| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
Click here to switch to the map view.
The map label for this gene is 209400917
Identifier: 209400917
GI number: 209400917
Start: 2664875
End: 2665750
Strand: Reverse
Name: 209400917
Synonym: ECH74115_2869
Alternate gene names: NA
Gene position: 2665750-2664875 (Counterclockwise)
Preceding gene: 209397490
Following gene: 209397891
Centisome position: 47.84
GC content: 38.81
Gene sequence:
>876_bases ATGTTTTGCATAAGAACCCTACTACCTATTAGCGCCAGCGTATCAGTTCCGACAAAACAATCTCAATCCATCCCAATAAC TTTAGCAGGGAGAACAATCGAAAAAGCGCAAGAGAAAGAAGGATTACTTGTTTTTTTAGGAATGAAATCCGTTAATGACT ATACTCTTAATATTCTTGGCCAAAATGTTTCAAGAGTCACAACGGGGAAAAAACCGTATGATTTATTATTCCTGAATGAT GCTACAAAACAAGATTTTGATAAAAGGAAAATGGAGTTTACATATCCTGGAGCAAATAAAAGCCATCTACAATCAAGTAA TAGCGATGTTGTTGCTGCTGCAGCTATAAGTATTACAGCGACAGAGATGAAAACCATCCTGCCAGATGATTTAACACTAG GAAAATACAACAAAATTTATCTGTCTGGGCATGGTTCTGCTGGTCTACCTCTTCTTAAGTGCGGAGATGAATTTTTATCA CCGTCAGATATTGTCGACCGCATTGTTCAGCATAATCTTCATGAAATAGATGATATCAGATTAACATCCTGTAACTCAGC CAACATAATAAAAAACAAAGACTTCTCTCCTGATGAAATAGAAAAATCCGCAAATATGAATAACGGCTGGTTGGCCAGGG CATTATTTGGTCAAAAGAGGTCTTTAGCAGAACACGTCTATGCCGAGTTTGAACGTCGCGGAATTAACGTTTCTATATCA GGTTACCATGGCACTGGCGTTTTTTATGTACCAGAGCATGGTAAACCAACAACGCATCTACGCTCCACAACTGTGCCTGC AACACCTGAACATACTGTAAGAAGAAGCGACTACAGAGCCACTTTGGGTAGAACTCAACCCATAGATATTGAGTAA
Upstream 100 bases:
>100_bases GTTGTCATGTCCGGTGGATGTTTGTTAGGAATGTTCAGACAGGTTTATTTTGAATTTACACAGAATCCTAAACAGGTTCG AAAATTAAGAAAGAGGTTGT
Downstream 100 bases:
>100_bases TTGAGCCAGCATATACACTTGATGGTTAGGAAACAGAATCATTGTTTTAAACATTTCCTGGCCATTAATATTGTCGGCGG GAGCATATCCAGGACTGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: T3SS Effector Protein EspS; T3SS Secreted Effector OspB-Homolog; OspB Protein
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MFCIRTLLPISASVSVPTKQSQSIPITLAGRTIEKAQEKEGLLVFLGMKSVNDYTLNILGQNVSRVTTGKKPYDLLFLND ATKQDFDKRKMEFTYPGANKSHLQSSNSDVVAAAAISITATEMKTILPDDLTLGKYNKIYLSGHGSAGLPLLKCGDEFLS PSDIVDRIVQHNLHEIDDIRLTSCNSANIIKNKDFSPDEIEKSANMNNGWLARALFGQKRSLAEHVYAEFERRGINVSIS GYHGTGVFYVPEHGKPTTHLRSTTVPATPEHTVRRSDYRATLGRTQPIDIE
Sequences:
>Translated_291_residues MFCIRTLLPISASVSVPTKQSQSIPITLAGRTIEKAQEKEGLLVFLGMKSVNDYTLNILGQNVSRVTTGKKPYDLLFLND ATKQDFDKRKMEFTYPGANKSHLQSSNSDVVAAAAISITATEMKTILPDDLTLGKYNKIYLSGHGSAGLPLLKCGDEFLS PSDIVDRIVQHNLHEIDDIRLTSCNSANIIKNKDFSPDEIEKSANMNNGWLARALFGQKRSLAEHVYAEFERRGINVSIS GYHGTGVFYVPEHGKPTTHLRSTTVPATPEHTVRRSDYRATLGRTQPIDIE >Mature_291_residues MFCIRTLLPISASVSVPTKQSQSIPITLAGRTIEKAQEKEGLLVFLGMKSVNDYTLNILGQNVSRVTTGKKPYDLLFLND ATKQDFDKRKMEFTYPGANKSHLQSSNSDVVAAAAISITATEMKTILPDDLTLGKYNKIYLSGHGSAGLPLLKCGDEFLS PSDIVDRIVQHNLHEIDDIRLTSCNSANIIKNKDFSPDEIEKSANMNNGWLARALFGQKRSLAEHVYAEFERRGINVSIS GYHGTGVFYVPEHGKPTTHLRSTTVPATPEHTVRRSDYRATLGRTQPIDIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32195; Mature: 32195
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFCIRTLLPISASVSVPTKQSQSIPITLAGRTIEKAQEKEGLLVFLGMKSVNDYTLNILG CEEEHHHCCCCCEEECCCCCCCCCCEEEECCHHHHHHCCCCEEEEEECCCCCCEEEEEEC QNVSRVTTGKKPYDLLFLNDATKQDFDKRKMEFTYPGANKSHLQSSNSDVVAAAAISITA CCHHHHCCCCCCEEEEEECCCCHHHHHHCCEEEECCCCCHHHHCCCCCCEEEEEEEEEEH TEMKTILPDDLTLGKYNKIYLSGHGSAGLPLLKCGDEFLSPSDIVDRIVQHNLHEIDDIR HHHHHHCCCCCCCCCCEEEEEECCCCCCCCCEECCHHHCCHHHHHHHHHHCCCHHCCCEE LTSCNSANIIKNKDFSPDEIEKSANMNNGWLARALFGQKRSLAEHVYAEFERRGINVSIS EECCCCCCCEECCCCCHHHHHHHCCCCCCEEHHHHHCCHHHHHHHHHHHHHHCCCEEEEE GYHGTGVFYVPEHGKPTTHLRSTTVPATPEHTVRRSDYRATLGRTQPIDIE CEECCEEEEECCCCCCCCEEECCCCCCCCCHHHHCCCHHHHCCCCCCCCCC >Mature Secondary Structure MFCIRTLLPISASVSVPTKQSQSIPITLAGRTIEKAQEKEGLLVFLGMKSVNDYTLNILG CEEEHHHCCCCCEEECCCCCCCCCCEEEECCHHHHHHCCCCEEEEEECCCCCCEEEEEEC QNVSRVTTGKKPYDLLFLNDATKQDFDKRKMEFTYPGANKSHLQSSNSDVVAAAAISITA CCHHHHCCCCCCEEEEEECCCCHHHHHHCCEEEECCCCCHHHHCCCCCCEEEEEEEEEEH TEMKTILPDDLTLGKYNKIYLSGHGSAGLPLLKCGDEFLSPSDIVDRIVQHNLHEIDDIR HHHHHHCCCCCCCCCCEEEEEECCCCCCCCCEECCHHHCCHHHHHHHHHHCCCHHCCCEE LTSCNSANIIKNKDFSPDEIEKSANMNNGWLARALFGQKRSLAEHVYAEFERRGINVSIS EECCCCCCCEECCCCCHHHHHHHCCCCCCEEHHHHHCCHHHHHHHHHHHHHHCCCEEEEE GYHGTGVFYVPEHGKPTTHLRSTTVPATPEHTVRRSDYRATLGRTQPIDIE CEECCEEEEECCCCCCCCEEECCCCCCCCCHHHHCCCHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA