| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is ascB [H]
Identifier: 209400081
GI number: 209400081
Start: 3669154
End: 3670578
Strand: Direct
Name: ascB [H]
Synonym: ECH74115_3967
Alternate gene names: 209400081
Gene position: 3669154-3670578 (Clockwise)
Preceding gene: 209396010
Following gene: 209397638
Centisome position: 65.85
GC content: 52.28
Gene sequence:
>1425_bases ATGTCAGTATTTCCAGAAGGTTTTTTATGGGGCGGCGCGCTTGCCGCCAACCAGTCTGAAGGTGCGTTCCGTGAAGGTGG CAAAGGACTGACAACGGTCGATATGATCCCACACGGCGAGCATCGAATGGCGGTGAAACTGGGGCTGGAAAAACGTTTTC AGTTGCGCGATGACGAGTTTTATCCCAGCCATGAGGCGACGGGTTTTTATCATCGTTATAAAGAAGATATCGCCCTGATG GCAGAGATGGGATTCAAAGTGTTCCGTACCTCAATTGCCTGGAGCCGCCCCTTCCCGCAGGGTGATGAACTGACGCCCAA CCAGCAGGGCATTGCTTTTTACCGTTCTGTCTTTGAAGAGTGTAAAAAGTACGGTATCGAACCGCTGGTCACATTGTGCC ACTTCGATGTGCCGATGCAGCTGGTCACCGAATATGGCTCCTGGCGTAACCGCAAGCTGGTGGAGTTTTTCAGCCGCTAC GCCAGGACCTGCTTTGAAGCATTTGATGGTCTGGTGAAATACTGGCTAACCTTCAATGAAATCAACATTATGTTGCATAG CCCGTTCTCCGGCGCGGGGCTGGTGTTTGAAGAAGGTGAAAATCAGGATCAGGTGAAATATCAGGCCGCGCATCACCAGC TGGTTGCCAGTGCGCTAGCCACCAAAATCGCCCATGAGGTTAACCCGCAAAATCAGGTGGGCTGTATGCTGGCGGGCGGT AACTTCTACCCTTACAGTTGCAAGCCGGAAGATGTCTGGGCGGCGCTGGAGAAAGATCGGGAAAACCTGTTTTTTATCGA TGTGCAGGCGCGGGGCGCGTATCCGGCTTACTCTGCTCGCGTATTCCGCGAAAAAGGGGTAACCATCGACAAAGCACCGG GCGATGATGAGATCCTGAAAAACACCGTCGATTTTGTCTCTTTCAGCTATTACGCCTCGCGCTGCGCCTCGGCGGAGATG AACACCAACAATAGCAGTGCGGCGAACGTAGTGAAATCGCTGCGTAACCCGTATCTACAGGTGAGCGACTGGGGCTGGGG AATTGATCCACTCGGTCTGCGTATCACCATGAACATGATGTACGACCGCTATCAGAAGCCGCTGTTTCTGGTGGAAAACG GCCTCGGCGCAAAAGATGAACTTGCTGCCAATGGCGAGATTAACGATGACTATCGCATCAGCTATTTACGCGAACATATC CGCGCAATGGGCGAAGCGATTGCAGATGGCATTCCGCTGATGGGCTACACCACATGGGGCTGTATTGATTTAGTTTCCGC CTCTACGGGTGAAATGAGCAAACGCTACGGTTTTGTCTTTGTTGACCGTGACGACGCAGGCAACGGCACGCTGACGCGCA CACGTAAGAAATCGTTCTGGTGGTATAAAAAAGTGATTGCCAGTAATGGGGAAGATTTAGAGTAG
Upstream 100 bases:
>100_bases TTGAGGATATTCCTGTTGAGGAAGCGGCTGCCGAGGCGCGAAAGCATCAGAGCGCACAACCGACCGTCGCCAAAGAAGTA AGTCTTAATTGAGGATGAAA
Downstream 100 bases:
>100_bases GTAACCTACTGTCGCACTAACCAGGAAGGCCCGATAAGCGTTGCGCATCGGGCAATCTGGGGTTTGCTATCAGTTCTGAT TCCCTCATCAAGAACATCCC
Product: cryptic 6-phospho-beta-glucosidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 474; Mature: 473
Protein sequence:
>474_residues MSVFPEGFLWGGALAANQSEGAFREGGKGLTTVDMIPHGEHRMAVKLGLEKRFQLRDDEFYPSHEATGFYHRYKEDIALM AEMGFKVFRTSIAWSRPFPQGDELTPNQQGIAFYRSVFEECKKYGIEPLVTLCHFDVPMQLVTEYGSWRNRKLVEFFSRY ARTCFEAFDGLVKYWLTFNEINIMLHSPFSGAGLVFEEGENQDQVKYQAAHHQLVASALATKIAHEVNPQNQVGCMLAGG NFYPYSCKPEDVWAALEKDRENLFFIDVQARGAYPAYSARVFREKGVTIDKAPGDDEILKNTVDFVSFSYYASRCASAEM NTNNSSAANVVKSLRNPYLQVSDWGWGIDPLGLRITMNMMYDRYQKPLFLVENGLGAKDELAANGEINDDYRISYLREHI RAMGEAIADGIPLMGYTTWGCIDLVSASTGEMSKRYGFVFVDRDDAGNGTLTRTRKKSFWWYKKVIASNGEDLE
Sequences:
>Translated_474_residues MSVFPEGFLWGGALAANQSEGAFREGGKGLTTVDMIPHGEHRMAVKLGLEKRFQLRDDEFYPSHEATGFYHRYKEDIALM AEMGFKVFRTSIAWSRPFPQGDELTPNQQGIAFYRSVFEECKKYGIEPLVTLCHFDVPMQLVTEYGSWRNRKLVEFFSRY ARTCFEAFDGLVKYWLTFNEINIMLHSPFSGAGLVFEEGENQDQVKYQAAHHQLVASALATKIAHEVNPQNQVGCMLAGG NFYPYSCKPEDVWAALEKDRENLFFIDVQARGAYPAYSARVFREKGVTIDKAPGDDEILKNTVDFVSFSYYASRCASAEM NTNNSSAANVVKSLRNPYLQVSDWGWGIDPLGLRITMNMMYDRYQKPLFLVENGLGAKDELAANGEINDDYRISYLREHI RAMGEAIADGIPLMGYTTWGCIDLVSASTGEMSKRYGFVFVDRDDAGNGTLTRTRKKSFWWYKKVIASNGEDLE >Mature_473_residues SVFPEGFLWGGALAANQSEGAFREGGKGLTTVDMIPHGEHRMAVKLGLEKRFQLRDDEFYPSHEATGFYHRYKEDIALMA EMGFKVFRTSIAWSRPFPQGDELTPNQQGIAFYRSVFEECKKYGIEPLVTLCHFDVPMQLVTEYGSWRNRKLVEFFSRYA RTCFEAFDGLVKYWLTFNEINIMLHSPFSGAGLVFEEGENQDQVKYQAAHHQLVASALATKIAHEVNPQNQVGCMLAGGN FYPYSCKPEDVWAALEKDRENLFFIDVQARGAYPAYSARVFREKGVTIDKAPGDDEILKNTVDFVSFSYYASRCASAEMN TNNSSAANVVKSLRNPYLQVSDWGWGIDPLGLRITMNMMYDRYQKPLFLVENGLGAKDELAANGEINDDYRISYLREHIR AMGEAIADGIPLMGYTTWGCIDLVSASTGEMSKRYGFVFVDRDDAGNGTLTRTRKKSFWWYKKVIASNGEDLE
Specific function: Can hydrolyze salicin, cellobiose, and probably arbutin [H]
COG id: COG2723
COG function: function code G; Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 1 family [H]
Homologues:
Organism=Homo sapiens, GI110681710, Length=499, Percent_Identity=29.6593186372746, Blast_Score=177, Evalue=2e-44, Organism=Homo sapiens, GI32481206, Length=496, Percent_Identity=29.2338709677419, Blast_Score=168, Evalue=1e-41, Organism=Homo sapiens, GI13273313, Length=487, Percent_Identity=27.7207392197125, Blast_Score=162, Evalue=6e-40, Organism=Homo sapiens, GI24497614, Length=489, Percent_Identity=26.3803680981595, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI28376633, Length=491, Percent_Identity=23.4215885947047, Blast_Score=122, Evalue=7e-28, Organism=Escherichia coli, GI1789070, Length=474, Percent_Identity=97.8902953586498, Blast_Score=974, Evalue=0.0, Organism=Escherichia coli, GI2367270, Length=474, Percent_Identity=54.2194092827004, Blast_Score=539, Evalue=1e-154, Organism=Escherichia coli, GI2367174, Length=478, Percent_Identity=51.255230125523, Blast_Score=499, Evalue=1e-142, Organism=Caenorhabditis elegans, GI17552856, Length=485, Percent_Identity=30.3092783505155, Blast_Score=180, Evalue=2e-45, Organism=Caenorhabditis elegans, GI17539390, Length=492, Percent_Identity=30.0813008130081, Blast_Score=172, Evalue=4e-43, Organism=Drosophila melanogaster, GI21356577, Length=503, Percent_Identity=24.6520874751491, Blast_Score=117, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001360 - InterPro: IPR018120 - InterPro: IPR017853 - InterPro: IPR013781 [H]
Pfam domain/function: PF00232 Glyco_hydro_1 [H]
EC number: =3.2.1.86 [H]
Molecular weight: Translated: 53731; Mature: 53600
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: PS00572 GLYCOSYL_HYDROL_F1_1 ; PS00653 GLYCOSYL_HYDROL_F1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVFPEGFLWGGALAANQSEGAFREGGKGLTTVDMIPHGEHRMAVKLGLEKRFQLRDDEF CCCCCCCCEECCEEECCCCCCCHHCCCCCCEEEEECCCCCCEEEEEECCHHHCCCCCCCC YPSHEATGFYHRYKEDIALMAEMGFKVFRTSIAWSRPFPQGDELTPNQQGIAFYRSVFEE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH CKKYGIEPLVTLCHFDVPMQLVTEYGSWRNRKLVEFFSRYARTCFEAFDGLVKYWLTFNE HHHCCCCHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEE INIMLHSPFSGAGLVFEEGENQDQVKYQAAHHQLVASALATKIAHEVNPQNQVGCMLAGG EEEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC NFYPYSCKPEDVWAALEKDRENLFFIDVQARGAYPAYSARVFREKGVTIDKAPGDDEILK CCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHCCCEEECCCCCHHHHH NTVDFVSFSYYASRCASAEMNTNNSSAANVVKSLRNPYLQVSDWGWGIDPLGLRITMNMM HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEHHHH YDRYQKPLFLVENGLGAKDELAANGEINDDYRISYLREHIRAMGEAIADGIPLMGYTTWG HHHHCCCEEEEECCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH CIDLVSASTGEMSKRYGFVFVDRDDAGNGTLTRTRKKSFWWYKKVIASNGEDLE HHHHHCCCCCCHHHHCCEEEEECCCCCCCCEEECHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SVFPEGFLWGGALAANQSEGAFREGGKGLTTVDMIPHGEHRMAVKLGLEKRFQLRDDEF CCCCCCCEECCEEECCCCCCCHHCCCCCCEEEEECCCCCCEEEEEECCHHHCCCCCCCC YPSHEATGFYHRYKEDIALMAEMGFKVFRTSIAWSRPFPQGDELTPNQQGIAFYRSVFEE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH CKKYGIEPLVTLCHFDVPMQLVTEYGSWRNRKLVEFFSRYARTCFEAFDGLVKYWLTFNE HHHCCCCHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEE INIMLHSPFSGAGLVFEEGENQDQVKYQAAHHQLVASALATKIAHEVNPQNQVGCMLAGG EEEEEECCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC NFYPYSCKPEDVWAALEKDRENLFFIDVQARGAYPAYSARVFREKGVTIDKAPGDDEILK CCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHCCCEEECCCCCHHHHH NTVDFVSFSYYASRCASAEMNTNNSSAANVVKSLRNPYLQVSDWGWGIDPLGLRITMNMM HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCEEEHHHH YDRYQKPLFLVENGLGAKDELAANGEINDDYRISYLREHIRAMGEAIADGIPLMGYTTWG HHHHCCCEEEEECCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH CIDLVSASTGEMSKRYGFVFVDRDDAGNGTLTRTRKKSFWWYKKVIASNGEDLE HHHHHCCCCCCHHHHCCEEEEECCCCCCCCEEECHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1630307; 9278503 [H]