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The map label for this gene is yncE

Identifier: 209399084

GI number: 209399084

Start: 1953661

End: 1954722

Strand: Direct

Name: yncE

Synonym: ECH74115_2058

Alternate gene names: 209399084

Gene position: 1953661-1954722 (Clockwise)

Preceding gene: 209398301

Following gene: 209397593

Centisome position: 35.06

GC content: 50.38

Gene sequence:

>1062_bases
ATGCATTTACGTCATCTGTTTTCATTGCGCCTGCGTGGTTCATTACTGTTAGGTTCATTGCTTGTTGCTTCATCATTCAG
TACGCAGGCCGCAGAAGAAATGCTGCGTAAAGCGGTAGGTAAAGGTGCCTACGAAATGGCTTATAGCCAGCAAGAAAACG
CGCTGTGGCTCGCCACTTCGCAAAGCCGCAAACTGGATAAAGGCGGCGTGGTTTATCGTCTTGATCCGGTCACTCTGGAA
GTGACGCAGGCGATCCATAACGATCTCAAGCCGTTTGGTGCCACCATCAATAACACGACTCAGACGTTGTGGTTTGGTAA
CACCGTAAACAGCGCGGTCACGGCGATAGATGCCAAAACTGGCGAGGTGAAAGGCCGTCTGGTGCTGGATGATCGTAAGC
GCACGGAAGAGGTGCGCCCGCTGCAACCGCGTGAGCTGGTAGCTGATGATGCCACGAACACCGTTTACATCAGTGGTATT
GGTAAAGATAGCGTGATTTGGGTCGTTGATGGCGAGAATATCAAACTGAAAACCGCCATCCAGAACACCGGTAAAATGAG
TACCGGTCTGGCACTGGATAGCAAAGGCAAACGTCTTTACACCACTAACGCTGACGGCGAATTGATTACCATCGACACCG
CCGACAATAAAATCCTCAGCCGTAAAAAGCTGCTGGATGACGGCAAAGAGCACTTCTTTATCAACATCAGCCTTGATACC
GCCAGGCAGCGTGCATTTATCACCGATTCTAAAGCGGCAGAAGTGTTAGTGGTCGATACCCGTAATGGCAATATTCTGGC
GAAGGTTGCGGCACCGGAATCACTGGCTGTGCTGTTTAACCCAGCGCGTAATGAAGCCTACGTAACGCATCGTCAGGCAG
GTAAAGTCAGTGTGATTGACGCGAAAAGCTATAAAGTGGTGAAAACGTTCGATACGCCGACTCATCCGAACAGCCTGGCG
CTGTCTGCCGATGGCAAAACGCTGTATGTCAGTGTGAAACAAAAATCCACTAAACAGCAGGAAGCTACCCAGCCAGACGA
TGTGATTCGTATTGCGCTGTAA

Upstream 100 bases:

>100_bases
AATGATTACCATTCCCATTTATAACAAGAGCGTAACGATGATTACGCTTAGCGAAGCATTGTGAAGCAGCAAAAATATCG
GTTCATCAAAGGGAGTCGTC

Downstream 100 bases:

>100_bases
TAGATATGGCGAGGGTGATAACGGAGAGACTTGCCTGACTTTGATCACGCCGCATGCGGCACACCTTCGTCAGTAATCTA
AATTTGCCCGGCACGTAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MHLRHLFSLRLRGSLLLGSLLVASSFSTQAAEEMLRKAVGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLE
VTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGI
GKDSVIWVVDGENIKLKTAIQNTGKMSTGLALDSKGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDT
ARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLA
LSADGKTLYVSVKQKSTKQQEATQPDDVIRIAL

Sequences:

