Click here to switch to the map view.

The map label for this gene is ydiV [H]

Identifier: 209397587

GI number: 209397587

Start: 2297315

End: 2298028

Strand: Reverse

Name: ydiV [H]

Synonym: ECH74115_2425

Alternate gene names: 209397587

Gene position: 2298028-2297315 (Counterclockwise)

Preceding gene: 209396057

Following gene: 209398355

Centisome position: 41.24

GC content: 42.3

Gene sequence:

>714_bases
ATGAAGATTTTTTTGGAGAATCTTTATCATTCTGATTGCTATTTCCTGCCGATAAGAGATAACCAGCAAGTCCTTGTCGG
CGTTGAGTTAATTACCCATTTCTCCAGTGAAGATGGCACGGTGCGTATCCCGACGAGTCGGGTTATAGCGCAACTTACCG
AGGAGCAACATTGGCAATTATTTTCAGAGCAGTTGGAATTACTAAAATCATGCCAACATTTTTTTATTCAACATAAACTC
TTTGCCTGGCTTAATTTAACGCCACAAGTGGCTACATTATTATTAGAGAGGGATAATTACGCAGGCGAACTATTAAAATA
TCCGTTTATTGAACTGTTGATTAATGAGAATTACCCGCATCTCAATGAAGGAAAAGATAATCGCGGTCTTTTATCCTTAT
CGCAAGTGTATCCCCTTGTGTTAGGTAATTTGGGAGCAGGCAACAGCACAATGAAAGCGGTTTTTGATGGTCTTTTCACC
CGCGTAATGCTGGATAAAAGTTTTATTCAGCAACAAATCACGCATCGCTCCTTCGAACCGTTTATTCGTGCGATTCAGGC
GCAAATTTCCCCTTGTTGCAATTGCATCATCGCGGGGGGCATTGATACGCCAGAAATATTAGCACAGATTACCCCCTTCG
ATTTCCATGCTCTCCAGGGATGCCTGTGGCCTGCCGTTCCCATAAATCAGATAACGACGTTGGTTCAGCGATAA

Upstream 100 bases:

>100_bases
TGGAACAAATGAAAGTTACTCCTTCTGTAATTGTTATGTCTTATGGCCTCATCCCTTTTAGCCGGATACTGAAAAACATC
CTTCGAGAGGGACGGTTACC

Downstream 100 bases:

>100_bases
CCCTCCTGTTTGCTGGTGTTTAAGACGAGAGTAACCGTCTACACTATCAAACAGGAGGCTCTATGACCCTGTCTTTTATT
ACCCGCTGGCGCGATGAATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MKIFLENLYHSDCYFLPIRDNQQVLVGVELITHFSSEDGTVRIPTSRVIAQLTEEQHWQLFSEQLELLKSCQHFFIQHKL
FAWLNLTPQVATLLLERDNYAGELLKYPFIELLINENYPHLNEGKDNRGLLSLSQVYPLVLGNLGAGNSTMKAVFDGLFT
RVMLDKSFIQQQITHRSFEPFIRAIQAQISPCCNCIIAGGIDTPEILAQITPFDFHALQGCLWPAVPINQITTLVQR

Sequences:

>Translated_237_residues
MKIFLENLYHSDCYFLPIRDNQQVLVGVELITHFSSEDGTVRIPTSRVIAQLTEEQHWQLFSEQLELLKSCQHFFIQHKL
FAWLNLTPQVATLLLERDNYAGELLKYPFIELLINENYPHLNEGKDNRGLLSLSQVYPLVLGNLGAGNSTMKAVFDGLFT
RVMLDKSFIQQQITHRSFEPFIRAIQAQISPCCNCIIAGGIDTPEILAQITPFDFHALQGCLWPAVPINQITTLVQR
>Mature_237_residues
MKIFLENLYHSDCYFLPIRDNQQVLVGVELITHFSSEDGTVRIPTSRVIAQLTEEQHWQLFSEQLELLKSCQHFFIQHKL
FAWLNLTPQVATLLLERDNYAGELLKYPFIELLINENYPHLNEGKDNRGLLSLSQVYPLVLGNLGAGNSTMKAVFDGLFT
RVMLDKSFIQQQITHRSFEPFIRAIQAQISPCCNCIIAGGIDTPEILAQITPFDFHALQGCLWPAVPINQITTLVQR

Specific function: Unknown

COG id: COG2200

COG function: function code T; FOG: EAL domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

Organism=Escherichia coli, GI1788000, Length=237, Percent_Identity=99.57805907173, Blast_Score=488, Evalue=1e-139,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001633 [H]

Pfam domain/function: PF00563 EAL [H]

EC number: NA

Molecular weight: Translated: 27073; Mature: 27073

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIFLENLYHSDCYFLPIRDNQQVLVGVELITHFSSEDGTVRIPTSRVIAQLTEEQHWQL
CEEEHHHHCCCCEEEEEECCCCEEEEHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHH
FSEQLELLKSCQHFFIQHKLFAWLNLTPQVATLLLERDNYAGELLKYPFIELLINENYPH
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHEEECCCCCC
LNEGKDNRGLLSLSQVYPLVLGNLGAGNSTMKAVFDGLFTRVMLDKSFIQQQITHRSFEP
CCCCCCCCCCEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
FIRAIQAQISPCCNCIIAGGIDTPEILAQITPFDFHALQGCLWPAVPINQITTLVQR
HHHHHHHHHHHHHHEEEECCCCCHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MKIFLENLYHSDCYFLPIRDNQQVLVGVELITHFSSEDGTVRIPTSRVIAQLTEEQHWQL
CEEEHHHHCCCCEEEEEECCCCEEEEHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHHH
FSEQLELLKSCQHFFIQHKLFAWLNLTPQVATLLLERDNYAGELLKYPFIELLINENYPH
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHEEECCCCCC
LNEGKDNRGLLSLSQVYPLVLGNLGAGNSTMKAVFDGLFTRVMLDKSFIQQQITHRSFEP
CCCCCCCCCCEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
FIRAIQAQISPCCNCIIAGGIDTPEILAQITPFDFHALQGCLWPAVPINQITTLVQR
HHHHHHHHHHHHHHEEEECCCCCHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]