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The map label for this gene is sfmH [H]

Identifier: 209395712

GI number: 209395712

Start: 658047

End: 659054

Strand: Direct

Name: sfmH [H]

Synonym: ECH74115_0634

Alternate gene names: 209395712

Gene position: 658047-659054 (Clockwise)

Preceding gene: 209401002

Following gene: 209400190

Centisome position: 11.81

GC content: 45.14

Gene sequence:

>1008_bases
ATGAAGATAATCTGCAGATTATTATTGGCGATGGCATGTTTGTGTCTGGCAAACATATCCTGGGCTACTGTTTGTGCAAA
TAGTACTGGCGTAGCAGAAGATGAACACTATGATCTCTCAAATGTCTTTAATAGCACCAATAACCAGCCAGGGCAGATTG
TTGTTTTACCGGAAAAATCCGGCTGGGTAGGTGTCTCAGCAATTTGTCCACCCGGCACGCTGGTGAATTATACATACCGT
AGTTATGTCACTAACTTTATTGTTCAGGAAACTATCGATAATTATAAATATATGCAATTAAATGATTATCTATTAGGTGC
GATGAGTCTGGTTGATAGTGTGATGGATATTCAATTTCCCCCGCAAAATTATATTCGTATGGGAACAGATCCTAACGTTT
CGCAAAACCTTCCGTTCGGGGTGATGGATTCTCGTTTGATATTTCGTTTAAAGGTTATTCGGCCCTTTATTAACATGGTG
GAGATCCCCAGACAGGTGATGTTTACCGTGTATGTGACATCAACGCCTTACGATCCGTTGGTTACACCTGTTTATACCAT
TAGTTTTGGTGGCCGGGTTGAAGTACCGCAAAACTGCGAATTAAATGCCGGGCAGATTGTTGAATTTGATTTTGGTGATA
TCGGCGCATCGTTATTTAGTGCGGCAGGGCCGGGTAATCGGCCTGCTGGTGTCATGCCGCAAACCAAGAGCATTGCGGTC
AAATGTACGAATGTTGCTGCGCAGGCTTATTTAACAATGCGTCTGGAAGCCAGTGCCGTTTCTGGTCAGGCGATGGTGTC
GGACAATCAGGATTTAGGTTTTATTGTCGCCGATCAGAACGATACGCCGATCACGCCTAACGATCTCAATAGCGTTATTC
CTTTCCGTCTGGATGCAGCTGCGGCAGCCAATGTCACACTTCGCGCCTGGCCTATCAGTATTACCGGTCAAAAACCGACC
GAAGGGCCGTTTAGCGCGCTGGGGTATTTACGCGTCGATTATCAATGA

Upstream 100 bases:

>100_bases
CTGCATTGCGCACTATGTATTGCCGAAGCAAAGCTTACAGCAAGCCGTCACTGTTATTTCGGCAGTTTGCACACATCCTG
GCTCATAAAGGAAATTATCA

Downstream 100 bases:

>100_bases
GGTACGGAGAATGAGAAGAGTATTCTTTAGCTGTTTCTGCGGGTTACTGTGGAGTTCCAGTGGATGGGCAGCTGACCCTT
TAGGAACGATTAATATCAAT

Product: mannose binding protein FimH homolog

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MKIICRLLLAMACLCLANISWATVCANSTGVAEDEHYDLSNVFNSTNNQPGQIVVLPEKSGWVGVSAICPPGTLVNYTYR
SYVTNFIVQETIDNYKYMQLNDYLLGAMSLVDSVMDIQFPPQNYIRMGTDPNVSQNLPFGVMDSRLIFRLKVIRPFINMV
EIPRQVMFTVYVTSTPYDPLVTPVYTISFGGRVEVPQNCELNAGQIVEFDFGDIGASLFSAAGPGNRPAGVMPQTKSIAV
KCTNVAAQAYLTMRLEASAVSGQAMVSDNQDLGFIVADQNDTPITPNDLNSVIPFRLDAAAAANVTLRAWPISITGQKPT
EGPFSALGYLRVDYQ

Sequences:

>Translated_335_residues
MKIICRLLLAMACLCLANISWATVCANSTGVAEDEHYDLSNVFNSTNNQPGQIVVLPEKSGWVGVSAICPPGTLVNYTYR
SYVTNFIVQETIDNYKYMQLNDYLLGAMSLVDSVMDIQFPPQNYIRMGTDPNVSQNLPFGVMDSRLIFRLKVIRPFINMV
EIPRQVMFTVYVTSTPYDPLVTPVYTISFGGRVEVPQNCELNAGQIVEFDFGDIGASLFSAAGPGNRPAGVMPQTKSIAV
KCTNVAAQAYLTMRLEASAVSGQAMVSDNQDLGFIVADQNDTPITPNDLNSVIPFRLDAAAAANVTLRAWPISITGQKPT
EGPFSALGYLRVDYQ
>Mature_335_residues
MKIICRLLLAMACLCLANISWATVCANSTGVAEDEHYDLSNVFNSTNNQPGQIVVLPEKSGWVGVSAICPPGTLVNYTYR
SYVTNFIVQETIDNYKYMQLNDYLLGAMSLVDSVMDIQFPPQNYIRMGTDPNVSQNLPFGVMDSRLIFRLKVIRPFINMV
EIPRQVMFTVYVTSTPYDPLVTPVYTISFGGRVEVPQNCELNAGQIVEFDFGDIGASLFSAAGPGNRPAGVMPQTKSIAV
KCTNVAAQAYLTMRLEASAVSGQAMVSDNQDLGFIVADQNDTPITPNDLNSVIPFRLDAAAAANVTLRAWPISITGQKPT
EGPFSALGYLRVDYQ

Specific function: Involved in regulation of length and mediation of adhesion of sfmA fimbriae (but not necessary for the production of fimbriae). Seems to be mannose binding adhesin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI145693100, Length=327, Percent_Identity=99.0825688073395, Blast_Score=669, Evalue=0.0,
Organism=Escherichia coli, GI1787173, Length=254, Percent_Identity=24.4094488188976, Blast_Score=72, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36612; Mature: 36612

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIICRLLLAMACLCLANISWATVCANSTGVAEDEHYDLSNVFNSTNNQPGQIVVLPEKS
CHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEECCC
GWVGVSAICPPGTLVNYTYRSYVTNFIVQETIDNYKYMQLNDYLLGAMSLVDSVMDIQFP
CCEEEEEECCCCCEEEHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHCCCC
PQNYIRMGTDPNVSQNLPFGVMDSRLIFRLKVIRPFINMVEIPRQVMFTVYVTSTPYDPL
CHHHEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCC
VTPVYTISFGGRVEVPQNCELNAGQIVEFDFGDIGASLFSAAGPGNRPAGVMPQTKSIAV
CCCEEEEECCCEECCCCCCCCCCCCEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCEEEE
KCTNVAAQAYLTMRLEASAVSGQAMVSDNQDLGFIVADQNDTPITPNDLNSVIPFRLDAA
EEECCEEEEEEEEEEEECCCCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEECCC
AAANVTLRAWPISITGQKPTEGPFSALGYLRVDYQ
CCCCEEEEEEEEEECCCCCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MKIICRLLLAMACLCLANISWATVCANSTGVAEDEHYDLSNVFNSTNNQPGQIVVLPEKS
CHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEECCC
GWVGVSAICPPGTLVNYTYRSYVTNFIVQETIDNYKYMQLNDYLLGAMSLVDSVMDIQFP
CCEEEEEECCCCCEEEHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHCCCC
PQNYIRMGTDPNVSQNLPFGVMDSRLIFRLKVIRPFINMVEIPRQVMFTVYVTSTPYDPL
CHHHEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCC
VTPVYTISFGGRVEVPQNCELNAGQIVEFDFGDIGASLFSAAGPGNRPAGVMPQTKSIAV
CCCEEEEECCCEECCCCCCCCCCCCEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCEEEE
KCTNVAAQAYLTMRLEASAVSGQAMVSDNQDLGFIVADQNDTPITPNDLNSVIPFRLDAA
EEECCEEEEEEEEEEEECCCCCCEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEECCC
AAANVTLRAWPISITGQKPTEGPFSALGYLRVDYQ
CCCCEEEEEEEEEECCCCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]