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The map label for this gene is matA [H]

Identifier: 209398384

GI number: 209398384

Start: 347034

End: 347576

Strand: Reverse

Name: matA [H]

Synonym: ECH74115_0340

Alternate gene names: 209398384

Gene position: 347576-347034 (Counterclockwise)

Preceding gene: 209397089

Following gene: 209398971

Centisome position: 6.24

GC content: 39.23

Gene sequence:

>543_bases
ATGGAATGTCAAAACCGTTCTGATAAATACATCTGGTCTCCCCATGACGCCTACTTCTATAAAGGACTATCTGAACTGAT
TGTGGATATCGACAGATTAATTTATCTATCGCTGGAGAAAATCAGAAAAGATTTCGTGTTTATCAATCTCAATACGGATT
CTTTAACTGAATTTATAAACCGTGATAATGAGTGGTTATCCGCGGTAAAGGGGAAACAGGTCGTATTGATTGCGGCCAGA
AAGTCAGAAGCCTTAGCAAATTATTGGTATTACAACAGCAATATTAGGGGCGTGGTATACGCTGGACTGAGTCGTGATAT
TAGAAAAGAACTGGCCTATGTGATTAATGGCAGGTTCCTGAGAAAAGATATTAAGAAAGATAAAATCACTGACCGGGAAA
TGGAAATTATCCGCATGACGGCTCAGGGAATGCTGCCTAAATCGATTGCCAGAATTGAAAATTGTAGTGTAAAGACAGTG
TATACCCATCGGCGTAATGCAGAGGCCAAGCTGTACTCAAAATTATATAAGTTGGTTCAGTAA

Upstream 100 bases:

>100_bases
GATTTACTAAAGAAACTGAATGTACCTGTAAAAATTACAGGTTTGGAAAGTAGTGACATGGCAAAATGATTACAGCAGGG
ACTATGAGGTTGAAAACCAT

Downstream 100 bases:

>100_bases
ACTCCAGGCAAGTTAGTTTTAAAAAATGACTCACTGGGACATCACGTCCTCAATTCAACTCGGGAAGAAATACAATGAAA
AAAAAGGTTCTGGCAATAGC

Product: fimbrillin MatA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MECQNRSDKYIWSPHDAYFYKGLSELIVDIDRLIYLSLEKIRKDFVFINLNTDSLTEFINRDNEWLSAVKGKQVVLIAAR
KSEALANYWYYNSNIRGVVYAGLSRDIRKELAYVINGRFLRKDIKKDKITDREMEIIRMTAQGMLPKSIARIENCSVKTV
YTHRRNAEAKLYSKLYKLVQ

Sequences:

>Translated_180_residues
MECQNRSDKYIWSPHDAYFYKGLSELIVDIDRLIYLSLEKIRKDFVFINLNTDSLTEFINRDNEWLSAVKGKQVVLIAAR
KSEALANYWYYNSNIRGVVYAGLSRDIRKELAYVINGRFLRKDIKKDKITDREMEIIRMTAQGMLPKSIARIENCSVKTV
YTHRRNAEAKLYSKLYKLVQ
>Mature_180_residues
MECQNRSDKYIWSPHDAYFYKGLSELIVDIDRLIYLSLEKIRKDFVFINLNTDSLTEFINRDNEWLSAVKGKQVVLIAAR
KSEALANYWYYNSNIRGVVYAGLSRDIRKELAYVINGRFLRKDIKKDKITDREMEIIRMTAQGMLPKSIARIENCSVKTV
YTHRRNAEAKLYSKLYKLVQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH luxR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI2367106, Length=180, Percent_Identity=97.2222222222222, Blast_Score=359, Evalue=1e-101,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016032
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE [H]

EC number: NA

Molecular weight: Translated: 21231; Mature: 21231

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MECQNRSDKYIWSPHDAYFYKGLSELIVDIDRLIYLSLEKIRKDFVFINLNTDSLTEFIN
CCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECHHHHHHHHC
RDNEWLSAVKGKQVVLIAARKSEALANYWYYNSNIRGVVYAGLSRDIRKELAYVINGRFL
CCHHHHHHHCCCEEEEEEECCCHHHHHHEEECCCCCEEEEECCCHHHHHHHHHHHCCHHH
RKDIKKDKITDREMEIIRMTAQGMLPKSIARIENCSVKTVYTHRRNAEAKLYSKLYKLVQ
HHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHC
>Mature Secondary Structure
MECQNRSDKYIWSPHDAYFYKGLSELIVDIDRLIYLSLEKIRKDFVFINLNTDSLTEFIN
CCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECHHHHHHHHC
RDNEWLSAVKGKQVVLIAARKSEALANYWYYNSNIRGVVYAGLSRDIRKELAYVINGRFL
CCHHHHHHHCCCEEEEEEECCCHHHHHHEEECCCCCEEEEECCCHHHHHHHHHHHCCHHH
RKDIKKDKITDREMEIIRMTAQGMLPKSIARIENCSVKTVYTHRRNAEAKLYSKLYKLVQ
HHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA