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The map label for this gene is sfmF

Identifier: 209400190

GI number: 209400190

Start: 659383

End: 659580

Strand: Direct

Name: sfmF

Synonym: ECH74115_0635

Alternate gene names: 209400190

Gene position: 659383-659580 (Clockwise)

Preceding gene: 209395712

Following gene: 209398706

Centisome position: 11.83

GC content: 49.49

Gene sequence:

>198_bases
ATGGCACAAACCGTCGCCATCGAATTACGTAATAGCGATCGCTCCCGGCTCGCACTGGGGGAGGCGAGCCCGACTGAGGA
AGTAGATGCAAATGGCAATGTCACACTAAACTTTTTTGCCAATTATCGAGCGTTAGCCAGCGGTGTTCGGCCAGGTGTGG
CGAAAGCGGATGCGATATTTATGATCAATTATAATTAA

Upstream 100 bases:

>100_bases
TAGCCTGCGGCTGGAGGGATGTCCTCCGGGTTCAGTTGCGATTTTATTTACGGGAACGCCGGCATCTGATGCCAACCTGC
TGGCTCTGGATGATCCCGCA

Downstream 100 bases:

>100_bases
TATTATATTAATTCGTATAATTTGGCGTAGTCGATAAGCTCTACAATTGAATGCAAACCTAGCTTGCCATAAATATTAGA
TTTATGCGCACTAACTGTTT

Product: fimbrial protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 65; Mature: 64

Protein sequence:

>65_residues
MAQTVAIELRNSDRSRLALGEASPTEEVDANGNVTLNFFANYRALASGVRPGVAKADAIFMINYN

Sequences:

>Translated_65_residues
MAQTVAIELRNSDRSRLALGEASPTEEVDANGNVTLNFFANYRALASGVRPGVAKADAIFMINYN
>Mature_64_residues
AQTVAIELRNSDRSRLALGEASPTEEVDANGNVTLNFFANYRALASGVRPGVAKADAIFMINYN

Specific function: Unknown

COG id: COG3539

COG function: function code NU; P pilus assembly protein, pilin FimA

Gene ontology:

Cell location: Fimbrium

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family

Homologues:

Organism=Escherichia coli, GI1786746, Length=65, Percent_Identity=100, Blast_Score=132, Evalue=4e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SFMF_ECOLI (P38052)

Other databases:

- EMBL:   U82598
- EMBL:   U00096
- EMBL:   AP009048
- EMBL:   X51662
- PIR:   E64785
- RefSeq:   AP_001181.1
- RefSeq:   NP_415067.1
- ProteinModelPortal:   P38052
- SMR:   P38052
- STRING:   P38052
- EnsemblBacteria:   EBESCT00000000520
- EnsemblBacteria:   EBESCT00000014760
- GeneID:   944977
- GenomeReviews:   AP009048_GR
- GenomeReviews:   U00096_GR
- KEGG:   ecj:JW5072
- KEGG:   eco:b0534
- EchoBASE:   EB2289
- EcoGene:   EG12388
- eggNOG:   COG3539
- GeneTree:   EBGT00050000008613
- HOGENOM:   HBG701898
- OMA:   DATFMIN
- ProtClustDB:   PRK09934
- BioCyc:   EcoCyc:EG12388-MONOMER
- Genevestigator:   P38052
- GO:   GO:0009289
- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779
- Gene3D:   G3DSA:2.60.40.1090

Pfam domain/function: PF00419 Fimbrial; SSF49401 Adhes_bact

EC number: NA

Molecular weight: Translated: 7003; Mature: 6872

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQTVAIELRNSDRSRLALGEASPTEEVDANGNVTLNFFANYRALASGVRPGVAKADAIF
CCCEEEEEECCCCCCEEEECCCCCCCCCCCCCCEEEEEECCCHHHHCCCCCCCCCCCEEE
MINYN
EEEEC
>Mature Secondary Structure 
AQTVAIELRNSDRSRLALGEASPTEEVDANGNVTLNFFANYRALASGVRPGVAKADAIF
CCEEEEEECCCCCCEEEECCCCCCCCCCCCCCEEEEEECCCHHHHCCCCCCCCCCCEEE
MINYN
EEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 2183007; 7984428