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The map label for this gene is ydiU [H]

Identifier: 209398355

GI number: 209398355

Start: 2295816

End: 2297252

Strand: Reverse

Name: ydiU [H]

Synonym: ECH74115_2424

Alternate gene names: 209398355

Gene position: 2297252-2295816 (Counterclockwise)

Preceding gene: 209397587

Following gene: 209399132

Centisome position: 41.23

GC content: 51.98

Gene sequence:

>1437_bases
ATGACCCTGTCTTTTATTACCCGCTGGCGCGATGAATTGCCAGAAACCTATACAGCACTTTCCCCTACGCCTTTAAATAA
TGCCCGGCTGATTTGGCATAATACCGAACTCGCTAACACGCTGAGTATTCCATCGTCGCTGTTTAAAAATGGCGCAGGTG
TCTGGGGCGGCGAAACCCTACTGCCTGGTATGTCACCACTGGCGCAGGTTTACAGTGGTCATCAGTTCGGCGTCTGGGCG
GGCCAACTGGGTGATGGGCGCGGCATTTTACTTGGCGAACAACTGCTTGCTGATGGCACTACAATGGACTGGCATCTGAA
AGGTGCTGGCCTGACGCCTTATTCGCGAATGGGTGATGGACGGGCGGTATTACGTTCGACGATACGAGAAAGTCTCGCCA
GTGAGGCGATGCATTATCTGGGCATTCCGACGACCCGCGCGTTAAGTATCGTCACCAGCGATTCGCCAGTGTATCGGGAA
ACGGTGGAGCCAGGCGCGATGCTGATGCGTGTGGCACCAAGTCATCTGCGCTTTGGTCATTTCGAACATTTTTACTATCG
CCGCGAGCCGGATAAGGTTCGTCAGTTGGCTGACTTTGCCATTCGTCATTACTGGTCACATCTTGAAGATGATGAGGACA
AATACCGTCTCTGGTTTAACGATGTTGTCGCACGTACCGCATCGTTAATTGCCCAATGGCAGACGGTCGGCTTTGCACAT
GGGGTGATGAATACCGACAACATGTCGCTGCTGGGACTGACGCTTGATTACGGGCCGTTTGGTTTTCTTAATGATTACGA
ACCCGGTTTTATTTGTAATCACTCGGATCATCAAGGACGTTACAGCTTTGACAATCAACCTGCTGTCGCGTTGTGGATTT
TACAGCGTCTGGCGCAGACATTGTCACCATTTGTTGCCGTAGATGCCCTGAATGAGGCCCTGGACAGCTATCAGCAGGTT
TTGTTGACGCATTATGGACAACGGATGCGGCAGAAACTGGGCTTTATGACGGAGCAAAAAGAGGATAACGCGCTACTGAA
TGAATTATTCAGTCTGATGGCGCGAGAGCGCAGCGATTATACCCGCACATTTCGCATGCTGAGTCTGACCGAGCAGCACA
GCGCGGCGTCACCGCTACGTGATGAGTTTATTGATCGTGCGGCATTTGATGACTGGTTTGCCCGTTATCGAGGGCGTTTG
CAACAAGACGAGGTTAGCGATAGTGAGCGTCAGCAACTGATGCAAAGCGTTAACCCCGCTCTGGTATTGCGCAACTGGTT
GGCGCAACGGGCGATTGAAGCGGCAGAAAAGGGTGATATGACGGAATTGCACCGCCTGCATGAGGCGTTGCGAAATCCTT
TCAGCGACAGAGATGATGACTATGTCAGTCGTCCACCTGACTGGGGTAAACGGCTGGAAGTCAGCTGCTCGAGTTAA

Upstream 100 bases:

>100_bases
TTCCCATAAATCAGATAACGACGTTGGTTCAGCGATAACCCTCCTGTTTGCTGGTGTTTAAGACGAGAGTAACCGTCTAC
ACTATCAAACAGGAGGCTCT

Downstream 100 bases:

>100_bases
AGGCTACTTGGTCAACAGCAGCTTGCCAGCCTGAGTTTTACGGAGCAGATATTCTTGCCCGTCATGATCGATAATCAGTT
TGCCATCCGGACCTAACAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 478; Mature: 477

Protein sequence:

>478_residues
MTLSFITRWRDELPETYTALSPTPLNNARLIWHNTELANTLSIPSSLFKNGAGVWGGETLLPGMSPLAQVYSGHQFGVWA
GQLGDGRGILLGEQLLADGTTMDWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRALSIVTSDSPVYRE
TVEPGAMLMRVAPSHLRFGHFEHFYYRREPDKVRQLADFAIRHYWSHLEDDEDKYRLWFNDVVARTASLIAQWQTVGFAH
GVMNTDNMSLLGLTLDYGPFGFLNDYEPGFICNHSDHQGRYSFDNQPAVALWILQRLAQTLSPFVAVDALNEALDSYQQV
LLTHYGQRMRQKLGFMTEQKEDNALLNELFSLMARERSDYTRTFRMLSLTEQHSAASPLRDEFIDRAAFDDWFARYRGRL
QQDEVSDSERQQLMQSVNPALVLRNWLAQRAIEAAEKGDMTELHRLHEALRNPFSDRDDDYVSRPPDWGKRLEVSCSS

Sequences:

>Translated_478_residues
MTLSFITRWRDELPETYTALSPTPLNNARLIWHNTELANTLSIPSSLFKNGAGVWGGETLLPGMSPLAQVYSGHQFGVWA
GQLGDGRGILLGEQLLADGTTMDWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRALSIVTSDSPVYRE
TVEPGAMLMRVAPSHLRFGHFEHFYYRREPDKVRQLADFAIRHYWSHLEDDEDKYRLWFNDVVARTASLIAQWQTVGFAH
GVMNTDNMSLLGLTLDYGPFGFLNDYEPGFICNHSDHQGRYSFDNQPAVALWILQRLAQTLSPFVAVDALNEALDSYQQV
LLTHYGQRMRQKLGFMTEQKEDNALLNELFSLMARERSDYTRTFRMLSLTEQHSAASPLRDEFIDRAAFDDWFARYRGRL
QQDEVSDSERQQLMQSVNPALVLRNWLAQRAIEAAEKGDMTELHRLHEALRNPFSDRDDDYVSRPPDWGKRLEVSCSS
>Mature_477_residues
TLSFITRWRDELPETYTALSPTPLNNARLIWHNTELANTLSIPSSLFKNGAGVWGGETLLPGMSPLAQVYSGHQFGVWAG
QLGDGRGILLGEQLLADGTTMDWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRALSIVTSDSPVYRET
VEPGAMLMRVAPSHLRFGHFEHFYYRREPDKVRQLADFAIRHYWSHLEDDEDKYRLWFNDVVARTASLIAQWQTVGFAHG
VMNTDNMSLLGLTLDYGPFGFLNDYEPGFICNHSDHQGRYSFDNQPAVALWILQRLAQTLSPFVAVDALNEALDSYQQVL
LTHYGQRMRQKLGFMTEQKEDNALLNELFSLMARERSDYTRTFRMLSLTEQHSAASPLRDEFIDRAAFDDWFARYRGRLQ
QDEVSDSERQQLMQSVNPALVLRNWLAQRAIEAAEKGDMTELHRLHEALRNPFSDRDDDYVSRPPDWGKRLEVSCSS

Specific function: Unknown

COG id: COG0397

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0061 (SELO) family [H]

Homologues:

Organism=Homo sapiens, GI32880229, Length=383, Percent_Identity=42.5587467362924, Blast_Score=290, Evalue=3e-78,
Organism=Escherichia coli, GI1787999, Length=478, Percent_Identity=97.907949790795, Blast_Score=970, Evalue=0.0,
Organism=Saccharomyces cerevisiae, GI6325034, Length=360, Percent_Identity=35.5555555555556, Blast_Score=216, Evalue=6e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003846 [H]

Pfam domain/function: PF02696 UPF0061 [H]

EC number: NA

Molecular weight: Translated: 54533; Mature: 54402

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLSFITRWRDELPETYTALSPTPLNNARLIWHNTELANTLSIPSSLFKNGAGVWGGETL
CCHHHHHHHHHHCCHHHHCCCCCCCCCCEEEEECCHHHHHHHCCHHHHHCCCCCCCCCCC
LPGMSPLAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGTTMDWHLKGAGLTPYSRMGDG
CCCCHHHHHHHCCCCCCEEECCCCCCCEEEEHHHHHHCCCCEEEEECCCCCCCHHHCCCH
RAVLRSTIRESLASEAMHYLGIPTTRALSIVTSDSPVYRETVEPGAMLMRVAPSHLRFGH
HHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEECCCCHHHHHCCCHHHHHHHCHHHHCCCC
FEHFYYRREPDKVRQLADFAIRHYWSHLEDDEDKYRLWFNDVVARTASLIAQWQTVGFAH
HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVMNTDNMSLLGLTLDYGPFGFLNDYEPGFICNHSDHQGRYSFDNQPAVALWILQRLAQT
CCCCCCCCEEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH
LSPFVAVDALNEALDSYQQVLLTHYGQRMRQKLGFMTEQKEDNALLNELFSLMARERSDY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
TRTFRMLSLTEQHSAASPLRDEFIDRAAFDDWFARYRGRLQQDEVSDSERQQLMQSVNPA
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHCCHH
LVLRNWLAQRAIEAAEKGDMTELHRLHEALRNPFSDRDDDYVSRPPDWGKRLEVSCSS
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECC
>Mature Secondary Structure 
TLSFITRWRDELPETYTALSPTPLNNARLIWHNTELANTLSIPSSLFKNGAGVWGGETL
CHHHHHHHHHHCCHHHHCCCCCCCCCCEEEEECCHHHHHHHCCHHHHHCCCCCCCCCCC
LPGMSPLAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGTTMDWHLKGAGLTPYSRMGDG
CCCCHHHHHHHCCCCCCEEECCCCCCCEEEEHHHHHHCCCCEEEEECCCCCCCHHHCCCH
RAVLRSTIRESLASEAMHYLGIPTTRALSIVTSDSPVYRETVEPGAMLMRVAPSHLRFGH
HHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEECCCCHHHHHCCCHHHHHHHCHHHHCCCC
FEHFYYRREPDKVRQLADFAIRHYWSHLEDDEDKYRLWFNDVVARTASLIAQWQTVGFAH
HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVMNTDNMSLLGLTLDYGPFGFLNDYEPGFICNHSDHQGRYSFDNQPAVALWILQRLAQT
CCCCCCCCEEEEEEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH
LSPFVAVDALNEALDSYQQVLLTHYGQRMRQKLGFMTEQKEDNALLNELFSLMARERSDY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
TRTFRMLSLTEQHSAASPLRDEFIDRAAFDDWFARYRGRLQQDEVSDSERQQLMQSVNPA
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHCCHH
LVLRNWLAQRAIEAAEKGDMTELHRLHEALRNPFSDRDDDYVSRPPDWGKRLEVSCSS
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA