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The map label for this gene is mcpA [H]

Identifier: 209547664

GI number: 209547664

Start: 52434

End: 54770

Strand: Reverse

Name: mcpA [H]

Synonym: Rleg2_0052

Alternate gene names: 209547664

Gene position: 54770-52434 (Counterclockwise)

Preceding gene: 209547665

Following gene: 209547656

Centisome position: 1.21

GC content: 63.37

Gene sequence:

>2337_bases
ATGTCCATTTTCCGCATGAAATCGCTTGCTGCGAAACTCATCGTCATCACCGGCATCGCCATCGCGCTTGTCCTTGTCGT
TTCGAACTTTTTCCTCATCGGCCAGACCCGGGACCGCGTCCAGACGCTGACGATGGATCAGGCGAACCTCGAGGCGAAAG
CGATCGCCAATGAAATCGCCGCCAATGTCGGCGAACTCGCCAGCGCCGCACGCACCATGTCCGGCGTCATCGGCCGCGGC
CATGAAGGCAAATCGCTCGATCGCAAGGGCATGATCAACGTGCTGAAGGCCAATCTCGAACAGAACGCCTTCGCCTTCGG
CAGCTGGTTCTGCGAACAGCTCGGCGCGCTTGACGGCAAGACCACCGAGATCGCCAACAACAATGATGAGGGCACGAACA
AGAACGGCGCGTTTGCGCCCTACTGGTCGAAAACCAAGGACGGCGGCATCCAATATTCGACGTTCGACAATGATTATACC
GCCGAATGGTGGAAGCTCGCCGCCGACAGCGGCAAGGGCGCGATCACCACGCCTTATATGGCCGAAGGTACCGACGTTCC
GACGCTGTTGACCTCGATCGCCTATCCCGTGATGTCAGGTGGCAAGATGATCGGCGTCGGCGGCGTCGACATCTCGCTGA
AATCGCTGACCGACAAGCTGCAGGCGCTGCATCCCTTCGGCTCGGGCCGCGTCACGCTGCTGTCGCAGACCGGCAACTGG
ATCGTCGCGCCGATCCCCGACCTGATGACCAAGCAGTATGACGGCGAAGGCGCCGACACCGTCAAATCGGCGCTGTCGAG
CAAACAGCCAGGCCTCGTCAGGAACCTCACCTATGACGGCCTCGATCCCTTCGACCGTGTCGTCTATCCGTTCGCGGTTC
CCGGCGTCAACGCCACCTGGATCGTGCTCGTCGATGTGCCGCATACGGCGATCAACGCACCGGTGCAGGATCAGACCACC
ATGATGATCGTCAACGGCCTGATCGTGCTCGGCGCGGTGATGCTGGCGCTCTATTTCGCCGTCCGCTCGCTGGTGCAGCG
GCCGCTCGGCGGGCTGGTTGCCAGCGTCGAAGCGCTCGGTGACGGCAAGTATGACGAGCCGGTCGCCGCCCAGGACCGTA
CCGACGAAATCGGTTCGGTCGCCAAGGCACTCGAAGGCTTCCGCTTCACGCTCGCCGACAGCCGTCGTCTCGAAGACGAG
GCCGCCAGGGAGCGGCAGGCGGCGGAGACCGAGCGCGGCCGTTCGGAATCGGAACGCCAGCAATCGGTATCGCTGCAGCG
CCATATCGTCTCGATCGTCGGCACCGGCCTTTCGGCGCTGTCGCAAGGCAATCTCAGCCACCGCATCACCGATGATTTCC
CCGGCGAATACGGCAAGCTGAAACAGGACTTCAACGCCGCCCTTGCGAGCCTCGAAGAAACCATCAATACGATGAACCTC
AGCGTCGCCAATATCGGCTTGGGCACCGGCGAAATCAGCAACAGCGCCTCCGACCTCGCCAAGCGCACCGAACAGCAGGC
GGCAAGCCTGGAGGAGACGGCGGCGGCGCTCAACGAACTCACCGCCCAGGTCGATTCCAGCGCCGACAACGCCCGTACGG
CCGCCGACAACGTCAACCTCGCCTGCCAGGATGCCGAAAAGTCCGGCGAAGTGGTGCAGAAGGCGATCGCCTCGATGCAG
GGCATCGAACAGTCTTCGACGGAAGTTTCGAGGATCATTAGCGTCATCGACGAGATCGCCTTCCAGACCAACCTGCTGGC
GCTGAACGCCGGTGTCGAGGCGGCGCGTGCCGGGGAAGCCGGCAAGGGCTTTGCCGTCGTCGCCCAGGAGGTGCGCGAAC
TGGCGCAGCGTTCGGCCAATGCCGCCAAGGAAATCAAGACGCTGATCAACACCTCGGCCGTCCAGGTCAAGGAAGGCGTC
GATCTCGTCGGGCGAGCCGGCGGCACGCTGCACAAGATCGCCGAACAGGTGATGAGCATCAACGATCTCATCCGGCAGAT
CTCGGCATCGGCCAGCGAACAGGCCGTCGGCCTGAAGGAGATCAACCAGGCCATGAACCAGATGGACCAGGTGACGCAGC
AGAATGCGGCGATGGTGGAGGAAGCAACGGCCGCCAGCGTCGCCCTCAACGACGAGGCACAGACGCTGAAGGCGCTTGCT
ACCCGTTTCAGGGTCGCAGGCTCGAGCAATGCCGCAGCACTGACCTCGGTTGCCCAGCAGATGCGGGCGCCGACTGCCTC
GGCCGCTTCGCCGCATGCCACCCCCGCGGTCCGCCGTGCGGCAGCGCCATCGCGCGGCTCGGCTGCCGTGGCGCAGGATA
GCTGGGAAGAGTTCTAA

Upstream 100 bases:

>100_bases
AAGATGCACCGCGCTGCAGGCGGCGGCTCCATGACGGGGCGATGCCTTCGCTCCTGCGCCGGAGAATGCCCGTTCGGCGC
ATCCTTGCCCGAGGATTCCC

Downstream 100 bases:

>100_bases
GCATCAGGTCCTTATCATGCAAAAGGCGCCGGGCTGAGCCGGCGCCTTTTGCATTCAGGCATAAATGACGCTCAGGCAGC
GTTCGACGTCTGCTCTTCGT

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: Methyl-accepting chemotaxis protein [H]

Number of amino acids: Translated: 778; Mature: 777

Protein sequence:

>778_residues
MSIFRMKSLAAKLIVITGIAIALVLVVSNFFLIGQTRDRVQTLTMDQANLEAKAIANEIAANVGELASAARTMSGVIGRG
HEGKSLDRKGMINVLKANLEQNAFAFGSWFCEQLGALDGKTTEIANNNDEGTNKNGAFAPYWSKTKDGGIQYSTFDNDYT
AEWWKLAADSGKGAITTPYMAEGTDVPTLLTSIAYPVMSGGKMIGVGGVDISLKSLTDKLQALHPFGSGRVTLLSQTGNW
IVAPIPDLMTKQYDGEGADTVKSALSSKQPGLVRNLTYDGLDPFDRVVYPFAVPGVNATWIVLVDVPHTAINAPVQDQTT
MMIVNGLIVLGAVMLALYFAVRSLVQRPLGGLVASVEALGDGKYDEPVAAQDRTDEIGSVAKALEGFRFTLADSRRLEDE
AARERQAAETERGRSESERQQSVSLQRHIVSIVGTGLSALSQGNLSHRITDDFPGEYGKLKQDFNAALASLEETINTMNL
SVANIGLGTGEISNSASDLAKRTEQQAASLEETAAALNELTAQVDSSADNARTAADNVNLACQDAEKSGEVVQKAIASMQ
GIEQSSTEVSRIISVIDEIAFQTNLLALNAGVEAARAGEAGKGFAVVAQEVRELAQRSANAAKEIKTLINTSAVQVKEGV
DLVGRAGGTLHKIAEQVMSINDLIRQISASASEQAVGLKEINQAMNQMDQVTQQNAAMVEEATAASVALNDEAQTLKALA
TRFRVAGSSNAAALTSVAQQMRAPTASAASPHATPAVRRAAAPSRGSAAVAQDSWEEF

Sequences:

>Translated_778_residues
MSIFRMKSLAAKLIVITGIAIALVLVVSNFFLIGQTRDRVQTLTMDQANLEAKAIANEIAANVGELASAARTMSGVIGRG
HEGKSLDRKGMINVLKANLEQNAFAFGSWFCEQLGALDGKTTEIANNNDEGTNKNGAFAPYWSKTKDGGIQYSTFDNDYT
AEWWKLAADSGKGAITTPYMAEGTDVPTLLTSIAYPVMSGGKMIGVGGVDISLKSLTDKLQALHPFGSGRVTLLSQTGNW
IVAPIPDLMTKQYDGEGADTVKSALSSKQPGLVRNLTYDGLDPFDRVVYPFAVPGVNATWIVLVDVPHTAINAPVQDQTT
MMIVNGLIVLGAVMLALYFAVRSLVQRPLGGLVASVEALGDGKYDEPVAAQDRTDEIGSVAKALEGFRFTLADSRRLEDE
AARERQAAETERGRSESERQQSVSLQRHIVSIVGTGLSALSQGNLSHRITDDFPGEYGKLKQDFNAALASLEETINTMNL
SVANIGLGTGEISNSASDLAKRTEQQAASLEETAAALNELTAQVDSSADNARTAADNVNLACQDAEKSGEVVQKAIASMQ
GIEQSSTEVSRIISVIDEIAFQTNLLALNAGVEAARAGEAGKGFAVVAQEVRELAQRSANAAKEIKTLINTSAVQVKEGV
DLVGRAGGTLHKIAEQVMSINDLIRQISASASEQAVGLKEINQAMNQMDQVTQQNAAMVEEATAASVALNDEAQTLKALA
TRFRVAGSSNAAALTSVAQQMRAPTASAASPHATPAVRRAAAPSRGSAAVAQDSWEEF
>Mature_777_residues
SIFRMKSLAAKLIVITGIAIALVLVVSNFFLIGQTRDRVQTLTMDQANLEAKAIANEIAANVGELASAARTMSGVIGRGH
EGKSLDRKGMINVLKANLEQNAFAFGSWFCEQLGALDGKTTEIANNNDEGTNKNGAFAPYWSKTKDGGIQYSTFDNDYTA
EWWKLAADSGKGAITTPYMAEGTDVPTLLTSIAYPVMSGGKMIGVGGVDISLKSLTDKLQALHPFGSGRVTLLSQTGNWI
VAPIPDLMTKQYDGEGADTVKSALSSKQPGLVRNLTYDGLDPFDRVVYPFAVPGVNATWIVLVDVPHTAINAPVQDQTTM
MIVNGLIVLGAVMLALYFAVRSLVQRPLGGLVASVEALGDGKYDEPVAAQDRTDEIGSVAKALEGFRFTLADSRRLEDEA
ARERQAAETERGRSESERQQSVSLQRHIVSIVGTGLSALSQGNLSHRITDDFPGEYGKLKQDFNAALASLEETINTMNLS
VANIGLGTGEISNSASDLAKRTEQQAASLEETAAALNELTAQVDSSADNARTAADNVNLACQDAEKSGEVVQKAIASMQG
IEQSSTEVSRIISVIDEIAFQTNLLALNAGVEAARAGEAGKGFAVVAQEVRELAQRSANAAKEIKTLINTSAVQVKEGVD
LVGRAGGTLHKIAEQVMSINDLIRQISASASEQAVGLKEINQAMNQMDQVTQQNAAMVEEATAASVALNDEAQTLKALAT
RFRVAGSSNAAALTSVAQQMRAPTASAASPHATPAVRRAAAPSRGSAAVAQDSWEEF

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein. Note=Localized at the flagellum-bearing pole of the swarmer cell [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=352, Percent_Identity=43.1818181818182, Blast_Score=214, Evalue=2e-56,
Organism=Escherichia coli, GI1787690, Length=299, Percent_Identity=43.4782608695652, Blast_Score=213, Evalue=3e-56,
Organism=Escherichia coli, GI1788194, Length=301, Percent_Identity=44.1860465116279, Blast_Score=209, Evalue=5e-55,
Organism=Escherichia coli, GI2367378, Length=336, Percent_Identity=43.1547619047619, Blast_Score=203, Evalue=4e-53,
Organism=Escherichia coli, GI1789453, Length=244, Percent_Identity=40.9836065573771, Blast_Score=166, Evalue=4e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 82265; Mature: 82134

