| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is yihQ [H]
Identifier: 209398541
GI number: 209398541
Start: 4966150
End: 4968186
Strand: Reverse
Name: yihQ [H]
Synonym: ECH74115_5324
Alternate gene names: 209398541
Gene position: 4968186-4966150 (Counterclockwise)
Preceding gene: 209396303
Following gene: 209399281
Centisome position: 89.16
GC content: 53.51
Gene sequence:
>2037_bases ATGGATACGCCACGCCCACAATTACCAGATTTTGAATTTCATCAGAATAACGACAGTTTTACCCTACATTTTCGACAACG TCTTATTTTAACCCATAGCAAAGATAATCCTTGTTTATGGATTGGCTCAGGTATAGCGGACATCGATATGTTCCGCGGCA ATTTCAGCATTAAAGATAAACTACAGGAGAAAATTGCGCTTACCGACGCCATCGTCAGCCAGTCACCGGATGGTTGGTTA ATCCATTTCAGTCGTGGTTCTGACATTAGCGCCACGCTGAATATCTCTGCCGACGATCAGGGCCGTTTATTGCTGGAACT ACAAAACGACAACCTTAACCACAACCGCATCTGGCTGCGCCTTGCCGCTCAACCAGAGGACCATATCTACGGCTGCGGCG AACAGTTTTCCTACTTCGATCTGCGCGGCAAACCGTTCCCGCTATGGACCAGTGAACAAGGCGTTGGTCGCAACAAACAA ACCTATGTCACCTGGCAGGCCGACTGCAAAGAAAATGCGGGCGGCGACTATTACTGGACTTTCTTCCCACAGCCTACGTT TGTCAGCACGCAGAAGTATTATTGCCATGTTGATAACAGTTGCTATATGAACTTCGACTTTAGTGCCCCGGAATACCATG AACTGGCGCTGTGGGAAGACAAAGCAACGCTGCGTTTTGAATGTGCTGACACATACATCTCCCTGCTGGAAAAATTAACC GCCCTGCTGGGACGCCAGCCAGAACTGCCCGACTGGATTTATGACGGAGTAACGCTCGGCATTCAGGGCGGGACGGAAGT GTGCCAGAAGAAACTGGACACCATGCGTAACGCGGGCGTGAAGGTCAACGGCATCTGGGCGCAGGACTGGTCCGGTATTC GTATGACCTCTTTTGGCAAACGCGTGATGTGGAACTGGAAGTGGAACAGCGAAAACTACCCGCAACTGGATTCGCGTATC AAGCAGTGGAACAAAGAGGGCGTGCAGTTCCTTGCCTATATCAACCCGTATGTTGCCAGTGATAAAGATCTCTGCGAAGA GGCGGCAAAGCGCGGTTATCTGGCAAAAGATGTCGCCGGTGGCGACTATCTGGTGGAGTTTGGCGAGTTCTACGGCGGCG TTGTCGATCTCACCAATCCGGAAGCCTACGCCTGGTTCAAGGAAGTTATCAAAAAGAACATGATTGAACTCGGCTGCGGC GGCTGGATGGCTGACTTCGGCGAGTATCTGCCCACCGACACGTACCTGCATAACGGCATCAGCGCGGAAATTATGCATAA CGCCTGGCCCGCGCTGTGGGCGAAATGTAACTACGAAGCCCTTGAAGAAACGGGCAAGCTCGGCGAGATCCTCTTCTTTA TGCGCGCCGGTTCTACCGGTAGCCAGAAATACTCCACCATGATGTGGGCGGGTGACCAGAACGTGGACTGGAGTCTGGAC GATGGCCTGGCGTCGGTTGTCCCGGCGGCGCTATCTCTGGCAATGACCGGACATGGCCTGCATCACAGCGACATTGGCGG TTATACCACCCTGTTTGAGATGAAGCGCAGCAAAGAGCTGCTGCTGCGCTGGTGCGATTTCAGCGCCTTCACGCCGATGA TGCGCACCCACGAAGGTAACCGTCCTGGCGACAACTGGCAGTTTGACGGCGACGCGGAAACCATCGCCCATTTCGCCCGT ATGACCACCGTCTTCACCACCCTGAAACCTTACCTGAAAGAGGCCGTCGCGCTGAATGCGAAGTCCGGCCTGCCGGTTAT GCGCCCGCTGTTCCTGCATTACGAAGACGACGCGCAGACCTATTCCCTGAAATATCAGTACCTGTTAGGTCGCGACATTC TGGTTGCTCCGGTACACGAAGAAGGTCGCAGCGACTGGACGCTCTATCTGCCAGAGGATAACTGGGTCCACGCCTGGACC GGAGAAACCTTCCACGGTGGAGAAATAACTGTTGAAGCGCCCATCGGCAAGCCGCCGGTCTTTTATCGCGCCGACAGCGA ATGGGCTGCACTGTTCGCCTCGTTAAAAAACATCTAA
Upstream 100 bases:
>100_bases TGCGGGTTTAAATTTATATCCGCACACATTCTTTAATTAATTAAACCTGTAATAACAGGATGGCATGAAATATTAGCTTT ATACTCTATGGAGATTATTT
Downstream 100 bases:
>100_bases TCATGCCCGCCCGTGGGGAAACTCACGGGCAAATGGAGAATAACGATGAGTCACATCACAACGGAAGATCCGGCAACTTT GCGCCTGCCCTTTAAAGAGA
Product: alpha-glucosidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 678; Mature: 678
Protein sequence:
>678_residues MDTPRPQLPDFEFHQNNDSFTLHFRQRLILTHSKDNPCLWIGSGIADIDMFRGNFSIKDKLQEKIALTDAIVSQSPDGWL IHFSRGSDISATLNISADDQGRLLLELQNDNLNHNRIWLRLAAQPEDHIYGCGEQFSYFDLRGKPFPLWTSEQGVGRNKQ TYVTWQADCKENAGGDYYWTFFPQPTFVSTQKYYCHVDNSCYMNFDFSAPEYHELALWEDKATLRFECADTYISLLEKLT ALLGRQPELPDWIYDGVTLGIQGGTEVCQKKLDTMRNAGVKVNGIWAQDWSGIRMTSFGKRVMWNWKWNSENYPQLDSRI KQWNKEGVQFLAYINPYVASDKDLCEEAAKRGYLAKDVAGGDYLVEFGEFYGGVVDLTNPEAYAWFKEVIKKNMIELGCG GWMADFGEYLPTDTYLHNGISAEIMHNAWPALWAKCNYEALEETGKLGEILFFMRAGSTGSQKYSTMMWAGDQNVDWSLD DGLASVVPAALSLAMTGHGLHHSDIGGYTTLFEMKRSKELLLRWCDFSAFTPMMRTHEGNRPGDNWQFDGDAETIAHFAR MTTVFTTLKPYLKEAVALNAKSGLPVMRPLFLHYEDDAQTYSLKYQYLLGRDILVAPVHEEGRSDWTLYLPEDNWVHAWT GETFHGGEITVEAPIGKPPVFYRADSEWAALFASLKNI
Sequences:
>Translated_678_residues MDTPRPQLPDFEFHQNNDSFTLHFRQRLILTHSKDNPCLWIGSGIADIDMFRGNFSIKDKLQEKIALTDAIVSQSPDGWL IHFSRGSDISATLNISADDQGRLLLELQNDNLNHNRIWLRLAAQPEDHIYGCGEQFSYFDLRGKPFPLWTSEQGVGRNKQ TYVTWQADCKENAGGDYYWTFFPQPTFVSTQKYYCHVDNSCYMNFDFSAPEYHELALWEDKATLRFECADTYISLLEKLT ALLGRQPELPDWIYDGVTLGIQGGTEVCQKKLDTMRNAGVKVNGIWAQDWSGIRMTSFGKRVMWNWKWNSENYPQLDSRI KQWNKEGVQFLAYINPYVASDKDLCEEAAKRGYLAKDVAGGDYLVEFGEFYGGVVDLTNPEAYAWFKEVIKKNMIELGCG GWMADFGEYLPTDTYLHNGISAEIMHNAWPALWAKCNYEALEETGKLGEILFFMRAGSTGSQKYSTMMWAGDQNVDWSLD DGLASVVPAALSLAMTGHGLHHSDIGGYTTLFEMKRSKELLLRWCDFSAFTPMMRTHEGNRPGDNWQFDGDAETIAHFAR MTTVFTTLKPYLKEAVALNAKSGLPVMRPLFLHYEDDAQTYSLKYQYLLGRDILVAPVHEEGRSDWTLYLPEDNWVHAWT GETFHGGEITVEAPIGKPPVFYRADSEWAALFASLKNI >Mature_678_residues MDTPRPQLPDFEFHQNNDSFTLHFRQRLILTHSKDNPCLWIGSGIADIDMFRGNFSIKDKLQEKIALTDAIVSQSPDGWL IHFSRGSDISATLNISADDQGRLLLELQNDNLNHNRIWLRLAAQPEDHIYGCGEQFSYFDLRGKPFPLWTSEQGVGRNKQ TYVTWQADCKENAGGDYYWTFFPQPTFVSTQKYYCHVDNSCYMNFDFSAPEYHELALWEDKATLRFECADTYISLLEKLT ALLGRQPELPDWIYDGVTLGIQGGTEVCQKKLDTMRNAGVKVNGIWAQDWSGIRMTSFGKRVMWNWKWNSENYPQLDSRI KQWNKEGVQFLAYINPYVASDKDLCEEAAKRGYLAKDVAGGDYLVEFGEFYGGVVDLTNPEAYAWFKEVIKKNMIELGCG GWMADFGEYLPTDTYLHNGISAEIMHNAWPALWAKCNYEALEETGKLGEILFFMRAGSTGSQKYSTMMWAGDQNVDWSLD DGLASVVPAALSLAMTGHGLHHSDIGGYTTLFEMKRSKELLLRWCDFSAFTPMMRTHEGNRPGDNWQFDGDAETIAHFAR MTTVFTTLKPYLKEAVALNAKSGLPVMRPLFLHYEDDAQTYSLKYQYLLGRDILVAPVHEEGRSDWTLYLPEDNWVHAWT GETFHGGEITVEAPIGKPPVFYRADSEWAALFASLKNI
Specific function: Exhibits hydrolysis activity against alpha-glucosyl fluoride, although natural substrates, such as alpha-glucobioses are scarcely hydrolyzed [H]
COG id: COG1501
COG function: function code G; Alpha-glucosidases, family 31 of glycosyl hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 31 family [H]
Homologues:
Organism=Homo sapiens, GI153791946, Length=349, Percent_Identity=24.9283667621776, Blast_Score=110, Evalue=4e-24, Organism=Homo sapiens, GI88900491, Length=385, Percent_Identity=25.1948051948052, Blast_Score=103, Evalue=4e-22, Organism=Homo sapiens, GI38202257, Length=385, Percent_Identity=25.1948051948052, Blast_Score=103, Evalue=4e-22, Organism=Homo sapiens, GI66346737, Length=397, Percent_Identity=25.9445843828715, Blast_Score=93, Evalue=7e-19, Organism=Homo sapiens, GI119393895, Length=407, Percent_Identity=22.8501228501229, Blast_Score=88, Evalue=3e-17, Organism=Homo sapiens, GI119393893, Length=407, Percent_Identity=22.8501228501229, Blast_Score=88, Evalue=3e-17, Organism=Homo sapiens, GI119393891, Length=407, Percent_Identity=22.8501228501229, Blast_Score=88, Evalue=3e-17, Organism=Homo sapiens, GI221316699, Length=238, Percent_Identity=27.7310924369748, Blast_Score=77, Evalue=5e-14, Organism=Homo sapiens, GI310115361, Length=236, Percent_Identity=28.8135593220339, Blast_Score=77, Evalue=6e-14, Organism=Escherichia coli, GI2367323, Length=678, Percent_Identity=97.6401179941003, Blast_Score=1392, Evalue=0.0, Organism=Escherichia coli, GI2367256, Length=550, Percent_Identity=24.5454545454545, Blast_Score=176, Evalue=6e-45, Organism=Caenorhabditis elegans, GI17560800, Length=380, Percent_Identity=23.1578947368421, Blast_Score=105, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17560798, Length=380, Percent_Identity=23.1578947368421, Blast_Score=105, Evalue=1e-22, Organism=Caenorhabditis elegans, GI71991189, Length=342, Percent_Identity=24.8538011695906, Blast_Score=95, Evalue=1e-19, Organism=Caenorhabditis elegans, GI32563849, Length=231, Percent_Identity=30.7359307359307, Blast_Score=83, Evalue=4e-16, Organism=Caenorhabditis elegans, GI71985706, Length=237, Percent_Identity=28.6919831223629, Blast_Score=80, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6319706, Length=381, Percent_Identity=22.5721784776903, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24650054, Length=345, Percent_Identity=25.7971014492754, Blast_Score=102, Evalue=9e-22, Organism=Drosophila melanogaster, GI24643749, Length=357, Percent_Identity=24.0896358543417, Blast_Score=83, Evalue=7e-16, Organism=Drosophila melanogaster, GI24643753, Length=357, Percent_Identity=24.0896358543417, Blast_Score=83, Evalue=7e-16, Organism=Drosophila melanogaster, GI24643751, Length=357, Percent_Identity=24.0896358543417, Blast_Score=83, Evalue=7e-16, Organism=Drosophila melanogaster, GI24643746, Length=357, Percent_Identity=24.0896358543417, Blast_Score=83, Evalue=7e-16, Organism=Drosophila melanogaster, GI21357605, Length=357, Percent_Identity=24.0896358543417, Blast_Score=83, Evalue=7e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011013 - InterPro: IPR000322 - InterPro: IPR017853 [H]
Pfam domain/function: PF01055 Glyco_hydro_31 [H]
EC number: =3.2.1.20 [H]
Molecular weight: Translated: 77378; Mature: 77378
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTPRPQLPDFEFHQNNDSFTLHFRQRLILTHSKDNPCLWIGSGIADIDMFRGNFSIKDK CCCCCCCCCCCCEECCCCCEEEEEEEEEEEEECCCCCEEEEECCCCEEEEECCCCCHHHH LQEKIALTDAIVSQSPDGWLIHFSRGSDISATLNISADDQGRLLLELQNDNLNHNRIWLR HHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCCCCCEEEEEECCCCCCCEEEEE LAAQPEDHIYGCGEQFSYFDLRGKPFPLWTSEQGVGRNKQTYVTWQADCKENAGGDYYWT EECCCCCCEEECCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEE FFPQPTFVSTQKYYCHVDNSCYMNFDFSAPEYHELALWEDKATLRFECADTYISLLEKLT ECCCCCEEECCEEEEEECCEEEEEECCCCCCCEEEEEEECCCEEEEEEHHHHHHHHHHHH ALLGRQPELPDWIYDGVTLGIQGGTEVCQKKLDTMRNAGVKVNGIWAQDWSGIRMTSFGK HHHCCCCCCCCHHHCCEEEEECCCHHHHHHHHHHHHHCCEEEEEEEECCCCCCEEECCCC RVMWNWKWNSENYPQLDSRIKQWNKEGVQFLAYINPYVASDKDLCEEAAKRGYLAKDVAG EEEEEEEECCCCCCHHHHHHHHHCHHHEEEEEEECCCCCCCHHHHHHHHHCCCEEEECCC GDYLVEFGEFYGGVVDLTNPEAYAWFKEVIKKNMIELGCGGWMADFGEYLPTDTYLHNGI CHHEEEHHHHCCCEEECCCCHHHHHHHHHHHHHHHEECCCCHHHHHHHHCCCCHHHHCCC SAEIMHNAWPALWAKCNYEALEETGKLGEILFFMRAGSTGSQKYSTMMWAGDQNVDWSLD CHHHHHCCCHHHHHCCCHHHHHHCCCCEEEEEEEECCCCCCCCEEEEEEECCCCCCCCCC DGLASVVPAALSLAMTGHGLHHSDIGGYTTLFEMKRSKELLLRWCDFSAFTPMMRTHEGN CCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHCCCHHHHCCCC RPGDNWQFDGDAETIAHFARMTTVFTTLKPYLKEAVALNAKSGLPVMRPLFLHYEDDAQT CCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEEEECCCCEE YSLKYQYLLGRDILVAPVHEEGRSDWTLYLPEDNWVHAWTGETFHGGEITVEAPIGKPPV EEEEEEEEECCCEEEEECCCCCCCCEEEECCCCCEEEEECCCEEECCEEEEECCCCCCCE FYRADSEWAALFASLKNI EEECCCHHHHHHHHHHCC >Mature Secondary Structure MDTPRPQLPDFEFHQNNDSFTLHFRQRLILTHSKDNPCLWIGSGIADIDMFRGNFSIKDK CCCCCCCCCCCCEECCCCCEEEEEEEEEEEEECCCCCEEEEECCCCEEEEECCCCCHHHH LQEKIALTDAIVSQSPDGWLIHFSRGSDISATLNISADDQGRLLLELQNDNLNHNRIWLR HHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECCCCCCCEEEEEECCCCCCCEEEEE LAAQPEDHIYGCGEQFSYFDLRGKPFPLWTSEQGVGRNKQTYVTWQADCKENAGGDYYWT EECCCCCCEEECCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEE FFPQPTFVSTQKYYCHVDNSCYMNFDFSAPEYHELALWEDKATLRFECADTYISLLEKLT ECCCCCEEECCEEEEEECCEEEEEECCCCCCCEEEEEEECCCEEEEEEHHHHHHHHHHHH ALLGRQPELPDWIYDGVTLGIQGGTEVCQKKLDTMRNAGVKVNGIWAQDWSGIRMTSFGK HHHCCCCCCCCHHHCCEEEEECCCHHHHHHHHHHHHHCCEEEEEEEECCCCCCEEECCCC RVMWNWKWNSENYPQLDSRIKQWNKEGVQFLAYINPYVASDKDLCEEAAKRGYLAKDVAG EEEEEEEECCCCCCHHHHHHHHHCHHHEEEEEEECCCCCCCHHHHHHHHHCCCEEEECCC GDYLVEFGEFYGGVVDLTNPEAYAWFKEVIKKNMIELGCGGWMADFGEYLPTDTYLHNGI CHHEEEHHHHCCCEEECCCCHHHHHHHHHHHHHHHEECCCCHHHHHHHHCCCCHHHHCCC SAEIMHNAWPALWAKCNYEALEETGKLGEILFFMRAGSTGSQKYSTMMWAGDQNVDWSLD CHHHHHCCCHHHHHCCCHHHHHHCCCCEEEEEEEECCCCCCCCEEEEEEECCCCCCCCCC DGLASVVPAALSLAMTGHGLHHSDIGGYTTLFEMKRSKELLLRWCDFSAFTPMMRTHEGN CCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHCCCHHHHCCCC RPGDNWQFDGDAETIAHFARMTTVFTTLKPYLKEAVALNAKSGLPVMRPLFLHYEDDAQT CCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEEEECCCCEE YSLKYQYLLGRDILVAPVHEEGRSDWTLYLPEDNWVHAWTGETFHGGEITVEAPIGKPPV EEEEEEEEECCCEEEEECCCCCCCCEEEECCCCCEEEEECCCEEECCEEEEECCCCCCCE FYRADSEWAALFASLKNI EEECCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8346018; 9278503 [H]