| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is 209396340
Identifier: 209396340
GI number: 209396340
Start: 3289743
End: 3290690
Strand: Direct
Name: 209396340
Synonym: ECH74115_3568
Alternate gene names: NA
Gene position: 3289743-3290690 (Clockwise)
Preceding gene: 209399764
Following gene: 209396904
Centisome position: 59.04
GC content: 44.51
Gene sequence:
>948_bases GTGAGCGAAATTAATTATCAGGCACTGCGTGAAAAGGCAGAGAAAGCAACTAAAGGAAGCTACATCGTAGGGCATACATC TGTTAACCAACACGGCAATTTAACAGGAGTTTTTGTTTGCCAAAAATGGAAAGGAGAACCCGGTGGCGTGATTGCAGAAT GTCATGTTAACTGCCTGGTTGAAACAGATGCTCAGGCTTACGCAAACGCTGAATTTATTGCTGCCTTTAATCCAAATGTT GCGCTGGCACTGCTGGATGAACGGGAAAGAAACCAGCAATACATCAAACGCCGCGACCAGGAGAACGAGGATATTGCGCT AACGGTAGGGAAGCTGCGCGTTGAGCTTGAAGCAGCAAAATCAAAACTCAACGAGCAGCGTGAGTATTACGAGGGCGTTA TCTCGGATGGAAGTAAGCACATAGCAGAACTGGAAAAACAATGCGCCGAATGGGAGCGAAAAGCATTAAGCAACTTTGAA GAGTGTGCTGCGATGGCTGAACGTATCGAAGAGATGCAGACAAAATCTGCACCAGATTCGTTTGGCATCATCGGTGAAAA TATTCGAACACAGGATAATCGAATAACGTCAGATCCTATGTTTTGTGTGTATCAAAAGCGCGAAATCGTTGTTGATGCTG ATTATGACTATGACCGGATTGTCTGGGTTGATGAAGATGGCAATGAAGCCAATAAACTCCAAAGTCGTCGTCTCGAACTA CTTCATGAAAACTTTCGGGAGCCACCAGAAAAATGGCGGCGCGTTGCTGTGAAAGATATTGATGAATTCGTTACCTGCTG TTTCACCGAACAGGGTTGTAAAGATTACCTAGCAGTCAATGGTCACAATCTTCGATTGCCATTTATATATGTAAAAAGCG GTTTCAGGAACGCTGAATATATCGGCATAAGAAACTGGCTTGCTGGCATTCGCATCAAAGGAGAGTGA
Upstream 100 bases:
>100_bases ATCCCATAGATGAGCGAAGACGCCTGGCCGTTCAGGGTTGTCGGACTTGTGCAAGTTGCCAGGAGGATCTGGAGCTTATC AGTAAACAGAGAGGTTCGAA
Downstream 100 bases:
>100_bases TATGACCACTATAACCGATAAGAAACAGTATCCCAGCGAGCAATTTCTTAATGAGCTGATCACCAACATGGAGTTTGCTG CAAGGGCACCAGTTGAAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 315; Mature: 314
Protein sequence:
>315_residues MSEINYQALREKAEKATKGSYIVGHTSVNQHGNLTGVFVCQKWKGEPGGVIAECHVNCLVETDAQAYANAEFIAAFNPNV ALALLDERERNQQYIKRRDQENEDIALTVGKLRVELEAAKSKLNEQREYYEGVISDGSKHIAELEKQCAEWERKALSNFE ECAAMAERIEEMQTKSAPDSFGIIGENIRTQDNRITSDPMFCVYQKREIVVDADYDYDRIVWVDEDGNEANKLQSRRLEL LHENFREPPEKWRRVAVKDIDEFVTCCFTEQGCKDYLAVNGHNLRLPFIYVKSGFRNAEYIGIRNWLAGIRIKGE
Sequences:
>Translated_315_residues MSEINYQALREKAEKATKGSYIVGHTSVNQHGNLTGVFVCQKWKGEPGGVIAECHVNCLVETDAQAYANAEFIAAFNPNV ALALLDERERNQQYIKRRDQENEDIALTVGKLRVELEAAKSKLNEQREYYEGVISDGSKHIAELEKQCAEWERKALSNFE ECAAMAERIEEMQTKSAPDSFGIIGENIRTQDNRITSDPMFCVYQKREIVVDADYDYDRIVWVDEDGNEANKLQSRRLEL LHENFREPPEKWRRVAVKDIDEFVTCCFTEQGCKDYLAVNGHNLRLPFIYVKSGFRNAEYIGIRNWLAGIRIKGE >Mature_314_residues SEINYQALREKAEKATKGSYIVGHTSVNQHGNLTGVFVCQKWKGEPGGVIAECHVNCLVETDAQAYANAEFIAAFNPNVA LALLDERERNQQYIKRRDQENEDIALTVGKLRVELEAAKSKLNEQREYYEGVISDGSKHIAELEKQCAEWERKALSNFEE CAAMAERIEEMQTKSAPDSFGIIGENIRTQDNRITSDPMFCVYQKREIVVDADYDYDRIVWVDEDGNEANKLQSRRLELL HENFREPPEKWRRVAVKDIDEFVTCCFTEQGCKDYLAVNGHNLRLPFIYVKSGFRNAEYIGIRNWLAGIRIKGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36143; Mature: 36012
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEINYQALREKAEKATKGSYIVGHTSVNQHGNLTGVFVCQKWKGEPGGVIAECHVNCLV CCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEEEECCCCCCCEEEEEEEEEEE ETDAQAYANAEFIAAFNPNVALALLDERERNQQYIKRRDQENEDIALTVGKLRVELEAAK ECCHHHHCCCEEEEEECCCEEEEEECCHHHHHHHHHHCCCCCCCEEEEEEHHEEHHHHHH SKLNEQREYYEGVISDGSKHIAELEKQCAEWERKALSNFEECAAMAERIEEMQTKSAPDS HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCC FGIIGENIRTQDNRITSDPMFCVYQKREIVVDADYDYDRIVWVDEDGNEANKLQSRRLEL CCCCCCCCCCCCCCCCCCCEEEEEECCEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHH LHENFREPPEKWRRVAVKDIDEFVTCCFTEQGCKDYLAVNGHNLRLPFIYVKSGFRNAEY HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEECCCEEEEEEEEEECCCCCCEE IGIRNWLAGIRIKGE EEHHHHHCCCEEECC >Mature Secondary Structure SEINYQALREKAEKATKGSYIVGHTSVNQHGNLTGVFVCQKWKGEPGGVIAECHVNCLV CCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEEEECCCCCCCEEEEEEEEEEE ETDAQAYANAEFIAAFNPNVALALLDERERNQQYIKRRDQENEDIALTVGKLRVELEAAK ECCHHHHCCCEEEEEECCCEEEEEECCHHHHHHHHHHCCCCCCCEEEEEEHHEEHHHHHH SKLNEQREYYEGVISDGSKHIAELEKQCAEWERKALSNFEECAAMAERIEEMQTKSAPDS HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCC FGIIGENIRTQDNRITSDPMFCVYQKREIVVDADYDYDRIVWVDEDGNEANKLQSRRLEL CCCCCCCCCCCCCCCCCCCEEEEEECCEEEEECCCCCCEEEEEECCCCHHHHHHHHHHHH LHENFREPPEKWRRVAVKDIDEFVTCCFTEQGCKDYLAVNGHNLRLPFIYVKSGFRNAEY HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEECCCEEEEEEEEEECCCCCCEE IGIRNWLAGIRIKGE EEHHHHHCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA