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The map label for this gene is tlyC [H]

Identifier: 209547628

GI number: 209547628

Start: 15148

End: 16299

Strand: Reverse

Name: tlyC [H]

Synonym: Rleg2_0016

Alternate gene names: 209547628

Gene position: 16299-15148 (Counterclockwise)

Preceding gene: 209547629

Following gene: 209547627

Centisome position: 0.36

GC content: 65.71

Gene sequence:

>1152_bases
ATGAGCGACTTTACGACGAAGCCGGCGGCAGACGCCAAGGACTCCGAGCCATCCTCCTCTTCGGACGAGGCGGGCAGTAG
TAGTCGGCCATCCGGCCGATCTCAATCCTTCTGGTCGCGCGCCGCGCGCATCCTTCGCCCGCAGCAGGGCTCGCTGCGTG
AGGATCTTGCCGACGCGCTGATGACCGATGCGGCCGGCAACGATGCTTTTTCGCCCGACGAACGGGCAATGCTGCACAAT
ATCCTGCGCTTTCGCGAGGTGCGCGTCGCCGACGTGATGGTGCCGCGCGCCGATATCGAGGCGGTCGACCAGAACATCAC
CATCGGCGAACTGATGATCCTGTTCGAGGAATCCGGCCGCTCGCGCATGCCCGTCTATGCCGACACGCTCGACGATCCGC
GCGGCATGGTGCATATCCGCGATCTGCTCTCCTATGTCGCCAAGCAGGCGCGCAACAAGCGCCGCGGCCCGACGAAACCG
GCCGCGGCCCTGCCGGCGCTGCCGGCAATCGAGGTTGCGCCCGAAAATATCCAGAAGACCACGCGGCCGGCCAAGCCGAA
TTTGGATCTCGCCCGCGTCGACCTGCAGAAGACGCTGACGGAAGCCGGCATCATCCGCAAGATCCTGTTCGTGCCGCCGT
CGATGCTGGCCTCCGACCTGTTGCGCCGCATGCAGGTGAACCGCACGCAGATGGCGCTTGTTATCGACGAATATGGCGGC
ACCGACGGGCTCGCTTCGCATGAGGACATCGTCGAAATGGTGGTCGGCGACATCGACGACGAACATGACGACGAAGAGGT
GATGTTCAAGCGGGTCGCCGAAGACGTCTTCATCGCCGACGCCCGCGTCGAACTGGAAGAGATCGCCGCAGCGATCGGGC
CGGATTTCGACATTAGCGAGCAGGTCGACGAGGTCGATACGCTGGGCGGCCTGATCTTCTCCGCGCTCGGCCGCATCCCG
GTGCGTGGCGAGGTCGTGCAGGCGCTGCCGGGCTTCGAATTCCACATCCTCGACGCCGATCCGCGCCGCATCAAGCGGCT
GCGCATCACCCGCAAGCGCCATGCGATCCGCCGCCGCGCCAAGGTGGATGGCGACGTCCCGCCCGGCTCCGATGCCGGCG
ACGACCGGCCGGCGGAATCGACCGCCAACTGA

Upstream 100 bases:

>100_bases
ATAGTGACGAAGCCGAAATTATGGAGGGGCTGGAGACTCGCATTTTGGCGCAGCTCGGCCTATCTGATCCCTACGAGGGT
CAAGACCTTAAAATGGAACC

Downstream 100 bases:

>100_bases
CACGACAAAGAGCCGCTTTTTTGAAAGACTGCGAATGGGTTGATTCGCGGTTTTTGATGGGAGTGCGCATGGAGCGGCTT
GCGGACAGGGTTATCCTCGT

Product: transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 382

Protein sequence:

>383_residues
MSDFTTKPAADAKDSEPSSSSDEAGSSSRPSGRSQSFWSRAARILRPQQGSLREDLADALMTDAAGNDAFSPDERAMLHN
ILRFREVRVADVMVPRADIEAVDQNITIGELMILFEESGRSRMPVYADTLDDPRGMVHIRDLLSYVAKQARNKRRGPTKP
AAALPALPAIEVAPENIQKTTRPAKPNLDLARVDLQKTLTEAGIIRKILFVPPSMLASDLLRRMQVNRTQMALVIDEYGG
TDGLASHEDIVEMVVGDIDDEHDDEEVMFKRVAEDVFIADARVELEEIAAAIGPDFDISEQVDEVDTLGGLIFSALGRIP
VRGEVVQALPGFEFHILDADPRRIKRLRITRKRHAIRRRAKVDGDVPPGSDAGDDRPAESTAN

Sequences:

>Translated_383_residues
MSDFTTKPAADAKDSEPSSSSDEAGSSSRPSGRSQSFWSRAARILRPQQGSLREDLADALMTDAAGNDAFSPDERAMLHN
ILRFREVRVADVMVPRADIEAVDQNITIGELMILFEESGRSRMPVYADTLDDPRGMVHIRDLLSYVAKQARNKRRGPTKP
AAALPALPAIEVAPENIQKTTRPAKPNLDLARVDLQKTLTEAGIIRKILFVPPSMLASDLLRRMQVNRTQMALVIDEYGG
TDGLASHEDIVEMVVGDIDDEHDDEEVMFKRVAEDVFIADARVELEEIAAAIGPDFDISEQVDEVDTLGGLIFSALGRIP
VRGEVVQALPGFEFHILDADPRRIKRLRITRKRHAIRRRAKVDGDVPPGSDAGDDRPAESTAN
>Mature_382_residues
SDFTTKPAADAKDSEPSSSSDEAGSSSRPSGRSQSFWSRAARILRPQQGSLREDLADALMTDAAGNDAFSPDERAMLHNI
LRFREVRVADVMVPRADIEAVDQNITIGELMILFEESGRSRMPVYADTLDDPRGMVHIRDLLSYVAKQARNKRRGPTKPA
AALPALPAIEVAPENIQKTTRPAKPNLDLARVDLQKTLTEAGIIRKILFVPPSMLASDLLRRMQVNRTQMALVIDEYGGT
DGLASHEDIVEMVVGDIDDEHDDEEVMFKRVAEDVFIADARVELEEIAAAIGPDFDISEQVDEVDTLGGLIFSALGRIPV
RGEVVQALPGFEFHILDADPRRIKRLRITRKRHAIRRRAKVDGDVPPGSDAGDDRPAESTAN

Specific function: Unknown

COG id: COG1253

COG function: function code R; Hemolysins and related proteins containing CBS domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=268, Percent_Identity=25.7462686567164, Blast_Score=89, Evalue=7e-18,
Organism=Escherichia coli, GI1786879, Length=330, Percent_Identity=26.6666666666667, Blast_Score=118, Evalue=8e-28,
Organism=Escherichia coli, GI145693175, Length=280, Percent_Identity=26.4285714285714, Blast_Score=73, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC [H]

EC number: NA

Molecular weight: Translated: 42178; Mature: 42047

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDFTTKPAADAKDSEPSSSSDEAGSSSRPSGRSQSFWSRAARILRPQQGSLREDLADAL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH
MTDAAGNDAFSPDERAMLHNILRFREVRVADVMVPRADIEAVDQNITIGELMILFEESGR
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHEEEEEECCCC
SRMPVYADTLDDPRGMVHIRDLLSYVAKQARNKRRGPTKPAAALPALPAIEVAPENIQKT
CCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHCCCHHHHHH
TRPAKPNLDLARVDLQKTLTEAGIIRKILFVPPSMLASDLLRRMQVNRTQMALVIDEYGG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHEEEEEECCCC
TDGLASHEDIVEMVVGDIDDEHDDEEVMFKRVAEDVFIADARVELEEIAAAIGPDFDISE
CCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
QVDEVDTLGGLIFSALGRIPVRGEVVQALPGFEFHILDADPRRIKRLRITRKRHAIRRRA
HHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHH
KVDGDVPPGSDAGDDRPAESTAN
HCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SDFTTKPAADAKDSEPSSSSDEAGSSSRPSGRSQSFWSRAARILRPQQGSLREDLADAL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH
MTDAAGNDAFSPDERAMLHNILRFREVRVADVMVPRADIEAVDQNITIGELMILFEESGR
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHEEEEEECCCC
SRMPVYADTLDDPRGMVHIRDLLSYVAKQARNKRRGPTKPAAALPALPAIEVAPENIQKT
CCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHCCCHHHHHH
TRPAKPNLDLARVDLQKTLTEAGIIRKILFVPPSMLASDLLRRMQVNRTQMALVIDEYGG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHEEEEEECCCC
TDGLASHEDIVEMVVGDIDDEHDDEEVMFKRVAEDVFIADARVELEEIAAAIGPDFDISE
CCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
QVDEVDTLGGLIFSALGRIPVRGEVVQALPGFEFHILDADPRRIKRLRITRKRHAIRRRA
HHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHH
KVDGDVPPGSDAGDDRPAESTAN
HCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA