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The map label for this gene is sfmA [C]

Identifier: 209400508

GI number: 209400508

Start: 4807077

End: 4807679

Strand: Reverse

Name: sfmA [C]

Synonym: ECH74115_5164

Alternate gene names: 209400508

Gene position: 4807679-4807077 (Counterclockwise)

Preceding gene: 209397586

Following gene: 209397496

Centisome position: 86.28

GC content: 44.94

Gene sequence:

>603_bases
ATGAAACCAAATATGATTGTAGGAGCATTAGCGTTAACTTCTGTGTTTATGGCAGGTCACCTACAGGCGGCTGATGGAAC
AGTCCATTTCCGTGGTGAAATTATTGACAGTACTTGCGAAGTCACTCCTGAAACTAAAGATCAGGTCGTTGATTTAGGCA
AAGTAAACCGTACAGCCTTTAGTGGCGTCGATGATGTGGCTGCCCCGACGGCTTTTTCTATCGATCTGACTCAATGCCCG
GAAACCTTTAAGTCCGCCGCAATTCGTTTCGATGGTAATGAAGATGCTCATGGTAATGGCAACCTGGCAATTGGTACCCC
GCTGGATAACTCTAACGATGCTGCCGCTGGTATTAGCCCGAGTGATAACAGTGGGGATTATACTGGTGCGGGTGCCGTTA
GTGCAGCGAAAGGCGTAGCTATTCGTTTATATAACCGTGCAGATAACACTCAGGTCAAGTTATATGAAAATTCTGCATCA
ACTCCGATTTCTAATGGTAATGCATCCATGAAGTTCATGGCTCGTTATATTGCTACGGAAACGACTATTGACCCTGGTAC
AGCTAACGCCGACTCGCAGTTTACAGTTGAATATATAAAATAA

Upstream 100 bases:

>100_bases
GTAGTACTATTTGGTTTCTGATCAAATACCGATCAGGTTTATCCAAATTTAATAAATGGATAACACACAGGAATAATATC
AAATTAATGGAGTTATATTT

Downstream 100 bases:

>100_bases
ATCATTCTTAACATAATACCTTAAATAAAATGGCGCTCGCCATTATGGTTCTCTTTTACTTAAATGAAGGGCGTCATTAT
TATATTTTTTATGAGATACA

Product: fimbrial protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MKPNMIVGALALTSVFMAGHLQAADGTVHFRGEIIDSTCEVTPETKDQVVDLGKVNRTAFSGVDDVAAPTAFSIDLTQCP
ETFKSAAIRFDGNEDAHGNGNLAIGTPLDNSNDAAAGISPSDNSGDYTGAGAVSAAKGVAIRLYNRADNTQVKLYENSAS
TPISNGNASMKFMARYIATETTIDPGTANADSQFTVEYIK

Sequences:

>Translated_200_residues
MKPNMIVGALALTSVFMAGHLQAADGTVHFRGEIIDSTCEVTPETKDQVVDLGKVNRTAFSGVDDVAAPTAFSIDLTQCP
ETFKSAAIRFDGNEDAHGNGNLAIGTPLDNSNDAAAGISPSDNSGDYTGAGAVSAAKGVAIRLYNRADNTQVKLYENSAS
TPISNGNASMKFMARYIATETTIDPGTANADSQFTVEYIK
>Mature_200_residues
MKPNMIVGALALTSVFMAGHLQAADGTVHFRGEIIDSTCEVTPETKDQVVDLGKVNRTAFSGVDDVAAPTAFSIDLTQCP
ETFKSAAIRFDGNEDAHGNGNLAIGTPLDNSNDAAAGISPSDNSGDYTGAGAVSAAKGVAIRLYNRADNTQVKLYENSAS
TPISNGNASMKFMARYIATETTIDPGTANADSQFTVEYIK

Specific function: Fimbriae (Also Called Pili), Polar Filaments Radiating From The Surface Of The Bacterium To A Length Of 0.5-1.5 Micrometers And Numbering 100-300 Per Cell, Enable Bacteria To Colonize The Epithelium Of Specific Host Organs (By Similarity). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

Organism=Escherichia coli, GI87081753, Length=176, Percent_Identity=31.25, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1790773, Length=201, Percent_Identity=28.8557213930348, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1786746, Length=172, Percent_Identity=29.0697674418605, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 20888; Mature: 20888

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPNMIVGALALTSVFMAGHLQAADGTVHFRGEIIDSTCEVTPETKDQVVDLGKVNRTAF
CCCCEEEHHHHHHHHHHHCCEEECCCEEEEEEEEECCEECCCCCCHHHEECCCCCCCHHH
SGVDDVAAPTAFSIDLTQCPETFKSAAIRFDGNEDAHGNGNLAIGTPLDNSNDAAAGISP
CCCCCCCCCCEEEEEHHHCCHHHHHEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCC
SDNSGDYTGAGAVSAAKGVAIRLYNRADNTQVKLYENSASTPISNGNASMKFMARYIATE
CCCCCCCCCCCCCHHCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHC
TTIDPGTANADSQFTVEYIK
CCCCCCCCCCCCEEEEEEEC
>Mature Secondary Structure
MKPNMIVGALALTSVFMAGHLQAADGTVHFRGEIIDSTCEVTPETKDQVVDLGKVNRTAF
CCCCEEEHHHHHHHHHHHCCEEECCCEEEEEEEEECCEECCCCCCHHHEECCCCCCCHHH
SGVDDVAAPTAFSIDLTQCPETFKSAAIRFDGNEDAHGNGNLAIGTPLDNSNDAAAGISP
CCCCCCCCCCEEEEEHHHCCHHHHHEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCC
SDNSGDYTGAGAVSAAKGVAIRLYNRADNTQVKLYENSASTPISNGNASMKFMARYIATE
CCCCCCCCCCCCCHHCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHC
TTIDPGTANADSQFTVEYIK
CCCCCCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2890624 [H]