| Definition | Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete genome. |
|---|---|
| Accession | NC_011369 |
| Length | 4,537,948 |
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The map label for this gene is metK [H]
Identifier: 209547625
GI number: 209547625
Start: 11490
End: 12728
Strand: Reverse
Name: metK [H]
Synonym: Rleg2_0013
Alternate gene names: 209547625
Gene position: 12728-11490 (Counterclockwise)
Preceding gene: 209547626
Following gene: 209547624
Centisome position: 0.28
GC content: 63.2
Gene sequence:
>1239_bases ATGCGCGCGAATTATCTCTTTACCAGCGAATCTGTTGCCGAAGGTCATCCTGACAAGGTCTGCGACCGCATCTCCGACGA GATCGTCGATCTGGTCTACCGCGAAGCGGCCAAAACAGGCGTCAATCCGTGGGGCGTGCGCATTGCCTGCGAAACGCTGG CGACCACCAACCGCGTCGTCATCGCCGGCGAAGTCCGCCTGCCGCCGAGCCTGATGAAGAAGGACAAGGACGGCAAGGAC GTCATCAATCCGTCGAAGTTCAAGGCCGCCGCCCGCCGCGCCATCAAGGATATCGGTTATGAGCAGGACGGCTTCCACTG GAAGAAGGCCAAGATCGACGTGCTCCTGCACTCGCAGTCGGCCGACATCGCGCAGGGCGTCGACAGTGCTGCCGACCAGC AGGGCGACGAAGGCGCCGGCGACCAGGGCATCATGTTCGGTTACGCCTGCCGCGAAACGCCGGATCTGATGCCGGCGCCG ATCTATTATTCCCACAAGATCCTGCAGCTGCTCGCGGTTGCCCGCAAGAAGGGTGACGGCGAAGTCGCCAAGCTCGGCCC CGACGCCAAGAGCCAGGTGACCGTGCGCTACGTCGACGGCAAGCCGTCCGAAGCGACGTCGATCGTGCTTTCGACCCAGC ATCTCGACGAAAGCTGGGATTCGAAGAAGGTCCGCGCCGTCGTCGAGCCCTATATCCGCGAAGCGCTCGGCGAACTGAAG ATCGCTGACGATTGCAAGTGGTACATCAACCCGACCGGCAAGTTCGTCATCGGCGGACCGGACGGCGATGCGGGCCTCAC CGGCCGCAAGATCATCGTCGACACCTACGGCGGTGCCGCTCCGCATGGCGGCGGCGCATTCTCCGGCAAGGACACGACGA AGGTCGACCGTTCGGCTGCCTATGCCGCCCGCTATCTGGCGAAAAACGTCGTTGCTGCCGGCCTTGCCGACCGCTGCACG ATCCAGATTTCCTACGCGATCGGCGTCGCCCAGCCGCTGTCGATCTATGTCGACCTGCACGGCACCGGCAAGGTCAGCGA AGATCAGGTCGAAGCGGCTATCCGCAAGAACATGGACCTGTCTCCGTCGGGCATCCGCCGCCATCTCGACCTCAACAAGC CGATCTATGCGAAGACCTCCGCTTATGGCCATTTCGGCCGCAAGGCCGGTCGCGACGGCTCGTTCTCCTGGGAGCGCACG GACCTCGTCAAGGCGCTCAAGGAAAGCGTGAAGGCCTGA
Upstream 100 bases:
>100_bases CCGCAGATATAAAGATATATTTATGTCCTTCTGCGCTTGTCATCGGGCCTCGAACTGAGTACCTACTAGCTAGCTTTTAT TCTTTGAGGGGAATCCCGGA
Downstream 100 bases:
>100_bases GATAAAGCATGACGGATATGGAACGCCGCGGCCGGGCGACTGAAGCCTTCTTCGGTCGCCGCAAGGGCAAGGCCCTGCGC GAACACCAGGCCGAGACGCT
Product: S-adenosylmethionine synthetase
Products: NA
Alternate protein names: AdoMet synthase; MAT; Methionine adenosyltransferase [H]
Number of amino acids: Translated: 412; Mature: 412
Protein sequence:
>412_residues MRANYLFTSESVAEGHPDKVCDRISDEIVDLVYREAAKTGVNPWGVRIACETLATTNRVVIAGEVRLPPSLMKKDKDGKD VINPSKFKAAARRAIKDIGYEQDGFHWKKAKIDVLLHSQSADIAQGVDSAADQQGDEGAGDQGIMFGYACRETPDLMPAP IYYSHKILQLLAVARKKGDGEVAKLGPDAKSQVTVRYVDGKPSEATSIVLSTQHLDESWDSKKVRAVVEPYIREALGELK IADDCKWYINPTGKFVIGGPDGDAGLTGRKIIVDTYGGAAPHGGGAFSGKDTTKVDRSAAYAARYLAKNVVAAGLADRCT IQISYAIGVAQPLSIYVDLHGTGKVSEDQVEAAIRKNMDLSPSGIRRHLDLNKPIYAKTSAYGHFGRKAGRDGSFSWERT DLVKALKESVKA
Sequences:
>Translated_412_residues MRANYLFTSESVAEGHPDKVCDRISDEIVDLVYREAAKTGVNPWGVRIACETLATTNRVVIAGEVRLPPSLMKKDKDGKD VINPSKFKAAARRAIKDIGYEQDGFHWKKAKIDVLLHSQSADIAQGVDSAADQQGDEGAGDQGIMFGYACRETPDLMPAP IYYSHKILQLLAVARKKGDGEVAKLGPDAKSQVTVRYVDGKPSEATSIVLSTQHLDESWDSKKVRAVVEPYIREALGELK IADDCKWYINPTGKFVIGGPDGDAGLTGRKIIVDTYGGAAPHGGGAFSGKDTTKVDRSAAYAARYLAKNVVAAGLADRCT IQISYAIGVAQPLSIYVDLHGTGKVSEDQVEAAIRKNMDLSPSGIRRHLDLNKPIYAKTSAYGHFGRKAGRDGSFSWERT DLVKALKESVKA >Mature_412_residues MRANYLFTSESVAEGHPDKVCDRISDEIVDLVYREAAKTGVNPWGVRIACETLATTNRVVIAGEVRLPPSLMKKDKDGKD VINPSKFKAAARRAIKDIGYEQDGFHWKKAKIDVLLHSQSADIAQGVDSAADQQGDEGAGDQGIMFGYACRETPDLMPAP IYYSHKILQLLAVARKKGDGEVAKLGPDAKSQVTVRYVDGKPSEATSIVLSTQHLDESWDSKKVRAVVEPYIREALGELK IADDCKWYINPTGKFVIGGPDGDAGLTGRKIIVDTYGGAAPHGGGAFSGKDTTKVDRSAAYAARYLAKNVVAAGLADRCT IQISYAIGVAQPLSIYVDLHGTGKVSEDQVEAAIRKNMDLSPSGIRRHLDLNKPIYAKTSAYGHFGRKAGRDGSFSWERT DLVKALKESVKA
Specific function: Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the e
COG id: COG0192
COG function: function code H; S-adenosylmethionine synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AdoMet synthase family [H]
Homologues:
Organism=Homo sapiens, GI5174529, Length=401, Percent_Identity=46.3840399002494, Blast_Score=313, Evalue=3e-85, Organism=Homo sapiens, GI4557737, Length=400, Percent_Identity=46, Blast_Score=305, Evalue=5e-83, Organism=Escherichia coli, GI1789311, Length=409, Percent_Identity=49.1442542787286, Blast_Score=362, Evalue=1e-101, Organism=Caenorhabditis elegans, GI17538498, Length=402, Percent_Identity=45.273631840796, Blast_Score=300, Evalue=1e-81, Organism=Caenorhabditis elegans, GI17538494, Length=402, Percent_Identity=45.0248756218905, Blast_Score=296, Evalue=1e-80, Organism=Caenorhabditis elegans, GI25145633, Length=404, Percent_Identity=43.8118811881188, Blast_Score=291, Evalue=6e-79, Organism=Caenorhabditis elegans, GI17551082, Length=415, Percent_Identity=42.6506024096386, Blast_Score=290, Evalue=9e-79, Organism=Caenorhabditis elegans, GI32565911, Length=320, Percent_Identity=47.5, Blast_Score=254, Evalue=8e-68, Organism=Caenorhabditis elegans, GI25145635, Length=319, Percent_Identity=46.0815047021944, Blast_Score=244, Evalue=5e-65, Organism=Caenorhabditis elegans, GI32565905, Length=329, Percent_Identity=45.8966565349544, Blast_Score=240, Evalue=1e-63, Organism=Caenorhabditis elegans, GI32565903, Length=303, Percent_Identity=47.8547854785479, Blast_Score=239, Evalue=2e-63, Organism=Saccharomyces cerevisiae, GI6323209, Length=411, Percent_Identity=45.4987834549878, Blast_Score=313, Evalue=2e-86, Organism=Saccharomyces cerevisiae, GI6320710, Length=402, Percent_Identity=44.5273631840796, Blast_Score=311, Evalue=2e-85, Organism=Drosophila melanogaster, GI24580527, Length=404, Percent_Identity=45.2970297029703, Blast_Score=295, Evalue=5e-80, Organism=Drosophila melanogaster, GI24580525, Length=404, Percent_Identity=45.2970297029703, Blast_Score=295, Evalue=5e-80, Organism=Drosophila melanogaster, GI45552159, Length=404, Percent_Identity=44.8019801980198, Blast_Score=287, Evalue=8e-78, Organism=Drosophila melanogaster, GI24580529, Length=404, Percent_Identity=44.8019801980198, Blast_Score=287, Evalue=8e-78, Organism=Drosophila melanogaster, GI24580537, Length=404, Percent_Identity=44.8019801980198, Blast_Score=287, Evalue=8e-78, Organism=Drosophila melanogaster, GI24580533, Length=404, Percent_Identity=44.8019801980198, Blast_Score=287, Evalue=8e-78, Organism=Drosophila melanogaster, GI24580535, Length=404, Percent_Identity=44.8019801980198, Blast_Score=287, Evalue=8e-78, Organism=Drosophila melanogaster, GI24580531, Length=404, Percent_Identity=44.8019801980198, Blast_Score=287, Evalue=8e-78, Organism=Drosophila melanogaster, GI24580541, Length=388, Percent_Identity=44.3298969072165, Blast_Score=269, Evalue=3e-72, Organism=Drosophila melanogaster, GI24580539, Length=142, Percent_Identity=36.6197183098592, Blast_Score=87, Evalue=2e-17,
Paralogues:
None
Copy number: 7,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022631 - InterPro: IPR022630 - InterPro: IPR022629 - InterPro: IPR022628 - InterPro: IPR002133 - InterPro: IPR022636 [H]
Pfam domain/function: PF02773 S-AdoMet_synt_C; PF02772 S-AdoMet_synt_M; PF00438 S-AdoMet_synt_N [H]
EC number: =2.5.1.6 [H]
Molecular weight: Translated: 44582; Mature: 44582
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: PS00376 ADOMET_SYNTHETASE_1 ; PS00377 ADOMET_SYNTHETASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRANYLFTSESVAEGHPDKVCDRISDEIVDLVYREAAKTGVNPWGVRIACETLATTNRVV CCCCEEECCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEE IAGEVRLPPSLMKKDKDGKDVINPSKFKAAARRAIKDIGYEQDGFHWKKAKIDVLLHSQS EEECCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCC ADIAQGVDSAADQQGDEGAGDQGIMFGYACRETPDLMPAPIYYSHKILQLLAVARKKGDG CHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC EVAKLGPDAKSQVTVRYVDGKPSEATSIVLSTQHLDESWDSKKVRAVVEPYIREALGELK CEEECCCCCCCEEEEEEECCCCCCCEEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHCCE IADDCKWYINPTGKFVIGGPDGDAGLTGRKIIVDTYGGAAPHGGGAFSGKDTTKVDRSAA ECCCCEEEECCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHH YAARYLAKNVVAAGLADRCTIQISYAIGVAQPLSIYVDLHGTGKVSEDQVEAAIRKNMDL HHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCC SPSGIRRHLDLNKPIYAKTSAYGHFGRKAGRDGSFSWERTDLVKALKESVKA CHHHHHHHCCCCCCEEEECCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MRANYLFTSESVAEGHPDKVCDRISDEIVDLVYREAAKTGVNPWGVRIACETLATTNRVV CCCCEEECCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEE IAGEVRLPPSLMKKDKDGKDVINPSKFKAAARRAIKDIGYEQDGFHWKKAKIDVLLHSQS EEECCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCC ADIAQGVDSAADQQGDEGAGDQGIMFGYACRETPDLMPAPIYYSHKILQLLAVARKKGDG CHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC EVAKLGPDAKSQVTVRYVDGKPSEATSIVLSTQHLDESWDSKKVRAVVEPYIREALGELK CEEECCCCCCCEEEEEEECCCCCCCEEEEEEHHHHCCCCCHHHHHHHHHHHHHHHHHCCE IADDCKWYINPTGKFVIGGPDGDAGLTGRKIIVDTYGGAAPHGGGAFSGKDTTKVDRSAA ECCCCEEEECCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHH YAARYLAKNVVAAGLADRCTIQISYAIGVAQPLSIYVDLHGTGKVSEDQVEAAIRKNMDL HHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCC SPSGIRRHLDLNKPIYAKTSAYGHFGRKAGRDGSFSWERTDLVKALKESVKA CHHHHHHHCCCCCCEEEECCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA