTCATTCCTGTTCATGCGCGCCGAGGGGCGGCAGTTGAATGAGATCACGCGCCTGA TCGAACAAGGCGCGATCCGGCCGGTCGTCGACAAGGTCTTCCCGTTTGAAAAAACCGGCGATGCGCTGGCTTATGTCGAG ACCGGGCGTGCAAAGGGCAAGGTGGTCATCACGGTCGCAGACTGA
Upstream 100 bases:
>100_bases ACATGGCGGGATCTTCCAGAACCACGCCGATTTCGTGCCGAAGGCTTTGTCCTTCCTTGCAGCCTGACATCCCACCAGAC TTCGAATTGGAGAAAGCCTC
Downstream 100 bases:
>100_bases GGTCGACCTGACCGACGCGGCGTGCGTTGCGAGACGAACGCGAGAAATAATTCCAACTCTGAAAGCGAAAAATGACCAGC AAGACACTCTTTGAACCCTT
Product: alcohol dehydrogenase zinc-binding domain-containing protein
Products: NADP(+); Semiquinone. [C]
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MKAFVVDKYKKKGALRLASLPEPELQDNDVLVRVQATAVNLLDSKLRDGEFKLILPYRPPFVLGHDVAGTVVRAGPRVRR LKVGDEVYARPRDHRVGTFAEFIAIDEADLALKPNNLSMAEAASIPLVGLTAWQALVEVGKVKPGQKVFIQAGSGGVGTF AIQLAKHLGAMVATTTSAGNAELAKSLGADVIVDYKSQDFEKVLSGYDLVLNSQDPKTLEKSLAVLKPGGRLISISGPPD PAFARELGLNLFLKLVLRLLSRGVRKKAKRLGIGYSFLFMRAEGRQLNEITRLIEQGAIRPVVDKVFPFEKTGDALAYVE TGRAKGKVVITVAD
Sequences:
>Translated_334_residues MKAFVVDKYKKKGALRLASLPEPELQDNDVLVRVQATAVNLLDSKLRDGEFKLILPYRPPFVLGHDVAGTVVRAGPRVRR LKVGDEVYARPRDHRVGTFAEFIAIDEADLALKPNNLSMAEAASIPLVGLTAWQALVEVGKVKPGQKVFIQAGSGGVGTF AIQLAKHLGAMVATTTSAGNAELAKSLGADVIVDYKSQDFEKVLSGYDLVLNSQDPKTLEKSLAVLKPGGRLISISGPPD PAFARELGLNLFLKLVLRLLSRGVRKKAKRLGIGYSFLFMRAEGRQLNEITRLIEQGAIRPVVDKVFPFEKTGDALAYVE TGRAKGKVVITVAD >Mature_334_residues MKAFVVDKYKKKGALRLASLPEPELQDNDVLVRVQATAVNLLDSKLRDGEFKLILPYRPPFVLGHDVAGTVVRAGPRVRR LKVGDEVYARPRDHRVGTFAEFIAIDEADLALKPNNLSMAEAASIPLVGLTAWQALVEVGKVKPGQKVFIQAGSGGVGTF AIQLAKHLGAMVATTTSAGNAELAKSLGADVIVDYKSQDFEKVLSGYDLVLNSQDPKTLEKSLAVLKPGGRLISISGPPD PAFARELGLNLFLKLVLRLLSRGVRKKAKRLGIGYSFLFMRAEGRQLNEITRLIEQGAIRPVVDKVFPFEKTGDALAYVE TGRAKGKVVITVAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]
Homologues:
Organism=Homo sapiens, GI47519420, Length=361, Percent_Identity=35.4570637119114, Blast_Score=186, Evalue=3e-47, Organism=Homo sapiens, GI22538446, Length=357, Percent_Identity=28.8515406162465, Blast_Score=112, Evalue=5e-25, Organism=Homo sapiens, GI22538444, Length=357, Percent_Identity=28.8515406162465, Blast_Score=112, Evalue=5e-25, Organism=Homo sapiens, GI18379349, Length=317, Percent_Identity=27.7602523659306, Blast_Score=108, Evalue=1e-23, Organism=Homo sapiens, GI41872631, Length=236, Percent_Identity=33.8983050847458, Blast_Score=94, Evalue=1e-19, Organism=Homo sapiens, GI194239674, Length=352, Percent_Identity=26.7045454545455, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI13236495, Length=352, Percent_Identity=26.7045454545455, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI24308257, Length=349, Percent_Identity=25.7879656160458, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI194239676, Length=337, Percent_Identity=26.1127596439169, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI28557745, Length=229, Percent_Identity=31.8777292576419, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI90669511, Length=157, Percent_Identity=33.1210191082803, Blast_Score=75, Evalue=9e-14, Organism=Escherichia coli, GI1790485, Length=231, Percent_Identity=29.8701298701299, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI1790045, Length=272, Percent_Identity=27.5735294117647, Blast_Score=75, Evalue=8e-15, Organism=Caenorhabditis elegans, GI71987554, Length=370, Percent_Identity=29.4594594594595, Blast_Score=106, Evalue=1e-23, Organism=Caenorhabditis elegans, GI17507255, Length=345, Percent_Identity=27.536231884058, Blast_Score=100, Evalue=9e-22, Organism=Caenorhabditis elegans, GI71988145, Length=219, Percent_Identity=26.9406392694064, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17562584, Length=270, Percent_Identity=27.7777777777778, Blast_Score=81, Evalue=7e-16, Organism=Caenorhabditis elegans, GI17562876, Length=263, Percent_Identity=28.8973384030418, Blast_Score=77, Evalue=9e-15, Organism=Caenorhabditis