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIFRMKSLAAKLIVITGIAIALVLVVSNFFLIGQTRDRVQTLTMDQANLEAKAIANEIA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHCCCHHCCHHHHHHHHHH
ANVGELASAARTMSGVIGRGHEGKSLDRKGMINVLKANLEQNAFAFGSWFCEQLGALDGK
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TTEIANNNDEGTNKNGAFAPYWSKTKDGGIQYSTFDNDYTAEWWKLAADSGKGAITTPYM
CEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCC
AEGTDVPTLLTSIAYPVMSGGKMIGVGGVDISLKSLTDKLQALHPFGSGRVTLLSQTGNW
CCCCCHHHHHHHHHHHHHCCCCEEEECCCCEEHHHHHHHHHHHCCCCCCCEEEEECCCCE
IVAPIPDLMTKQYDGEGADTVKSALSSKQPGLVRNLTYDGLDPFDRVVYPFAVPGVNATW
EEECCHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCEECCCCCEEE
IVLVDVPHTAINAPVQDQTTMMIVNGLIVLGAVMLALYFAVRSLVQRPLGGLVASVEALG
EEEEECCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DGKYDEPVAAQDRTDEIGSVAKALEGFRFTLADSRRLEDEAARERQAAETERGRSESERQ
CCCCCCCCCCCCCHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHH
QSVSLQRHIVSIVGTGLSALSQGNLSHRITDDFPGEYGKLKQDFNAALASLEETINTMNL
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCE
SVANIGLGTGEISNSASDLAKRTEQQAASLEETAAALNELTAQVDSSADNARTAADNVNL
EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCE
ACQDAEKSGEVVQKAIASMQGIEQSSTEVSRIISVIDEIAFQTNLLALNAGVEAARAGEA
EECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHCCCC
GKGFAVVAQEVRELAQRSANAAKEIKTLINTSAVQVKEGVDLVGRAGGTLHKIAEQVMSI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHH
NDLIRQISASASEQAVGLKEINQAMNQMDQVTQQNAAMVEEATAASVALNDEAQTLKALA
HHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHH
TRFRVAGSSNAAALTSVAQQMRAPTASAASPHATPAVRRAAAPSRGSAAVAQDSWEEF
HHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHCCCCCCC
>Mature Secondary Structure 
SIFRMKSLAAKLIVITGIAIALVLVVSNFFLIGQTRDRVQTLTMDQANLEAKAIANEIA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHCCCHHCCHHHHHHHHHH
ANVGELASAARTMSGVIGRGHEGKSLDRKGMINVLKANLEQNAFAFGSWFCEQLGALDGK
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TTEIANNNDEGTNKNGAFAPYWSKTKDGGIQYSTFDNDYTAEWWKLAADSGKGAITTPYM
CEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCC
AEGTDVPTLLTSIAYPVMSGGKMIGVGGVDISLKSLTDKLQALHPFGSGRVTLLSQTGNW
CCCCCHHHHHHHHHHHHHCCCCEEEECCCCEEHHHHHHHHHHHCCCCCCCEEEEECCCCE
IVAPIPDLMTKQYDGEGADTVKSALSSKQPGLVRNLTYDGLDPFDRVVYPFAVPGVNATW
EEECCHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCEECCCCCEEE
IVLVDVPHTAINAPVQDQTTMMIVNGLIVLGAVMLALYFAVRSLVQRPLGGLVASVEALG
EEEEECCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DGKYDEPVAAQDRTDEIGSVAKALEGFRFTLADSRRLEDEAARERQAAETERGRSESERQ
CCCCCCCCCCCCCHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHH
QSVSLQRHIVSIVGTGLSALSQGNLSHRITDDFPGEYGKLKQDFNAALASLEETINTMNL
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCE
SVANIGLGTGEISNSASDLAKRTEQQAASLEETAAALNELTAQVDSSADNARTAADNVNL
EEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCE
ACQDAEKSGEVVQKAIASMQGIEQSSTEVSRIISVIDEIAFQTNLLALNAGVEAARAGEA
EECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHCCCC
GKGFAVVAQEVRELAQRSANAAKEIKTLINTSAVQVKEGVDLVGRAGGTLHKIAEQVMSI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHH
NDLIRQISASASEQAVGLKEINQAMNQMDQVTQQNAAMVEEATAASVALNDEAQTLKALA
HHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHH
TRFRVAGSSNAAALTSVAQQMRAPTASAASPHATPAVRRAAAPSRGSAAVAQDSWEEF
HHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1577276; 11259647 [H]