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The map label for this gene is yfcV [H]

Identifier: 209398661

GI number: 209398661

Start: 3223391

End: 3223954

Strand: Reverse

Name: yfcV [H]

Synonym: ECH74115_3481

Alternate gene names: 209398661

Gene position: 3223954-3223391 (Counterclockwise)

Preceding gene: 209399221

Following gene: 209396561

Centisome position: 57.86

GC content: 47.34

Gene sequence:

>564_bases
ATGAGTAAGTTTGTAAAAACAGCTATTGCTGCAACAATGGTAATGGGTGCGTTCGCTTCTACTTCAACAATCGCCGCTGG
CAACAATGGTACAGCACGTTTCTACGGCACCATTGAAGATTCCCCGTGCTCTATCGTTCCTGATGATCACAAACTGGAAG
TTGATATGGGTGACATTGGTTCAGGGATCCTGAAAAATAACGGGACTTCTACACCGAAAGCTTTCCAGATCCATCTGCAA
GACTGTGTGTTTGACACCCAGACAACGATGACCACTACCTTCACCGGTAACGCGTCTTCTACCAACAGCGGCAATTACTA
CACCATTTACAATACCGATACTGGTGCGGCATTTAACAATGTCAGCCTGGCCATTGGTGACGCTCAGGGAACCTCTTATA
AAAGCGGCGCGGGTATCGAACAGAAAATCGTAAACGATACGGCGACCAACAAAGGCAAAGCGAAGCAGACGCTGGACTTT
AAAGCCTGGCTGGTGGGCGCTGCTGATGCGCCAGATTTAGGTAATTTTGAAGCCAACACGACCTTCCAGATTACTTATCT
CTAA

Upstream 100 bases:

>100_bases
GGATAGCTTATTCAATGGCTGGGTATAAATAATTGCTATTGACTGAATCAATGTATTGCAATGTTTATATTTTTAATTAT
TTATGGTTTAAGGACAAATA

Downstream 100 bases:

>100_bases
GTGATACCCCCATAGCTTTCGGGCTATGGGGTTTTTAAATGGAATTCGCGCAAATTATAATAATTACGGATGGATACGTG
TATGCCTGACCATTCTCTTT

Product: fimbrial protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MSKFVKTAIAATMVMGAFASTSTIAAGNNGTARFYGTIEDSPCSIVPDDHKLEVDMGDIGSGILKNNGTSTPKAFQIHLQ
DCVFDTQTTMTTTFTGNASSTNSGNYYTIYNTDTGAAFNNVSLAIGDAQGTSYKSGAGIEQKIVNDTATNKGKAKQTLDF
KAWLVGAADAPDLGNFEANTTFQITYL

Sequences:

>Translated_187_residues
MSKFVKTAIAATMVMGAFASTSTIAAGNNGTARFYGTIEDSPCSIVPDDHKLEVDMGDIGSGILKNNGTSTPKAFQIHLQ
DCVFDTQTTMTTTFTGNASSTNSGNYYTIYNTDTGAAFNNVSLAIGDAQGTSYKSGAGIEQKIVNDTATNKGKAKQTLDF
KAWLVGAADAPDLGNFEANTTFQITYL
>Mature_186_residues
SKFVKTAIAATMVMGAFASTSTIAAGNNGTARFYGTIEDSPCSIVPDDHKLEVDMGDIGSGILKNNGTSTPKAFQIHLQD
CVFDTQTTMTTTFTGNASSTNSGNYYTIYNTDTGAAFNNVSLAIGDAQGTSYKSGAGIEQKIVNDTATNKGKAKQTLDFK
AWLVGAADAPDLGNFEANTTFQITYL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788680, Length=187, Percent_Identity=88.7700534759358, Blast_Score=314, Evalue=2e-87,
Organism=Escherichia coli, GI1789422, Length=191, Percent_Identity=29.3193717277487, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 19661; Mature: 19530

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKFVKTAIAATMVMGAFASTSTIAAGNNGTARFYGTIEDSPCSIVPDDHKLEVDMGDIG
CCHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEEECCCCCEECCCCCEEEEECCCCC
SGILKNNGTSTPKAFQIHLQDCVFDTQTTMTTTFTGNASSTNSGNYYTIYNTDTGAAFNN
CCEECCCCCCCCEEEEEEEEHHEECCCCEEEEEEECCCCCCCCCCEEEEEECCCCCEECC
VSLAIGDAQGTSYKSGAGIEQKIVNDTATNKGKAKQTLDFKAWLVGAADAPDLGNFEANT
EEEEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCC
TFQITYL
EEEEEEC
>Mature Secondary Structure 
SKFVKTAIAATMVMGAFASTSTIAAGNNGTARFYGTIEDSPCSIVPDDHKLEVDMGDIG
CHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEEECCCCCEECCCCCEEEEECCCCC
SGILKNNGTSTPKAFQIHLQDCVFDTQTTMTTTFTGNASSTNSGNYYTIYNTDTGAAFNN
CCEECCCCCCCCEEEEEEEEHHEECCCCEEEEEEECCCCCCCCCCEEEEEECCCCCEECC
VSLAIGDAQGTSYKSGAGIEQKIVNDTATNKGKAKQTLDFKAWLVGAADAPDLGNFEANT
EEEEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCC
TFQITYL
EEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]