elegans, GI17562582, Length=218, Percent_Identity=28.8990825688073, Blast_Score=68, Evalue=6e-12, Organism=Caenorhabditis elegans, GI212642053, Length=236, Percent_Identity=31.3559322033898, Blast_Score=65, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6319621, Length=282, Percent_Identity=27.6595744680851, Blast_Score=88, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6319520, Length=346, Percent_Identity=26.878612716763, Blast_Score=86, Evalue=7e-18, Organism=Saccharomyces cerevisiae, GI6324195, Length=265, Percent_Identity=30.188679245283, Blast_Score=64, Evalue=3e-11, Organism=Drosophila melanogaster, GI24581341, Length=363, Percent_Identity=28.9256198347107, Blast_Score=101, Evalue=6e-22, Organism=Drosophila melanogaster, GI24581339, Length=363, Percent_Identity=28.9256198347107, Blast_Score=101, Evalue=6e-22, Organism=Drosophila melanogaster, GI19920632, Length=236, Percent_Identity=32.2033898305085, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI221330659, Length=236, Percent_Identity=32.2033898305085, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI24581345, Length=232, Percent_Identity=31.4655172413793, Blast_Score=82, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR014182 - InterPro: IPR011032 - InterPro: IPR016040 - InterPro: IPR002364 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: 1.6.5.5 [C]
Molecular weight: Translated: 36165; Mature: 36165
Theoretical pI: Translated: 10.37; Mature: 10.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAFVVDKYKKKGALRLASLPEPELQDNDVLVRVQATAVNLLDSKLRDGEFKLILPYRPP CCCEEEEHHHCCCCEEECCCCCCCCCCCCEEEEEEHHHHHHHHHHCCCCCEEEEECCCCC FVLGHDVAGTVVRAGPRVRRLKVGDEVYARPRDHRVGTFAEFIAIDEADLALKPNNLSMA EEECCCCCCHHHHCCCCEEEEEECCHHHCCCCCCCCCHHHHHEEECCCCEEECCCCCCHH EAASIPLVGLTAWQALVEVGKVKPGQKVFIQAGSGGVGTFAIQLAKHLGAMVATTTSAGN HHCCCCEEHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCEEEEECCCCC AELAKSLGADVIVDYKSQDFEKVLSGYDLVLNSQDPKTLEKSLAVLKPGGRLISISGPPD HHHHHHCCCCEEEECCCCHHHHHHCCCEEEECCCCHHHHHHHHHEECCCCEEEEECCCCC PAFARELGLNLFLKLVLRLLSRGVRKKAKRLGIGYSFLFMRAEGRQLNEITRLIEQGAIR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHCCCC PVVDKVFPFEKTGDALAYVETGRAKGKVVITVAD HHHHHHCCCCCCCCEEEEEECCCCCCEEEEEEEC >Mature Secondary Structure MKAFVVDKYKKKGALRLASLPEPELQDNDVLVRVQATAVNLLDSKLRDGEFKLILPYRPP CCCEEEEHHHCCCCEEECCCCCCCCCCCCEEEEEEHHHHHHHHHHCCCCCEEEEECCCCC FVLGHDVAGTVVRAGPRVRRLKVGDEVYARPRDHRVGTFAEFIAIDEADLALKPNNLSMA EEECCCCCCHHHHCCCCEEEEEECCHHHCCCCCCCCCHHHHHEEECCCCEEECCCCCCHH EAASIPLVGLTAWQALVEVGKVKPGQKVFIQAGSGGVGTFAIQLAKHLGAMVATTTSAGN HHCCCCEEHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHCCEEEEECCCCC AELAKSLGADVIVDYKSQDFEKVLSGYDLVLNSQDPKTLEKSLAVLKPGGRLISISGPPD HHHHHHCCCCEEEECCCCHHHHHHCCCEEEECCCCHHHHHHHHHEECCCCEEEEECCCCC PAFARELGLNLFLKLVLRLLSRGVRKKAKRLGIGYSFLFMRAEGRQLNEITRLIEQGAIR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHCCCC PVVDKVFPFEKTGDALAYVETGRAKGKVVITVAD HHHHHHCCCCCCCCEEEEEECCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NADPH [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): 0.017 {9,10-phenanthrenequinone}} 0.0153 {2,6-dichlorophenolindophenol}} 0.013 {2,6-dichlorophenolindophenol}} 0.26 {1,4-naphthoquinone}} 0.065 {1,4-benzoquinone}} 0.007 {NADPH}} 0.0069 {NADPH}} 0.0024 {1,2-naphthoquinone}} [C]
Substrates: NADPH; Quinone [C]
Specific reaction: NADPH + Quinone = NADP(+) + Semiquinone. [C]
General reaction: Oxidation; Reduction [C]
Inhibitor: 2, 3-Dimercaptopropanol; 2, 5-Dichloro-3, 6-dihydroxy -1, 4-benzoquinone; 4-Hydroxy coumarin; 5, 5'-Dithiobis (2-nitrobenzoate); ADP; Cibacronblue3GA; Coumarin; Cu2+; Dicoumarol warfarin, coumarin; Dithiothreitol preincubation with 9, 10-phenanthrenequino
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11418146 [H]