>Translated_353_residues
MHLRHLFSLRLRGSLLLGSLLVASSFSTQAAEEMLRKAVGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLE
VTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGI
GKDSVIWVVDGENIKLKTAIQNTGKMSTGLALDSKGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDT
ARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLA
LSADGKTLYVSVKQKSTKQQEATQPDDVIRIAL
>Mature_353_residues
MHLRHLFSLRLRGSLLLGSLLVASSFSTQAAEEMLRKAVGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLE
VTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGI
GKDSVIWVVDGENIKLKTAIQNTGKMSTGLALDSKGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDT
ARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLA
LSADGKTLYVSVKQKSTKQQEATQPDDVIRIAL

Specific function: Unknown

COG id: COG3391

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787724, Length=353, Percent_Identity=98.5835694050991, Blast_Score=708, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YNCE_ECO57 (Q8X9X2)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   G85732
- PIR:   H90885
- RefSeq:   NP_287709.1
- RefSeq:   NP_310083.1
- ProteinModelPortal:   Q8X9X2
- SMR:   Q8X9X2
- EnsemblBacteria:   EBESCT00000028258
- EnsemblBacteria:   EBESCT00000056612
- GeneID:   917255
- GeneID:   960790
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z2267
- KEGG:   ecs:ECs2056
- GeneTree:   EBGT00050000011668
- HOGENOM:   HBG677534
- OMA:   SREKEAT
- ProtClustDB:   CLSK880060
- BioCyc:   ECOL83334:ECS2056-MONOMER
- InterPro:   IPR011048
- InterPro:   IPR015943
- Gene3D:   G3DSA:2.130.10.10

Pfam domain/function: SSF51004 Cyt_cd1_haem_C

EC number: NA

Molecular weight: Translated: 38668; Mature: 38668

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLRHLFSLRLRGSLLLGSLLVASSFSTQAAEEMLRKAVGKGAYEMAYSQQENALWLATS
CCHHHEEHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEHHCCCCCEEEEEEC
QSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKT
CCCCCCCCCEEEEECCCEEEHHHHHHHCCCCCCCEECCCEEEEEECCCCCCEEEEEECCC
GEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKDSVIWVVDGENIKLKTAI
CCEEEEEEECCCCCHHHCCCCCCHHHHCCCCCCEEEEEECCCCEEEEEEECCCEEEEEEE
QNTGKMSTGLALDSKGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDT
CCCCCCCCCEEECCCCCEEEEECCCCCEEEEECCCCHHHHHHHHHCCCCEEEEEEEEECC
ARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESLAVLFNPARNEAYVTHRQAGKVSVID
CCCEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEEECCCCCEEEEECCCCEEEEEE
AKSYKVVKTFDTPTHPNSLALSADGKTLYVSVKQKSTKQQEATQPDDVIRIAL
CCCEEEEEEECCCCCCCEEEEECCCCEEEEEEECCCCHHHHCCCCCCEEEEEC
>Mature Secondary Structure
MHLRHLFSLRLRGSLLLGSLLVASSFSTQAAEEMLRKAVGKGAYEMAYSQQENALWLATS
CCHHHEEHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEHHCCCCCEEEEEEC
QSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKT
CCCCCCCCCEEEEECCCEEEHHHHHHHCCCCCCCEECCCEEEEEECCCCCCEEEEEECCC
GEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKDSVIWVVDGENIKLKTAI
CCEEEEEEECCCCCHHHCCCCCCHHHHCCCCCCEEEEEECCCCEEEEEEECCCEEEEEEE
QNTGKMSTGLALDSKGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDT
CCCCCCCCCEEECCCCCEEEEECCCCCEEEEECCCCHHHHHHHHHCCCCEEEEEEEEECC
ARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESLAVLFNPARNEAYVTHRQAGKVSVID
CCCEEEEECCCCCEEEEEECCCCCEEEEEECCCEEEEEEECCCCCEEEEECCCCEEEEEE
AKSYKVVKTFDTPTHPNSLALSADGKTLYVSVKQKSTKQQEATQPDDVIRIAL
CCCEEEEEEECCCCCCCEEEEECCCCEEEEEEECCCCHHHHCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796