| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
Click here to switch to the map view.
The map label for this gene is 209396904
Identifier: 209396904
GI number: 209396904
Start: 3290692
End: 3291198
Strand: Direct
Name: 209396904
Synonym: ECH74115_3569
Alternate gene names: NA
Gene position: 3290692-3291198 (Clockwise)
Preceding gene: 209396340
Following gene: 209397485
Centisome position: 59.06
GC content: 48.92
Gene sequence:
>507_bases ATGACCACTATAACCGATAAGAAACAGTATCCCAGCGAGCAATTTCTTAATGAGCTGATCACCAACATGGAGTTTGCTGC AAGGGCACCAGTTGAAGTCGTGAGAGCGATGGCAGCAGAGCTACAGAAGCGGCGCGAAGCTGATAGTGCAGAACCAGTTG CTTATATTTTCAAACATCCGGCCGGGAAATTATTCTGGGCTTTAACGGATGAAAGCAATAAAGAGCAAGCGGACGTTATT CCTGTTTATGCTGCCGCGCCTGCGTCGGTTGTGCCGGATAATGCATCAGAGCCTCTTGCTTATGCTTACAAAGAGCTTAC GCCTGAGATTATGCGCAACCATTTAGCTGTATTCGAGCGATATGGAATAGCCCCAAACGATAGCACTACCACAATTCAGG CACTGCGAATCGCGCTGGATGGTATAGAGCGGAGCGACGCCATGCTTCAGGGTAAAGGAGGGGGATATGGCTATTGCCGC AAGTTACACCATGCATCTCTACTGTGA
Upstream 100 bases:
>100_bases CTTCGATTGCCATTTATATATGTAAAAAGCGGTTTCAGGAACGCTGAATATATCGGCATAAGAAACTGGCTTGCTGGCAT TCGCATCAAAGGAGAGTGAT
Downstream 100 bases:
>100_bases TTGTCGCCAGTGTACAAATGGTAAATATCAAACGCCAGATTTCGGTGAGTATATCGGTACGTCATGGGCTGGCTGTGCAA AAGAGGCGCGCAAGGATGGC
Product: putative bacteriophage protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MTTITDKKQYPSEQFLNELITNMEFAARAPVEVVRAMAAELQKRREADSAEPVAYIFKHPAGKLFWALTDESNKEQADVI PVYAAAPASVVPDNASEPLAYAYKELTPEIMRNHLAVFERYGIAPNDSTTTIQALRIALDGIERSDAMLQGKGGGYGYCR KLHHASLL
Sequences:
>Translated_168_residues MTTITDKKQYPSEQFLNELITNMEFAARAPVEVVRAMAAELQKRREADSAEPVAYIFKHPAGKLFWALTDESNKEQADVI PVYAAAPASVVPDNASEPLAYAYKELTPEIMRNHLAVFERYGIAPNDSTTTIQALRIALDGIERSDAMLQGKGGGYGYCR KLHHASLL >Mature_167_residues TTITDKKQYPSEQFLNELITNMEFAARAPVEVVRAMAAELQKRREADSAEPVAYIFKHPAGKLFWALTDESNKEQADVIP VYAAAPASVVPDNASEPLAYAYKELTPEIMRNHLAVFERYGIAPNDSTTTIQALRIALDGIERSDAMLQGKGGGYGYCRK LHHASLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18600; Mature: 18469
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: PS00191 CYTOCHROME_B5_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTITDKKQYPSEQFLNELITNMEFAARAPVEVVRAMAAELQKRREADSAEPVAYIFKHP CCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCC AGKLFWALTDESNKEQADVIPVYAAAPASVVPDNASEPLAYAYKELTPEIMRNHLAVFER CCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHH YGIAPNDSTTTIQALRIALDGIERSDAMLQGKGGGYGYCRKLHHASLL HCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHCCC >Mature Secondary Structure TTITDKKQYPSEQFLNELITNMEFAARAPVEVVRAMAAELQKRREADSAEPVAYIFKHP CCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCC AGKLFWALTDESNKEQADVIPVYAAAPASVVPDNASEPLAYAYKELTPEIMRNHLAVFER CCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHH YGIAPNDSTTTIQALRIALDGIERSDAMLQGKGGGYGYCRKLHHASLL HCCCCCCCHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA