| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is 209400220
Identifier: 209400220
GI number: 209400220
Start: 1529076
End: 1530437
Strand: Reverse
Name: 209400220
Synonym: ECH74115_1565
Alternate gene names: NA
Gene position: 1530437-1529076 (Counterclockwise)
Preceding gene: 209400194
Following gene: 209397975
Centisome position: 27.47
GC content: 40.31
Gene sequence:
>1362_bases ATGCTTCCTACATCGCAATTACGACCGACCGGGACATTCTGCTCCTATTCCGCTGAAACATCAGCAGACATCAAAAGCGA AATCACACCAATTCAGATAGAAGAAGCGCGGGCCAGTGGTCGTTTATATATCAAAGATTGTGATATTGAGTATCTGCCAC AGTTACCAAACGAAATAACATCAGTTACAATCGAAAACTGCAACAACCTGACAACCCTTACAGGATTGCCGGTTAATACA CAAAACCTCTCCGTCATTAACTGTGAAAAATTACAAATCACAGACATGCCATCAACCGTAAAAAATCTACATATTGAATT AACTGATTCACCATTTATACATTTCATATCTGAAGGCATCGAGTGCCTGACGGTTTGCCACTGCTATATATCTGGAGTGC CAGAGAGTGTCCGCTACCTTGAAATAAAAGGTAGCGCCACAGACAGCATAAAAAATGTTCCAAACGGGTTATCATCTCTC AGCATCAATAGCTATAACCCGGAGAATCAGGCCAGAATTGACAACCTGATATCACCGTCACTGAAGACGCTATCGCTGAC TGGATGTAGCAATATTATACTGCCGGAGAAACTTCCGGAGAGTGTGACATCGGTAACCATTCATGCGGAGCAGAAAACCA CGTGGAACATCGGTGTTGAAGGGATGCCTGATGGGCTGGATCTTGATTTACAAAATGTACTACTCTCTCCAGATGTAGTT AAAGCAAAAAACATCACCTTTCAGGGCAACGCTCTGGATGTGGCCTTACACTTTCGCGAGGGAGACATTGTCTATGGACT ATCTTCACCCAGAGAAAAACTTGTCAACAGCATTAAACTAGTTAACGACTTTTCCAAAAAAGATATTATAACTCAGAATA CGTTAACAAACGCAGTATGGGACCCCAGAACACCTCGCAAATATAAGCAAGATCCACTTATCAAAAGAGCATTAAATGAA CACGAAAGAGGAATAAAATTTAAACAACACTTAAAGAATCACAATAATTATAATGTTACCATGGCCGACCTTTCCGTATA CAATCGCGACAAATTATGGGCAAAAACAAGCAAGGCCGGCCTAGAGTTTCAGACATTAACACGCAATAAAACGGTTATTT TTTGTGCGGATGAGCTTGTCAACTCACTCAAACTCATAGCTAACAAGTCAGAGGGCTATGGCCAGAGTATTACCGCCAGC GAATTACGATGGATTTACCGTAATAAAGACAACAACCAAATAATGAAAAACATAAAATTTTATCTACATGGCAAAGAGAT ACCAGCAGAAAGAATATTAGATACACCAGAATGGAAAGACTATCGTCCAAAATACTCTGGTTCCACATATAAATATTCTT AA
Upstream 100 bases:
>100_bases TATTGACACCTTGGCTTTGCTGGTTGTTAAAATTAGCTTGTTGATTAGTAGTATGGATAGAACTTACTCTGTTATTTATT TCTAAAAATGGAATTTATCA
Downstream 100 bases:
>100_bases TGATACCAACTTATAACGGAATAGCATAAAAACACTTTTCATGGAGCAAAGGAGAAAACAATGCCATTTTCAATCAAAAA CAGATTTTCAAGTTCACAAG
Product: hypothetical protein
Products: NA
Alternate protein names: C Component Of Insecticidal xin Complex; T3SS Secreted Effector EspK-Homolog
Number of amino acids: Translated: 453; Mature: 453
Protein sequence:
>453_residues MLPTSQLRPTGTFCSYSAETSADIKSEITPIQIEEARASGRLYIKDCDIEYLPQLPNEITSVTIENCNNLTTLTGLPVNT QNLSVINCEKLQITDMPSTVKNLHIELTDSPFIHFISEGIECLTVCHCYISGVPESVRYLEIKGSATDSIKNVPNGLSSL SINSYNPENQARIDNLISPSLKTLSLTGCSNIILPEKLPESVTSVTIHAEQKTTWNIGVEGMPDGLDLDLQNVLLSPDVV KAKNITFQGNALDVALHFREGDIVYGLSSPREKLVNSIKLVNDFSKKDIITQNTLTNAVWDPRTPRKYKQDPLIKRALNE HERGIKFKQHLKNHNNYNVTMADLSVYNRDKLWAKTSKAGLEFQTLTRNKTVIFCADELVNSLKLIANKSEGYGQSITAS ELRWIYRNKDNNQIMKNIKFYLHGKEIPAERILDTPEWKDYRPKYSGSTYKYS
Sequences:
>Translated_453_residues MLPTSQLRPTGTFCSYSAETSADIKSEITPIQIEEARASGRLYIKDCDIEYLPQLPNEITSVTIENCNNLTTLTGLPVNT QNLSVINCEKLQITDMPSTVKNLHIELTDSPFIHFISEGIECLTVCHCYISGVPESVRYLEIKGSATDSIKNVPNGLSSL SINSYNPENQARIDNLISPSLKTLSLTGCSNIILPEKLPESVTSVTIHAEQKTTWNIGVEGMPDGLDLDLQNVLLSPDVV KAKNITFQGNALDVALHFREGDIVYGLSSPREKLVNSIKLVNDFSKKDIITQNTLTNAVWDPRTPRKYKQDPLIKRALNE HERGIKFKQHLKNHNNYNVTMADLSVYNRDKLWAKTSKAGLEFQTLTRNKTVIFCADELVNSLKLIANKSEGYGQSITAS ELRWIYRNKDNNQIMKNIKFYLHGKEIPAERILDTPEWKDYRPKYSGSTYKYS >Mature_453_residues MLPTSQLRPTGTFCSYSAETSADIKSEITPIQIEEARASGRLYIKDCDIEYLPQLPNEITSVTIENCNNLTTLTGLPVNT QNLSVINCEKLQITDMPSTVKNLHIELTDSPFIHFISEGIECLTVCHCYISGVPESVRYLEIKGSATDSIKNVPNGLSSL SINSYNPENQARIDNLISPSLKTLSLTGCSNIILPEKLPESVTSVTIHAEQKTTWNIGVEGMPDGLDLDLQNVLLSPDVV KAKNITFQGNALDVALHFREGDIVYGLSSPREKLVNSIKLVNDFSKKDIITQNTLTNAVWDPRTPRKYKQDPLIKRALNE HERGIKFKQHLKNHNNYNVTMADLSVYNRDKLWAKTSKAGLEFQTLTRNKTVIFCADELVNSLKLIANKSEGYGQSITAS ELRWIYRNKDNNQIMKNIKFYLHGKEIPAERILDTPEWKDYRPKYSGSTYKYS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51007; Mature: 51007
Theoretical pI: Translated: 7.21; Mature: 7.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPTSQLRPTGTFCSYSAETSADIKSEITPIQIEEARASGRLYIKDCDIEYLPQLPNEIT CCCCCCCCCCCCEEECCCCCCCHHHHCCCCEEEEECCCCCEEEEEECCCHHCCCCCCHHH SVTIENCNNLTTLTGLPVNTQNLSVINCEKLQITDMPSTVKNLHIELTDSPFIHFISEGI EEEECCCCCEEEEECCCCCCCCEEEEEECEEEEECCCCCCCEEEEEECCCCHHHHHHHHH ECLTVCHCYISGVPESVRYLEIKGSATDSIKNVPNGLSSLSINSYNPENQARIDNLISPS HHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHCCCCHHCCEECCCCCCHHHHHHHHCCCC LKTLSLTGCSNIILPEKLPESVTSVTIHAEQKTTWNIGVEGMPDGLDLDLQNVLLSPDVV CEEEEECCCCCCCCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCHHHHCCCCCCE KAKNITFQGNALDVALHFREGDIVYGLSSPREKLVNSIKLVNDFSKKDIITQNTLTNAVW EECCEEEECCEEEEEEEEECCCEEEECCCHHHHHHHHHHHHHCCCCCCCEECCCHHHCCC DPRTPRKYKQDPLIKRALNEHERGIKFKQHLKNHNNYNVTMADLSVYNRDKLWAKTSKAG CCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCEEEEEEEEEECCCHHEEECCCCC LEFQTLTRNKTVIFCADELVNSLKLIANKSEGYGQSITASELRWIYRNKDNNQIMKNIKF CEEEEECCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCHHHEEEEEECCCCHHHHHCEEE YLHGKEIPAERILDTPEWKDYRPKYSGSTYKYS EEECCCCCHHHCCCCCCCCCCCCCCCCCCEECC >Mature Secondary Structure MLPTSQLRPTGTFCSYSAETSADIKSEITPIQIEEARASGRLYIKDCDIEYLPQLPNEIT CCCCCCCCCCCCEEECCCCCCCHHHHCCCCEEEEECCCCCEEEEEECCCHHCCCCCCHHH SVTIENCNNLTTLTGLPVNTQNLSVINCEKLQITDMPSTVKNLHIELTDSPFIHFISEGI EEEECCCCCEEEEECCCCCCCCEEEEEECEEEEECCCCCCCEEEEEECCCCHHHHHHHHH ECLTVCHCYISGVPESVRYLEIKGSATDSIKNVPNGLSSLSINSYNPENQARIDNLISPS HHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHCCCCHHCCEECCCCCCHHHHHHHHCCCC LKTLSLTGCSNIILPEKLPESVTSVTIHAEQKTTWNIGVEGMPDGLDLDLQNVLLSPDVV CEEEEECCCCCCCCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCHHHHCCCCCCE KAKNITFQGNALDVALHFREGDIVYGLSSPREKLVNSIKLVNDFSKKDIITQNTLTNAVW EECCEEEECCEEEEEEEEECCCEEEECCCHHHHHHHHHHHHHCCCCCCCEECCCHHHCCC DPRTPRKYKQDPLIKRALNEHERGIKFKQHLKNHNNYNVTMADLSVYNRDKLWAKTSKAG CCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCCEEEEEEEEEECCCHHEEECCCCC LEFQTLTRNKTVIFCADELVNSLKLIANKSEGYGQSITASELRWIYRNKDNNQIMKNIKF CEEEEECCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCCHHHEEEEEECCCCHHHHHCEEE YLHGKEIPAERILDTPEWKDYRPKYSGSTYKYS EEECCCCCHHHCCCCCCCCCCCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA