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The map label for this gene is rpmJ

Identifier: 209397089

GI number: 209397089

Start: 348662

End: 348802

Strand: Reverse

Name: rpmJ

Synonym: ECH74115_0341

Alternate gene names: 209397089

Gene position: 348802-348662 (Counterclockwise)

Preceding gene: 209398292

Following gene: 209398384

Centisome position: 6.26

GC content: 43.26

Gene sequence:

>141_bases
ATGAAAGTCCTTAACTCTCTGCGTACCGCAAAAGAACGCCATCCAGACTGTCAGATTGTGAAGCGAAAAGGACGGCTATA
TGTGATTTGTAAATCTAATCCACGCTTTAAGGCCGTTCAGGGTCGTAAGAAAAAACGTTGA

Upstream 100 bases:

>100_bases
CGTTCTATACAGGGAAGCTGAGAACAGTGGCATCAGAAGGAAATGTTGCACGATTCACCCAACGTTTTGGTCGTTTTGTT
AGCACGAAAAAGGGGGCGTG

Downstream 100 bases:

>100_bases
TTTAAAATTCGACGAATTAACGATATTTGTCTGATTAATAATCAGACCGGATTAATGTTGGTGTATTTATTACACCAGCA
TTAATTTTCCTGGGGATGTA

Product: 50S ribosomal protein L36

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 46; Mature: 46

Protein sequence:

>46_residues
MKVLNSLRTAKERHPDCQIVKRKGRLYVICKSNPRFKAVQGRKKKR

Sequences:

>Translated_46_residues
MKVLNSLRTAKERHPDCQIVKRKGRLYVICKSNPRFKAVQGRKKKR
>Mature_46_residues
MKVLNSLRTAKERHPDCQIVKRKGRLYVICKSNPRFKAVQGRKKKR

Specific function: Unknown

COG id: COG0257

COG function: function code J; Ribosomal protein L36

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L36P family

Homologues:

Organism=Escherichia coli, GI87081713, Length=46, Percent_Identity=100, Blast_Score=94, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL362_ECO24 (A7ZI30)

Other databases:

- EMBL:   CP000800
- RefSeq:   YP_001461459.1
- ProteinModelPortal:   A7ZI30
- SMR:   A7ZI30
- STRING:   A7ZI30
- EnsemblBacteria:   EBESCT00000021844
- GeneID:   5586687
- GenomeReviews:   CP000800_GR
- KEGG:   ecw:EcE24377A_0306
- eggNOG:   COG0257
- GeneTree:   EBGT00050000012103
- HOGENOM:   HBG734088
- ProtClustDB:   PRK00831
- BioCyc:   ECOL331111:ECE24377A_0306-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00251
- InterPro:   IPR000473
- PANTHER:   PTHR18804
- TIGRFAMs:   TIGR01022

Pfam domain/function: PF00444 Ribosomal_L36; SSF57840 Ribosomal_L36

EC number: NA

Molecular weight: Translated: 5467; Mature: 5467

Theoretical pI: Translated: 11.97; Mature: 11.97

Prosite motif: PS00828 RIBOSOMAL_L36

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLNSLRTAKERHPDCQIVKRKGRLYVICKSNPRFKAVQGRKKKR
CCHHHHHHHHHHCCCCCEEEECCCCEEEEECCCCCEECCCCCCCCC
>Mature Secondary Structure
MKVLNSLRTAKERHPDCQIVKRKGRLYVICKSNPRFKAVQGRKKKR
CCHHHHHHHHHHCCCCCEEEECCCCEEEEECCCCCEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA