| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is yejA [H]
Identifier: 209399185
GI number: 209399185
Start: 3048656
End: 3050470
Strand: Direct
Name: yejA [H]
Synonym: ECH74115_3315
Alternate gene names: 209399185
Gene position: 3048656-3050470 (Clockwise)
Preceding gene: 209397294
Following gene: 209396226
Centisome position: 54.71
GC content: 50.69
Gene sequence:
>1815_bases ATGATTGTGCGCATACTGCTGCTGTTTATCGCTCTGTTCACCTTTGGTGCGCAGGCGCAGGCTATCAAGGAAAGCTATGC TTTTGCCGTGCTGGGCGAACCCCGGTACGCGTTTAATTTCAACCATTTTGATTATGTGAACCCCGCCGCGCCAAAAGGTG GGCAGATAACGTTGTCAGCCCTCGGTACCTTCGATAATTTCAACCGCTATGCACTGCGCGGCAACCCGGGCGCACGCACC GAGCAGCTGTACGACACGCTATTTACGACTTCCGATGACGAACCAGGCAGTTATTACCCGCTGATTGCTGAAAGCGCACG CTATGCTGACGATTATTCCTGGGTGGAGGTCGCTATTAATCCTCGCGCCCGTTTTCATGATGGTTCGCCCATTACTGCCC GCGATGTAGAGTTTACTTTTCAAAAATTTATGACTGAAGGCGTGCCGCAATTTCGTCTGGTCTACAAAGGCACCACCGTC AAAGCCATTGCGCCGTTAACCGTGCGCATTGAGTTAGCTAAACCCGGCAAAGAAGATATGTTGAGTCTGTTTTCGCTGCC GGTATTTCCAGAAAAGTACTGGAAGGATCACAAACTTAGCGATCCGCTCGCCACGCCTCCGCTTGCCAGTGGTCCGTACC GAATTACGTCCTGGAAAATGGGGCAAAATATTGTCTATTCCCGCGTGAAAGATTACTGGGCAGCAAACTTACCGGTAAAC CGTGGACGCTGGAATTTCGACACCATTCGCTACGATTATTACCTCGATGATAATGTCGCCTTTGAAGCGTTTAAAGCAGG TGCCTTTGATTTGCGTATGGAAAACGACGCCAAAAACTGGGCCACACGCTATAGCGGTAAAAATTTCGATAAAAAATACA TCATCAAAGATGAGCAAAAGAACGAATCAGCCCAGGATACGCGCTGGCTGGCGTTTAATATCCAACGTCCGGTATTCAGC GATCGCCGGGTCCGGGAAGCAATCACCCTCGCCTTTGACTTTGAATGGATGAACAAGGCGTTGTTTTACAATGCCTGGAG TCGCACGAACAGTTATTTTCAGAATACCGAATACGCGGCCAGAAATTACCCCGACGCCGCGGAGCTGGTGCTTCTGGCAC CAATGAAAAAAGATTTACCGCCAGAAGTCTTCACACAAATCTACCAGCCGCCGGTATCGAAAGGCGATGGCTACGATCGT GACAACCTGTTAAAAGCCGACAAACTTCTCAACGAAGCGGGCTGGGTGCTGAAAGGTCAGCAACGCGTTAATGCCACTAC GGGTCAGCCGCTCAGCTTTGAATTATTGCTTCCTGCAAGCAGCAATAGTCAGTGGGTATTGCCGTTCCAGCACAGCCTGC AACGGCTGGGTATCAACATGGACATTCGCAAGGTGGATCACTCGCAAATCACCAACCGCATGCGCAGTCGCGACTATGAC ATGATGCCGCGCCTATGGCGGGCGATGCCGTGGCCCAGTTCCGATTTACAGATTTCCTGGTCATCGGAATATATCAATTC CACTTATAATGCCCCCGGCGTGCAAAGCCCGGTTATCGACTCGCTGATCAACCAAATTATTGCCGCGCAGGGAAATAAAG AAAAATTACTGCCGTTAGGGCGAGCACTGGATCGCGTATTAACGTGGAATTATTACATGCTGCCAATGTGGTACATGGCG GAAGACCGTCTCGCCTGGTGGGATAAATTCTCCCAACCCGCTGTGCGCCCTGTTTACAGTCTGGGTATCGATACCTGGTG GTATGATGTTAATAAAGCGGCCAAACTGCCGTCAGCCAGACAACAGGGAGAGTAG
Upstream 100 bases:
>100_bases GTATACGCCGCAGTGGTAAGGTGTGCTTACGTCCCTTATTATTCATAGTGAAAGCATGCCGGATTGCGGCTAATGATGAG TAAAAGGAAATCCGTTGCAG
Downstream 100 bases:
>100_bases ATGGGCGCTTATCTGATTCGCCGTCTGTTGCTGGTGATCCCAACGTTATGGGCGATTATCACTATCAACTTTTTCATCGT GCAAATTGCGCCTGGCGGTC
Product: ABC transporter, periplasmic solute-binding protein
Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 604; Mature: 604
Protein sequence:
>604_residues MIVRILLLFIALFTFGAQAQAIKESYAFAVLGEPRYAFNFNHFDYVNPAAPKGGQITLSALGTFDNFNRYALRGNPGART EQLYDTLFTTSDDEPGSYYPLIAESARYADDYSWVEVAINPRARFHDGSPITARDVEFTFQKFMTEGVPQFRLVYKGTTV KAIAPLTVRIELAKPGKEDMLSLFSLPVFPEKYWKDHKLSDPLATPPLASGPYRITSWKMGQNIVYSRVKDYWAANLPVN RGRWNFDTIRYDYYLDDNVAFEAFKAGAFDLRMENDAKNWATRYSGKNFDKKYIIKDEQKNESAQDTRWLAFNIQRPVFS DRRVREAITLAFDFEWMNKALFYNAWSRTNSYFQNTEYAARNYPDAAELVLLAPMKKDLPPEVFTQIYQPPVSKGDGYDR DNLLKADKLLNEAGWVLKGQQRVNATTGQPLSFELLLPASSNSQWVLPFQHSLQRLGINMDIRKVDHSQITNRMRSRDYD MMPRLWRAMPWPSSDLQISWSSEYINSTYNAPGVQSPVIDSLINQIIAAQGNKEKLLPLGRALDRVLTWNYYMLPMWYMA EDRLAWWDKFSQPAVRPVYSLGIDTWWYDVNKAAKLPSARQQGE
Sequences:
>Translated_604_residues MIVRILLLFIALFTFGAQAQAIKESYAFAVLGEPRYAFNFNHFDYVNPAAPKGGQITLSALGTFDNFNRYALRGNPGART EQLYDTLFTTSDDEPGSYYPLIAESARYADDYSWVEVAINPRARFHDGSPITARDVEFTFQKFMTEGVPQFRLVYKGTTV KAIAPLTVRIELAKPGKEDMLSLFSLPVFPEKYWKDHKLSDPLATPPLASGPYRITSWKMGQNIVYSRVKDYWAANLPVN RGRWNFDTIRYDYYLDDNVAFEAFKAGAFDLRMENDAKNWATRYSGKNFDKKYIIKDEQKNESAQDTRWLAFNIQRPVFS DRRVREAITLAFDFEWMNKALFYNAWSRTNSYFQNTEYAARNYPDAAELVLLAPMKKDLPPEVFTQIYQPPVSKGDGYDR DNLLKADKLLNEAGWVLKGQQRVNATTGQPLSFELLLPASSNSQWVLPFQHSLQRLGINMDIRKVDHSQITNRMRSRDYD MMPRLWRAMPWPSSDLQISWSSEYINSTYNAPGVQSPVIDSLINQIIAAQGNKEKLLPLGRALDRVLTWNYYMLPMWYMA EDRLAWWDKFSQPAVRPVYSLGIDTWWYDVNKAAKLPSARQQGE >Mature_604_residues MIVRILLLFIALFTFGAQAQAIKESYAFAVLGEPRYAFNFNHFDYVNPAAPKGGQITLSALGTFDNFNRYALRGNPGART EQLYDTLFTTSDDEPGSYYPLIAESARYADDYSWVEVAINPRARFHDGSPITARDVEFTFQKFMTEGVPQFRLVYKGTTV KAIAPLTVRIELAKPGKEDMLSLFSLPVFPEKYWKDHKLSDPLATPPLASGPYRITSWKMGQNIVYSRVKDYWAANLPVN RGRWNFDTIRYDYYLDDNVAFEAFKAGAFDLRMENDAKNWATRYSGKNFDKKYIIKDEQKNESAQDTRWLAFNIQRPVFS DRRVREAITLAFDFEWMNKALFYNAWSRTNSYFQNTEYAARNYPDAAELVLLAPMKKDLPPEVFTQIYQPPVSKGDGYDR DNLLKADKLLNEAGWVLKGQQRVNATTGQPLSFELLLPASSNSQWVLPFQHSLQRLGINMDIRKVDHSQITNRMRSRDYD MMPRLWRAMPWPSSDLQISWSSEYINSTYNAPGVQSPVIDSLINQIIAAQGNKEKLLPLGRALDRVLTWNYYMLPMWYMA EDRLAWWDKFSQPAVRPVYSLGIDTWWYDVNKAAKLPSARQQGE
Specific function: Unknown
COG id: COG4166
COG function: function code E; ABC-type oligopeptide transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To H.influenzae hbpA [H]
Homologues:
Organism=Escherichia coli, GI87082063, Length=604, Percent_Identity=98.5099337748344, Blast_Score=1227, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000914 [H]
Pfam domain/function: PF00496 SBP_bac_5 [H]
EC number: NA
Molecular weight: Translated: 69744; Mature: 69744
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVRILLLFIALFTFGAQAQAIKESYAFAVLGEPRYAFNFNHFDYVNPAAPKGGQITLSA CHHHHHHHHHHHHHCCCHHHHHHHCCEEEEECCCCEEEECCCCCCCCCCCCCCCEEEEEE LGTFDNFNRYALRGNPGARTEQLYDTLFTTSDDEPGSYYPLIAESARYADDYSWVEVAIN ECCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCEEEEEEC PRARFHDGSPITARDVEFTFQKFMTEGVPQFRLVYKGTTVKAIAPLTVRIELAKPGKEDM CCCEECCCCCCEEHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEEEEEEEEECCCCHHHH LSLFSLPVFPEKYWKDHKLSDPLATPPLASGPYRITSWKMGQNIVYSRVKDYWAANLPVN HHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCC RGRWNFDTIRYDYYLDDNVAFEAFKAGAFDLRMENDAKNWATRYSGKNFDKKYIIKDEQK CCCCCCEEEEEEEEECCCCEEHHHCCCEEEEEECCCCHHHHHHCCCCCCCCEEEECCCCC NESAQDTRWLAFNIQRPVFSDRRVREAITLAFDFEWMNKALFYNAWSRTNSYFQNTEYAA CCCCCCCEEEEEEECCCCCCCHHHHHHEEEEEEHHHHHHHHEEECHHHCCHHHHCCCHHH RNYPDAAELVLLAPMKKDLPPEVFTQIYQPPVSKGDGYDRDNLLKADKLLNEAGWVLKGQ CCCCCHHHEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECC QRVNATTGQPLSFELLLPASSNSQWVLPFQHSLQRLGINMDIRKVDHSQITNRMRSRDYD CEECCCCCCCEEEEEEEECCCCCCEEEHHHHHHHHCCCCCEEEECCHHHHHHHHHHCCCH MMPRLWRAMPWPSSDLQISWSSEYINSTYNAPGVQSPVIDSLINQIIAAQGNKEKLLPLG HHHHHHHHCCCCCCCEEEEECHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH RALDRVLTWNYYMLPMWYMAEDRLAWWDKFSQPAVRPVYSLGIDTWWYDVNKAAKLPSAR HHHHHHHCCCEEEEEEEEECCCHHHHHHHCCCCHHHHHHHCCCCCEEEECCHHHCCCCHH QQGE HCCC >Mature Secondary Structure MIVRILLLFIALFTFGAQAQAIKESYAFAVLGEPRYAFNFNHFDYVNPAAPKGGQITLSA CHHHHHHHHHHHHHCCCHHHHHHHCCEEEEECCCCEEEECCCCCCCCCCCCCCCEEEEEE LGTFDNFNRYALRGNPGARTEQLYDTLFTTSDDEPGSYYPLIAESARYADDYSWVEVAIN ECCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCEEEEEEC PRARFHDGSPITARDVEFTFQKFMTEGVPQFRLVYKGTTVKAIAPLTVRIELAKPGKEDM CCCEECCCCCCEEHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEEEEEEEEECCCCHHHH LSLFSLPVFPEKYWKDHKLSDPLATPPLASGPYRITSWKMGQNIVYSRVKDYWAANLPVN HHHHCCCCCCHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCCC RGRWNFDTIRYDYYLDDNVAFEAFKAGAFDLRMENDAKNWATRYSGKNFDKKYIIKDEQK CCCCCCEEEEEEEEECCCCEEHHHCCCEEEEEECCCCHHHHHHCCCCCCCCEEEECCCCC NESAQDTRWLAFNIQRPVFSDRRVREAITLAFDFEWMNKALFYNAWSRTNSYFQNTEYAA CCCCCCCEEEEEEECCCCCCCHHHHHHEEEEEEHHHHHHHHEEECHHHCCHHHHCCCHHH RNYPDAAELVLLAPMKKDLPPEVFTQIYQPPVSKGDGYDRDNLLKADKLLNEAGWVLKGQ CCCCCHHHEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECC QRVNATTGQPLSFELLLPASSNSQWVLPFQHSLQRLGINMDIRKVDHSQITNRMRSRDYD CEECCCCCCCEEEEEEEECCCCCCEEEHHHHHHHHCCCCCEEEECCHHHHHHHHHHCCCH MMPRLWRAMPWPSSDLQISWSSEYINSTYNAPGVQSPVIDSLINQIIAAQGNKEKLLPLG HHHHHHHHCCCCCCCEEEEECHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH RALDRVLTWNYYMLPMWYMAEDRLAWWDKFSQPAVRPVYSLGIDTWWYDVNKAAKLPSAR HHHHHHHCCCEEEEEEEEECCCHHHHHHHCCCCHHHHHHHCCCCCEEEECCHHHCCCCHH QQGE HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; oligopeptides [Periplasm]; H2O [C]
Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503; 9097040 [H]