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The map label for this gene is insD1 [C]

Identifier: 209397975

GI number: 209397975

Start: 1526974

End: 1527879

Strand: Reverse

Name: insD1 [C]

Synonym: ECH74115_1561

Alternate gene names: 209397975

Gene position: 1527879-1526974 (Counterclockwise)

Preceding gene: 209400220

Following gene: 209395722

Centisome position: 27.42

GC content: 54.86

Gene sequence:

>906_bases
GTGGATAGCGCACGCGCCCTTATTGCCCGGGGATGGGGAGTAAGCTTAGTCAGCCGTTGTCTCCGGGTGTCGCGTGCGCA
GTTGTACGTCATTCTCAGACGAACCGATGACTGGATGGATGGCCGCCGCAGTCGTCACACTGATGATACGGATGTGCTTC
TCCGTATACACCATGTTATCGGAGAGCTGCCCACGTATGGTTATCGTCGGGTATGGGCGCTGCTTCGCAGACAGGCAGAA
CTTGATGGTATGCCTGCGATCAATGCCAAACGTGTTTACCGGATCATGCGCCAGAATGCGCTGTTGCTTGAGCGAAAACC
TACTGTACCGCCATCGAAACGGGCACATACAGGCAGAGTGGCCGTGAAAGAAAGCAATCAGCGATGGTGCTCTGACGGGT
TCGAGTTCTGCTGTGATAACGGAGAGAGACTGCGTGTCACGTTCGCGCTGGACTGCTGTGATCGTGAGGCACTGCACTGG
GCGGTGACTACCGGCGGCTTCAACAGTGAAACAGTACAGGACGTCATGCTGGGAGCGGTGGAACGCCGCTTCGGCAACGA
TCTTCCGTCGTCTCCAGTGGAGTGGCTGACGGATAATGGTTCATGCTACCGGGCTAATGAAACACGCCAGTTCGCCCGGA
TGTTGGGACTTGAACCGAAGAACACGGCGGTGCGGAGTCCGGAGAGTAACGGAATAGCAGAGAACTTCGTGAAAACGATA
AAGCGTGACTACATCAGTATCATGCCCAAACCAGACGGGTTAACGGCAGCAAAGAACCTTGCAGAGGCGTTCGAGCATTA
TAACGAATGGCATCCGCATAGTGCGCTGGGTTATCGCTCGCCACGGGAATATCTGCGGCAGCGGGCTTGTAATGGGTTAA
GTGATAACAGATGTCTGGAAATATAG

Upstream 100 bases:

>100_bases
CCGCCATGAAGCAGATTAAAGAACTCCAGCGCCTGCTCGGCAAGAAAACGATGGAAAATGAACTCCTCAAAGAAGCCGTT
GAATATGGACGGGCAAAAAA

Downstream 100 bases:

>100_bases
GGGCAAATCCAGATGGATTTATCGTAATAAAGACAACAGCCAAATAATGAAAAACATAAAATTTTATCTGCATGGCAAAG
AGATACCAGCAGAAAGAATA

Product: insertion element IS2 transposase InsD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MDSARALIARGWGVSLVSRCLRVSRAQLYVILRRTDDWMDGRRSRHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAE
LDGMPAINAKRVYRIMRQNALLLERKPTVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHW
AVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAENFVKTI
KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLEI

Sequences:

>Translated_301_residues
MDSARALIARGWGVSLVSRCLRVSRAQLYVILRRTDDWMDGRRSRHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAE
LDGMPAINAKRVYRIMRQNALLLERKPTVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHW
AVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAENFVKTI
KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLEI
>Mature_301_residues
MDSARALIARGWGVSLVSRCLRVSRAQLYVILRRTDDWMDGRRSRHTDDTDVLLRIHHVIGELPTYGYRRVWALLRRQAE
LDGMPAINAKRVYRIMRQNALLLERKPTVPPSKRAHTGRVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHW
AVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAENFVKTI
KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLEI

Specific function: Involved in the transposition of the insertion sequence is2 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1790724, Length=301, Percent_Identity=99.0033222591362, Blast_Score=620, Evalue=1e-179,
Organism=Escherichia coli, GI1789424, Length=301, Percent_Identity=99.0033222591362, Blast_Score=620, Evalue=1e-179,
Organism=Escherichia coli, GI1789224, Length=301, Percent_Identity=99.0033222591362, Blast_Score=620, Evalue=1e-179,
Organism=Escherichia coli, GI1788305, Length=301, Percent_Identity=99.0033222591362, Blast_Score=620, Evalue=1e-179,
Organism=Escherichia coli, GI1787669, Length=301, Percent_Identity=99.0033222591362, Blast_Score=620, Evalue=1e-179,
Organism=Escherichia coli, GI1786558, Length=301, Percent_Identity=99.0033222591362, Blast_Score=620, Evalue=1e-179,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR002514 [H]

Pfam domain/function: PF00665 rve; PF01527 Transposase_8 [H]

EC number: NA

Molecular weight: Translated: 34482; Mature: 34482

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSARALIARGWGVSLVSRCLRVSRAQLYVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI
CCCHHHHHHCCCCHHHHHHHHHHHHHHEEEEEECCCCHHCCCCCCCCCHHHHHHHHHHHH
GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPTVPPSKRAHTGRV
HCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCE
AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV
EEECCCCHHHHHHHHHHCCCCCEEEEEEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHH
ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAENFVKTI
HHHHCCCCCCCCHHHCCCCCCEEECHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH
KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE
HHHHHEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEC
I
C
>Mature Secondary Structure
MDSARALIARGWGVSLVSRCLRVSRAQLYVILRRTDDWMDGRRSRHTDDTDVLLRIHHVI
CCCHHHHHHCCCCHHHHHHHHHHHHHHEEEEEECCCCHHCCCCCCCCCHHHHHHHHHHHH
GELPTYGYRRVWALLRRQAELDGMPAINAKRVYRIMRQNALLLERKPTVPPSKRAHTGRV
HCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCE
AVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAV
EEECCCCHHHHHHHHHHCCCCCEEEEEEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHH
ERRFGNDLPSSPVEWLTDNGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAENFVKTI
HHHHCCCCCCCCHHHCCCCCCEEECHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH
KRDYISIMPKPDGLTAAKNLAEAFEHYNEWHPHSALGYRSPREYLRQRACNGLSDNRCLE
HHHHHEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEC
I
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA